RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 LRRC7Q96NW7 1537 aa32.12■■■□□ 2.73
LRP3-202ENST00000590275 UBAP1LF5GYI3 381 aa32.1■■■□□ 2.73
LRP3-202ENST00000590275 SLC4A1APQ9BWU0 796 aaKnown RBP32.09■■■□□ 2.73
LRP3-202ENST00000590275 PLEKHG1Q9ULL1 1385 aa32.08■■■□□ 2.73
LRP3-202ENST00000590275 CLTCL1P53675 1640 aa32.08■■■□□ 2.73
LRP3-202ENST00000590275 FOXD1Q16676 465 aa32.08■■■□□ 2.73
LRP3-202ENST00000590275 TRPM2O94759 1503 aa32.07■■■□□ 2.72
LRP3-202ENST00000590275 ALKQ9UM73 1620 aa32.06■■■□□ 2.72
LRP3-202ENST00000590275 ADAMTS13Q76LX8 1427 aa32.01■■■□□ 2.72
LRP3-202ENST00000590275 SETD5Q9C0A6 1442 aa32.01■■■□□ 2.72
LRP3-202ENST00000590275 PPP1R15AO75807 674 aaPredicted RBP32.01■■■□□ 2.71
LRP3-202ENST00000590275 KCNA6P17658 529 aa31.99■■■□□ 2.71
LRP3-202ENST00000590275 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.99■■■□□ 2.71
LRP3-202ENST00000590275 BCANQ96GW7 911 aa31.99■■■□□ 2.71
LRP3-202ENST00000590275 MPHOSPH9Q99550 1183 aa31.98■■■□□ 2.71
LRP3-202ENST00000590275 RBM33Q96EV2 1170 aaKnown RBP31.97■■■□□ 2.71
LRP3-202ENST00000590275 HDGFP51858 240 aaKnown RBP31.96■■■□□ 2.71
LRP3-202ENST00000590275 RAB3GAP2Q9H2M9 1393 aa31.94■■■□□ 2.7
LRP3-202ENST00000590275 TBX22Q9Y458 520 aa31.94■■■□□ 2.7
LRP3-202ENST00000590275 NWD1Q149M9 1564 aa31.93■■■□□ 2.7
LRP3-202ENST00000590275 XIRP1Q702N8 1843 aaKnown RBP31.92■■■□□ 2.7
LRP3-202ENST00000590275 PIP4K2BP78356 416 aa31.92■■■□□ 2.7
LRP3-202ENST00000590275 ZNF326Q5BKZ1 582 aaKnown RBP31.92■■■□□ 2.7
LRP3-202ENST00000590275 NEXMIFQ5QGS0 1516 aa31.91■■■□□ 2.7
LRP3-202ENST00000590275 TMEM94Q12767 1356 aa31.91■■■□□ 2.7
LRP3-202ENST00000590275 TOM1O60784 492 aa31.89■■■□□ 2.7
LRP3-202ENST00000590275 NRXN3Q9Y4C0 1643 aa31.89■■■□□ 2.7
LRP3-202ENST00000590275 PTPRUQ92729 1446 aa31.86■■■□□ 2.69
LRP3-202ENST00000590275 PROSER2Q86WR7 435 aaPredicted RBP31.85■■■□□ 2.69
LRP3-202ENST00000590275 SCAF1Q9H7N4 1312 aaKnown RBP31.84■■■□□ 2.69
LRP3-202ENST00000590275 NKTRP30414 1462 aaKnown RBP31.84■■■□□ 2.69
LRP3-202ENST00000590275 CHD2O14647 1828 aaKnown RBP31.82■■■□□ 2.68
LRP3-202ENST00000590275 SETBP1Q9Y6X0 1596 aa31.82■■■□□ 2.68
LRP3-202ENST00000590275 DIP2AQ14689 1571 aa31.81■■■□□ 2.68
LRP3-202ENST00000590275 HSPA1LP34931 641 aa31.8■■■□□ 2.68
LRP3-202ENST00000590275 KIF1BO60333 1816 aa31.79■■■□□ 2.68
LRP3-202ENST00000590275 METP08581 1390 aa31.79■■■□□ 2.68
LRP3-202ENST00000590275 SPATA31E1Q6ZUB1 1445 aa31.77■■■□□ 2.68
LRP3-202ENST00000590275 PIK3R4Q99570 1358 aa31.76■■■□□ 2.67
LRP3-202ENST00000590275 CCDC144AA2RUR9 1427 aa31.75■■■□□ 2.67
LRP3-202ENST00000590275 AMOTL2Q9Y2J4 779 aa31.74■■■□□ 2.67
LRP3-202ENST00000590275 RPGRIP1LQ68CZ1 1315 aa31.71■■■□□ 2.67
LRP3-202ENST00000590275 RGL3Q3MIN7 710 aa31.7■■■□□ 2.67
LRP3-202ENST00000590275 ACIN1Q9UKV3 1341 aaKnown RBP31.68■■■□□ 2.66
LRP3-202ENST00000590275 VGFO15240 615 aaPredicted RBP31.67■■■□□ 2.66
LRP3-202ENST00000590275 ADGRF5Q8IZF2 1346 aa31.67■■■□□ 2.66
LRP3-202ENST00000590275 XRN1Q8IZH2 1706 aaKnown RBP31.66■■■□□ 2.66
LRP3-202ENST00000590275 HRCP23327 699 aa31.66■■■□□ 2.66
LRP3-202ENST00000590275 PPLO60437 1756 aa31.66■■■□□ 2.66
LRP3-202ENST00000590275 SETD1AO15047 1707 aaKnown RBP31.63■■■□□ 2.65
LRP3-202ENST00000590275 ANKRD30BQ9BXX2 1392 aa31.63■■■□□ 2.65
LRP3-202ENST00000590275 MSH6P52701 1360 aa31.62■■■□□ 2.65
LRP3-202ENST00000590275 NCOA3Q9Y6Q9 1424 aa31.61■■■□□ 2.65
LRP3-202ENST00000590275 FAM135BQ49AJ0 1406 aa31.6■■■□□ 2.65
LRP3-202ENST00000590275 IFT172Q9UG01 1749 aa31.56■■■□□ 2.64
LRP3-202ENST00000590275 SLAIN2Q9P270 581 aa31.55■■■□□ 2.64
LRP3-202ENST00000590275 C14orf37Q86TY3 774 aa31.53■■■□□ 2.64
LRP3-202ENST00000590275 C19orf44Q9H6X5 657 aa31.53■■■□□ 2.64
LRP3-202ENST00000590275 ROBO2Q9HCK4 1378 aa31.53■■■□□ 2.64
LRP3-202ENST00000590275 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.52■■■□□ 2.64
LRP3-202ENST00000590275 ROBO1Q9Y6N7 1651 aa31.51■■■□□ 2.64
LRP3-202ENST00000590275 DISP3Q9P2K9 1392 aa31.51■■■□□ 2.63
LRP3-202ENST00000590275 PIK3C2GO75747 1445 aa31.49■■■□□ 2.63
LRP3-202ENST00000590275 ASXL1Q8IXJ9 1541 aa31.49■■■□□ 2.63
LRP3-202ENST00000590275 PRAG1Q86YV5 1406 aa31.47■■■□□ 2.63
LRP3-202ENST00000590275 NRXN1Q9ULB1 1477 aa31.46■■■□□ 2.63
LRP3-202ENST00000590275 PTCH1Q13635 1447 aa31.45■■■□□ 2.63
LRP3-202ENST00000590275 TMEM132EQ6IEE7 984 aa31.44■■■□□ 2.62
LRP3-202ENST00000590275 CADPS2Q86UW7 1296 aa31.44■■■□□ 2.62
LRP3-202ENST00000590275 ATF3P18847 181 aa31.43■■■□□ 2.62
LRP3-202ENST00000590275 ADGRL3Q9HAR2 1447 aa31.42■■■□□ 2.62
LRP3-202ENST00000590275 ILDR2Q71H61 639 aa31.41■■■□□ 2.62
LRP3-202ENST00000590275 DCCP43146 1447 aa31.41■■■□□ 2.62
LRP3-202ENST00000590275 MYOM2P54296 1465 aa31.4■■■□□ 2.62
LRP3-202ENST00000590275 NALCNQ8IZF0 1738 aa31.4■■■□□ 2.62
LRP3-202ENST00000590275 MST1RQ04912 1400 aa31.4■■■□□ 2.62
LRP3-202ENST00000590275 MED1Q15648 1581 aaPredicted RBP31.39■■■□□ 2.62
LRP3-202ENST00000590275 CFAP70Q5T0N1 1121 aa31.38■■■□□ 2.61
LRP3-202ENST00000590275 C14orf93Q9H972 538 aaKnown RBP31.38■■■□□ 2.61
LRP3-202ENST00000590275 STK26Q9P289 416 aa31.38■■■□□ 2.61
LRP3-202ENST00000590275 DHX57Q6P158 1386 aaKnown RBP31.38■■■□□ 2.61
LRP3-202ENST00000590275 LRPPRCP42704 1394 aaKnown RBP31.36■■■□□ 2.61
LRP3-202ENST00000590275 BRINP3Q76B58 766 aa31.36■■■□□ 2.61
LRP3-202ENST00000590275 TECPR2O15040 1411 aa31.34■■■□□ 2.61
LRP3-202ENST00000590275 PLEKHH1Q9ULM0 1364 aa31.34■■■□□ 2.61
LRP3-202ENST00000590275 WAPLQ7Z5K2 1190 aa31.33■■■□□ 2.61
LRP3-202ENST00000590275 ABCC11Q96J66 1382 aa31.31■■■□□ 2.6
LRP3-202ENST00000590275 KDM2AQ9Y2K7 1162 aa31.31■■■□□ 2.6
LRP3-202ENST00000590275 YTHDC2Q9H6S0 1430 aaKnown RBP31.31■■■□□ 2.6
LRP3-202ENST00000590275 DCAF11Q8TEB1 546 aa31.3■■■□□ 2.6
LRP3-202ENST00000590275 COL16A1Q07092 1604 aaPredicted RBP31.28■■■□□ 2.6
LRP3-202ENST00000590275 PHLPP1O60346 1717 aa31.27■■■□□ 2.6
LRP3-202ENST00000590275 DDX17Q92841 729 aaKnown RBP31.26■■■□□ 2.59
LRP3-202ENST00000590275 AHDC1Q5TGY3 1603 aaPredicted RBP31.26■■■□□ 2.59
LRP3-202ENST00000590275 C1orf167Q5SNV9 1468 aa31.26■■■□□ 2.59
LRP3-202ENST00000590275 ADGRB1O14514 1584 aa31.23■■■□□ 2.59
LRP3-202ENST00000590275 KNDC1Q76NI1 1749 aa31.22■■■□□ 2.59
LRP3-202ENST00000590275 ORAI2Q96SN7 254 aa31.21■■■□□ 2.59
LRP3-202ENST00000590275 LAMC1P11047 1609 aa31.18■■■□□ 2.58
LRP3-202ENST00000590275 RGS17Q9UGC6 210 aaPredicted RBP31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms