RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 CHGAP10645 457 aaKnown RBP27.33■■□□□ 1.97
DDX39A-212ENST00000590260 FOXD1Q16676 465 aa27.32■■□□□ 1.96
DDX39A-212ENST00000590260 RAB3GAP2Q9H2M9 1393 aa27.31■■□□□ 1.96
DDX39A-212ENST00000590260 PLEKHG1Q9ULL1 1385 aa27.29■■□□□ 1.96
DDX39A-212ENST00000590260 SLC26A8Q96RN1 970 aa27.28■■□□□ 1.96
DDX39A-212ENST00000590260 LRRC7Q96NW7 1537 aa27.27■■□□□ 1.96
DDX39A-212ENST00000590260 NUTM2DQ5VT03 806 aaPredicted RBP27.27■■□□□ 1.96
DDX39A-212ENST00000590260 MPHOSPH9Q99550 1183 aa27.27■■□□□ 1.96
DDX39A-212ENST00000590260 SENP3Q9H4L4 574 aaPredicted RBP27.27■■□□□ 1.96
DDX39A-212ENST00000590260 KIF1BO60333 1816 aa27.25■■□□□ 1.95
DDX39A-212ENST00000590260 NEXMIFQ5QGS0 1516 aa27.25■■□□□ 1.95
DDX39A-212ENST00000590260 XIRP1Q702N8 1843 aaKnown RBP27.25■■□□□ 1.95
DDX39A-212ENST00000590260 ADAMTS13Q76LX8 1427 aa27.24■■□□□ 1.95
DDX39A-212ENST00000590260 ALKQ9UM73 1620 aa27.23■■□□□ 1.95
DDX39A-212ENST00000590260 NRXN3Q9Y4C0 1643 aa27.23■■□□□ 1.95
DDX39A-212ENST00000590260 NWD1Q149M9 1564 aa27.22■■□□□ 1.95
DDX39A-212ENST00000590260 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.2■■□□□ 1.94
DDX39A-212ENST00000590260 CHD2O14647 1828 aaKnown RBP27.18■■□□□ 1.94
DDX39A-212ENST00000590260 PPP1R15AO75807 674 aaPredicted RBP27.18■■□□□ 1.94
DDX39A-212ENST00000590260 HDGFP51858 240 aaKnown RBP27.16■■□□□ 1.94
DDX39A-212ENST00000590260 SETBP1Q9Y6X0 1596 aa27.16■■□□□ 1.94
DDX39A-212ENST00000590260 DIP2AQ14689 1571 aa27.14■■□□□ 1.94
DDX39A-212ENST00000590260 KCNA6P17658 529 aa27.14■■□□□ 1.94
DDX39A-212ENST00000590260 TBX22Q9Y458 520 aa27.14■■□□□ 1.94
DDX39A-212ENST00000590260 UBAP1LF5GYI3 381 aa27.13■■□□□ 1.93
DDX39A-212ENST00000590260 ZNF326Q5BKZ1 582 aaKnown RBP27.13■■□□□ 1.93
DDX39A-212ENST00000590260 BCANQ96GW7 911 aa27.13■■□□□ 1.93
DDX39A-212ENST00000590260 SPATA31E1Q6ZUB1 1445 aa27.12■■□□□ 1.93
DDX39A-212ENST00000590260 PPLO60437 1756 aa27.12■■□□□ 1.93
DDX39A-212ENST00000590260 ACIN1Q9UKV3 1341 aaKnown RBP27.11■■□□□ 1.93
DDX39A-212ENST00000590260 PTPRUQ92729 1446 aa27.1■■□□□ 1.93
DDX39A-212ENST00000590260 NKTRP30414 1462 aaKnown RBP27.1■■□□□ 1.93
DDX39A-212ENST00000590260 CCDC144AA2RUR9 1427 aa27.09■■□□□ 1.93
DDX39A-212ENST00000590260 HRCP23327 699 aa27.09■■□□□ 1.93
DDX39A-212ENST00000590260 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
DDX39A-212ENST00000590260 IFT172Q9UG01 1749 aa27.07■■□□□ 1.92
DDX39A-212ENST00000590260 TMEM94Q12767 1356 aa27.07■■□□□ 1.92
DDX39A-212ENST00000590260 RBM33Q96EV2 1170 aaKnown RBP27.06■■□□□ 1.92
DDX39A-212ENST00000590260 XRN1Q8IZH2 1706 aaKnown RBP27.04■■□□□ 1.92
DDX39A-212ENST00000590260 METP08581 1390 aa27.03■■□□□ 1.92
DDX39A-212ENST00000590260 PIK3R4Q99570 1358 aa27.03■■□□□ 1.92
DDX39A-212ENST00000590260 ANKRD30BQ9BXX2 1392 aa27.02■■□□□ 1.92
DDX39A-212ENST00000590260 RPGRIP1LQ68CZ1 1315 aa27.02■■□□□ 1.92
DDX39A-212ENST00000590260 PROSER2Q86WR7 435 aaPredicted RBP27.01■■□□□ 1.91
DDX39A-212ENST00000590260 TOM1O60784 492 aa26.98■■□□□ 1.91
DDX39A-212ENST00000590260 PIP4K2BP78356 416 aa26.97■■□□□ 1.91
DDX39A-212ENST00000590260 RGL3Q3MIN7 710 aa26.96■■□□□ 1.91
DDX39A-212ENST00000590260 ADGRF5Q8IZF2 1346 aa26.95■■□□□ 1.91
DDX39A-212ENST00000590260 VGFO15240 615 aaPredicted RBP26.95■■□□□ 1.9
DDX39A-212ENST00000590260 AMOTL2Q9Y2J4 779 aa26.95■■□□□ 1.9
DDX39A-212ENST00000590260 ASXL1Q8IXJ9 1541 aa26.89■■□□□ 1.89
DDX39A-212ENST00000590260 NCOA3Q9Y6Q9 1424 aa26.89■■□□□ 1.89
DDX39A-212ENST00000590260 SCAF1Q9H7N4 1312 aaKnown RBP26.89■■□□□ 1.89
DDX39A-212ENST00000590260 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.87■■□□□ 1.89
DDX39A-212ENST00000590260 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
DDX39A-212ENST00000590260 HSPA1LP34931 641 aa26.87■■□□□ 1.89
DDX39A-212ENST00000590260 PIK3C2GO75747 1445 aa26.87■■□□□ 1.89
DDX39A-212ENST00000590260 MSH6P52701 1360 aa26.84■■□□□ 1.89
DDX39A-212ENST00000590260 PRAG1Q86YV5 1406 aa26.84■■□□□ 1.89
DDX39A-212ENST00000590260 MYOM2P54296 1465 aa26.84■■□□□ 1.89
DDX39A-212ENST00000590260 ROBO1Q9Y6N7 1651 aa26.82■■□□□ 1.88
DDX39A-212ENST00000590260 NALCNQ8IZF0 1738 aa26.82■■□□□ 1.88
DDX39A-212ENST00000590260 ROBO2Q9HCK4 1378 aa26.81■■□□□ 1.88
DDX39A-212ENST00000590260 FAM135BQ49AJ0 1406 aa26.81■■□□□ 1.88
DDX39A-212ENST00000590260 PTCH1Q13635 1447 aa26.8■■□□□ 1.88
DDX39A-212ENST00000590260 DHX57Q6P158 1386 aaKnown RBP26.79■■□□□ 1.88
DDX39A-212ENST00000590260 C19orf44Q9H6X5 657 aa26.76■■□□□ 1.87
DDX39A-212ENST00000590260 ADGRL3Q9HAR2 1447 aa26.74■■□□□ 1.87
DDX39A-212ENST00000590260 TMEM132EQ6IEE7 984 aa26.74■■□□□ 1.87
DDX39A-212ENST00000590260 SLAIN2Q9P270 581 aa26.74■■□□□ 1.87
DDX39A-212ENST00000590260 KNDC1Q76NI1 1749 aa26.73■■□□□ 1.87
DDX39A-212ENST00000590260 C14orf93Q9H972 538 aaKnown RBP26.73■■□□□ 1.87
DDX39A-212ENST00000590260 TECPR2O15040 1411 aa26.73■■□□□ 1.87
DDX39A-212ENST00000590260 TRIM26Q12899 539 aaPredicted RBP26.72■■□□□ 1.87
DDX39A-212ENST00000590260 C14orf37Q86TY3 774 aa26.72■■□□□ 1.87
DDX39A-212ENST00000590260 DCCP43146 1447 aa26.72■■□□□ 1.87
DDX39A-212ENST00000590260 LAMC1P11047 1609 aa26.72■■□□□ 1.87
DDX39A-212ENST00000590260 CFAP70Q5T0N1 1121 aa26.71■■□□□ 1.87
DDX39A-212ENST00000590260 LRPPRCP42704 1394 aaKnown RBP26.71■■□□□ 1.87
DDX39A-212ENST00000590260 MST1RQ04912 1400 aa26.69■■□□□ 1.86
DDX39A-212ENST00000590260 ADGRB1O14514 1584 aa26.68■■□□□ 1.86
DDX39A-212ENST00000590260 YTHDC2Q9H6S0 1430 aaKnown RBP26.68■■□□□ 1.86
DDX39A-212ENST00000590260 CADPS2Q86UW7 1296 aa26.68■■□□□ 1.86
DDX39A-212ENST00000590260 DCAF11Q8TEB1 546 aa26.67■■□□□ 1.86
DDX39A-212ENST00000590260 ABCC11Q96J66 1382 aa26.67■■□□□ 1.86
DDX39A-212ENST00000590260 KDM2AQ9Y2K7 1162 aa26.66■■□□□ 1.86
DDX39A-212ENST00000590260 PLEKHH1Q9ULM0 1364 aa26.66■■□□□ 1.86
DDX39A-212ENST00000590260 ATF3P18847 181 aa26.65■■□□□ 1.86
DDX39A-212ENST00000590260 STK26Q9P289 416 aa26.65■■□□□ 1.86
DDX39A-212ENST00000590260 WAPLQ7Z5K2 1190 aa26.63■■□□□ 1.85
DDX39A-212ENST00000590260 PHLPP1O60346 1717 aa26.62■■□□□ 1.85
DDX39A-212ENST00000590260 COL16A1Q07092 1604 aaPredicted RBP26.62■■□□□ 1.85
DDX39A-212ENST00000590260 SIN3AQ96ST3 1273 aa26.61■■□□□ 1.85
DDX39A-212ENST00000590260 MED1Q15648 1581 aaPredicted RBP26.61■■□□□ 1.85
DDX39A-212ENST00000590260 BRINP3Q76B58 766 aa26.6■■□□□ 1.85
DDX39A-212ENST00000590260 AHDC1Q5TGY3 1603 aaPredicted RBP26.6■■□□□ 1.85
DDX39A-212ENST00000590260 CDC42BPGQ6DT37 1551 aa26.58■■□□□ 1.85
DDX39A-212ENST00000590260 C1orf167Q5SNV9 1468 aa26.57■■□□□ 1.84
DDX39A-212ENST00000590260 NHSL1Q5SYE7 1610 aa26.56■■□□□ 1.84
DDX39A-212ENST00000590260 DLC1Q96QB1 1528 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms