RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 KDM5AP29375 1690 aaKnown RBP17.99■□□□□ 0.47
TPM4-212ENST00000590180 CPS1P31327 1500 aa17.99■□□□□ 0.47
TPM4-212ENST00000590180 TOM1O60784 492 aa17.99■□□□□ 0.47
TPM4-212ENST00000590180 SCAF1Q9H7N4 1312 aaKnown RBP17.98■□□□□ 0.47
TPM4-212ENST00000590180 KCNA6P17658 529 aa17.98■□□□□ 0.47
TPM4-212ENST00000590180 FOXD1Q16676 465 aa17.98■□□□□ 0.47
TPM4-212ENST00000590180 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
TPM4-212ENST00000590180 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
TPM4-212ENST00000590180 TMEM131LA2VDJ0 1609 aa17.96■□□□□ 0.47
TPM4-212ENST00000590180 ZFYVE9O95405 1425 aa17.96■□□□□ 0.47
TPM4-212ENST00000590180 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
TPM4-212ENST00000590180 PROSER2Q86WR7 435 aaPredicted RBP17.95■□□□□ 0.46
TPM4-212ENST00000590180 PLEKHG1Q9ULL1 1385 aa17.94■□□□□ 0.46
TPM4-212ENST00000590180 TBX22Q9Y458 520 aa17.94■□□□□ 0.46
TPM4-212ENST00000590180 ACIN1Q9UKV3 1341 aaKnown RBP17.94■□□□□ 0.46
TPM4-212ENST00000590180 MYO5BQ9ULV0 1848 aa17.93■□□□□ 0.46
TPM4-212ENST00000590180 RBM33Q96EV2 1170 aaKnown RBP17.91■□□□□ 0.46
TPM4-212ENST00000590180 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
TPM4-212ENST00000590180 SPHKAPQ2M3C7 1700 aa17.9■□□□□ 0.46
TPM4-212ENST00000590180 STRCP1A6NGW2 1772 aa17.89■□□□□ 0.45
TPM4-212ENST00000590180 RAB3GAP2Q9H2M9 1393 aa17.88■□□□□ 0.45
TPM4-212ENST00000590180 TMEM94Q12767 1356 aa17.87■□□□□ 0.45
TPM4-212ENST00000590180 TRPM2O94759 1503 aa17.87■□□□□ 0.45
TPM4-212ENST00000590180 VGFO15240 615 aaPredicted RBP17.86■□□□□ 0.45
TPM4-212ENST00000590180 RGL3Q3MIN7 710 aa17.86■□□□□ 0.45
TPM4-212ENST00000590180 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
TPM4-212ENST00000590180 ADAMTS13Q76LX8 1427 aa17.84■□□□□ 0.45
TPM4-212ENST00000590180 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
TPM4-212ENST00000590180 C14orf37Q86TY3 774 aa17.84■□□□□ 0.45
TPM4-212ENST00000590180 AMOTL2Q9Y2J4 779 aa17.84■□□□□ 0.45
TPM4-212ENST00000590180 HSPA1LP34931 641 aa17.83■□□□□ 0.44
TPM4-212ENST00000590180 CCDC144AA2RUR9 1427 aa17.82■□□□□ 0.44
TPM4-212ENST00000590180 KIF1BO60333 1816 aa17.81■□□□□ 0.44
TPM4-212ENST00000590180 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
TPM4-212ENST00000590180 HRCP23327 699 aa17.8■□□□□ 0.44
TPM4-212ENST00000590180 MSH6P52701 1360 aa17.78■□□□□ 0.44
TPM4-212ENST00000590180 NKTRP30414 1462 aaKnown RBP17.76■□□□□ 0.43
TPM4-212ENST00000590180 CHD2O14647 1828 aaKnown RBP17.76■□□□□ 0.43
TPM4-212ENST00000590180 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
TPM4-212ENST00000590180 METP08581 1390 aa17.76■□□□□ 0.43
TPM4-212ENST00000590180 SLAIN2Q9P270 581 aa17.75■□□□□ 0.43
TPM4-212ENST00000590180 DIP2AQ14689 1571 aa17.74■□□□□ 0.43
TPM4-212ENST00000590180 PTPRUQ92729 1446 aa17.74■□□□□ 0.43
TPM4-212ENST00000590180 C19orf44Q9H6X5 657 aa17.74■□□□□ 0.43
TPM4-212ENST00000590180 NWD1Q149M9 1564 aa17.74■□□□□ 0.43
TPM4-212ENST00000590180 ATF3P18847 181 aa17.73■□□□□ 0.43
TPM4-212ENST00000590180 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
TPM4-212ENST00000590180 ALKQ9UM73 1620 aa17.72■□□□□ 0.43
TPM4-212ENST00000590180 XIRP1Q702N8 1843 aaKnown RBP17.72■□□□□ 0.43
TPM4-212ENST00000590180 SETBP1Q9Y6X0 1596 aa17.72■□□□□ 0.43
TPM4-212ENST00000590180 DISP3Q9P2K9 1392 aa17.71■□□□□ 0.43
TPM4-212ENST00000590180 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
TPM4-212ENST00000590180 NCOA3Q9Y6Q9 1424 aa17.71■□□□□ 0.43
TPM4-212ENST00000590180 ANKRD30BQ9BXX2 1392 aa17.7■□□□□ 0.42
TPM4-212ENST00000590180 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
TPM4-212ENST00000590180 FAM135BQ49AJ0 1406 aa17.69■□□□□ 0.42
TPM4-212ENST00000590180 NRXN3Q9Y4C0 1643 aa17.69■□□□□ 0.42
TPM4-212ENST00000590180 STK26Q9P289 416 aa17.67■□□□□ 0.42
TPM4-212ENST00000590180 KDM2AQ9Y2K7 1162 aa17.66■□□□□ 0.42
TPM4-212ENST00000590180 TMEM132EQ6IEE7 984 aa17.65■□□□□ 0.42
TPM4-212ENST00000590180 PPLO60437 1756 aa17.63■□□□□ 0.41
TPM4-212ENST00000590180 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
TPM4-212ENST00000590180 CFAP70Q5T0N1 1121 aa17.61■□□□□ 0.41
TPM4-212ENST00000590180 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
TPM4-212ENST00000590180 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
TPM4-212ENST00000590180 XRN1Q8IZH2 1706 aaKnown RBP17.59■□□□□ 0.41
TPM4-212ENST00000590180 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
TPM4-212ENST00000590180 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.41
TPM4-212ENST00000590180 BRINP3Q76B58 766 aa17.57■□□□□ 0.4
TPM4-212ENST00000590180 ROBO1Q9Y6N7 1651 aa17.57■□□□□ 0.4
TPM4-212ENST00000590180 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
TPM4-212ENST00000590180 LRPPRCP42704 1394 aaKnown RBP17.56■□□□□ 0.4
TPM4-212ENST00000590180 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
TPM4-212ENST00000590180 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
TPM4-212ENST00000590180 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
TPM4-212ENST00000590180 ADGRL3Q9HAR2 1447 aa17.55■□□□□ 0.4
TPM4-212ENST00000590180 DHX57Q6P158 1386 aaKnown RBP17.55■□□□□ 0.4
TPM4-212ENST00000590180 DCCP43146 1447 aa17.55■□□□□ 0.4
TPM4-212ENST00000590180 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
TPM4-212ENST00000590180 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
TPM4-212ENST00000590180 SETD1AO15047 1707 aaKnown RBP17.53■□□□□ 0.4
TPM4-212ENST00000590180 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
TPM4-212ENST00000590180 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
TPM4-212ENST00000590180 SIRT1Q96EB6 747 aa17.52■□□□□ 0.4
TPM4-212ENST00000590180 MST1RQ04912 1400 aa17.52■□□□□ 0.4
TPM4-212ENST00000590180 YTHDC2Q9H6S0 1430 aaKnown RBP17.52■□□□□ 0.4
TPM4-212ENST00000590180 MYOM2P54296 1465 aa17.51■□□□□ 0.39
TPM4-212ENST00000590180 ORAI2Q96SN7 254 aa17.51■□□□□ 0.39
TPM4-212ENST00000590180 POGKQ9P215 609 aa17.51■□□□□ 0.39
TPM4-212ENST00000590180 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
TPM4-212ENST00000590180 NEUROD1Q13562 356 aa17.5■□□□□ 0.39
TPM4-212ENST00000590180 SAFB2Q14151 953 aaKnown RBP eCLIP17.5■□□□□ 0.39
TPM4-212ENST00000590180 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
TPM4-212ENST00000590180 TRAK1Q9UPV9 953 aa17.5■□□□□ 0.39
TPM4-212ENST00000590180 NRXN1Q9ULB1 1477 aa17.5■□□□□ 0.39
TPM4-212ENST00000590180 SIN3AQ96ST3 1273 aa17.49■□□□□ 0.39
TPM4-212ENST00000590180 JCADQ9P266 1359 aa17.49■□□□□ 0.39
TPM4-212ENST00000590180 PLEKHH1Q9ULM0 1364 aa17.49■□□□□ 0.39
TPM4-212ENST00000590180 PRAG1Q86YV5 1406 aa17.48■□□□□ 0.39
TPM4-212ENST00000590180 ESCO1Q5FWF5 840 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms