RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 ANKRD50Q9ULJ7 1429 aa22.11■■□□□ 1.13
SAFB2-205ENST00000590000 CHD2O14647 1828 aaKnown RBP22.1■■□□□ 1.13
SAFB2-205ENST00000590000 APLP2Q06481 763 aa22.1■■□□□ 1.13
SAFB2-205ENST00000590000 PROSER2Q86WR7 435 aaPredicted RBP22.1■■□□□ 1.13
SAFB2-205ENST00000590000 NKTRP30414 1462 aaKnown RBP22.09■■□□□ 1.13
SAFB2-205ENST00000590000 POTEAQ6S8J7 498 aa22.08■■□□□ 1.13
SAFB2-205ENST00000590000 UNC13BO14795 1591 aa22.08■■□□□ 1.12
SAFB2-205ENST00000590000 FAM50AQ14320 339 aaKnown RBP22.07■■□□□ 1.12
SAFB2-205ENST00000590000 RPRD2Q5VT52 1461 aaKnown RBP22.07■■□□□ 1.12
SAFB2-205ENST00000590000 E9PCH4 1651 aa22.07■■□□□ 1.12
SAFB2-205ENST00000590000 SLC52A1Q9NWF4 448 aa22.06■■□□□ 1.12
SAFB2-205ENST00000590000 RIMS2Q9UQ26 1411 aa22.06■■□□□ 1.12
SAFB2-205ENST00000590000 PLEKHG1Q9ULL1 1385 aa22.04■■□□□ 1.12
SAFB2-205ENST00000590000 ADAMTS13Q76LX8 1427 aa22.03■■□□□ 1.12
SAFB2-205ENST00000590000 NUTM2DQ5VT03 806 aaPredicted RBP22■■□□□ 1.11
SAFB2-205ENST00000590000 PHLPP1O60346 1717 aa22■■□□□ 1.11
SAFB2-205ENST00000590000 COL16A1Q07092 1604 aaPredicted RBP21.99■■□□□ 1.11
SAFB2-205ENST00000590000 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
SAFB2-205ENST00000590000 SLAIN2Q9P270 581 aa21.97■■□□□ 1.11
SAFB2-205ENST00000590000 IQGAP3Q86VI3 1631 aa21.97■■□□□ 1.11
SAFB2-205ENST00000590000 MSH6P52701 1360 aa21.97■■□□□ 1.11
SAFB2-205ENST00000590000 BCANQ96GW7 911 aa21.96■■□□□ 1.11
SAFB2-205ENST00000590000 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
SAFB2-205ENST00000590000 LRP6O75581 1613 aa21.95■■□□□ 1.1
SAFB2-205ENST00000590000 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.94■■□□□ 1.1
SAFB2-205ENST00000590000 TBX22Q9Y458 520 aa21.94■■□□□ 1.1
SAFB2-205ENST00000590000 NRXN3Q9Y4C0 1643 aa21.92■■□□□ 1.1
SAFB2-205ENST00000590000 CHGAP10645 457 aaKnown RBP21.91■■□□□ 1.1
SAFB2-205ENST00000590000 ROCK1Q13464 1354 aa21.9■■□□□ 1.1
SAFB2-205ENST00000590000 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
SAFB2-205ENST00000590000 JCADQ9P266 1359 aa21.88■■□□□ 1.09
SAFB2-205ENST00000590000 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
SAFB2-205ENST00000590000 AHDC1Q5TGY3 1603 aaPredicted RBP21.87■■□□□ 1.09
SAFB2-205ENST00000590000 NCOA3Q9Y6Q9 1424 aa21.86■■□□□ 1.09
SAFB2-205ENST00000590000 XRN1Q8IZH2 1706 aaKnown RBP21.86■■□□□ 1.09
SAFB2-205ENST00000590000 NUP155O75694 1391 aa21.85■■□□□ 1.09
SAFB2-205ENST00000590000 PPARGC1BQ86YN6 1023 aaKnown RBP21.83■■□□□ 1.09
SAFB2-205ENST00000590000 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.83■■□□□ 1.09
SAFB2-205ENST00000590000 PIK3R4Q99570 1358 aa21.83■■□□□ 1.08
SAFB2-205ENST00000590000 TRPM2O94759 1503 aa21.82■■□□□ 1.08
SAFB2-205ENST00000590000 AMOTL2Q9Y2J4 779 aa21.82■■□□□ 1.08
SAFB2-205ENST00000590000 SPHKAPQ2M3C7 1700 aa21.82■■□□□ 1.08
SAFB2-205ENST00000590000 SHPRHQ149N8 1683 aa21.82■■□□□ 1.08
SAFB2-205ENST00000590000 ITGAEP38570 1179 aa21.81■■□□□ 1.08
SAFB2-205ENST00000590000 SETBP1Q9Y6X0 1596 aa21.8■■□□□ 1.08
SAFB2-205ENST00000590000 HDGFP51858 240 aaKnown RBP21.8■■□□□ 1.08
SAFB2-205ENST00000590000 C19orf44Q9H6X5 657 aa21.8■■□□□ 1.08
SAFB2-205ENST00000590000 BRINP3Q76B58 766 aa21.79■■□□□ 1.08
SAFB2-205ENST00000590000 METP08581 1390 aa21.78■■□□□ 1.08
SAFB2-205ENST00000590000 CLTCL1P53675 1640 aa21.77■■□□□ 1.08
SAFB2-205ENST00000590000 C14orf37Q86TY3 774 aa21.77■■□□□ 1.08
SAFB2-205ENST00000590000 MST1RQ04912 1400 aa21.76■■□□□ 1.07
SAFB2-205ENST00000590000 CADPS2Q86UW7 1296 aa21.76■■□□□ 1.07
SAFB2-205ENST00000590000 NHSL1Q5SYE7 1610 aa21.75■■□□□ 1.07
SAFB2-205ENST00000590000 NEXMIFQ5QGS0 1516 aa21.75■■□□□ 1.07
SAFB2-205ENST00000590000 ASXL1Q8IXJ9 1541 aa21.75■■□□□ 1.07
SAFB2-205ENST00000590000 SPATA31A6Q5VVP1 1343 aa21.74■■□□□ 1.07
SAFB2-205ENST00000590000 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
SAFB2-205ENST00000590000 ATF3P18847 181 aa21.73■■□□□ 1.07
SAFB2-205ENST00000590000 DDX17Q92841 729 aaKnown RBP21.72■■□□□ 1.07
SAFB2-205ENST00000590000 DCCP43146 1447 aa21.71■■□□□ 1.07
SAFB2-205ENST00000590000 SETD5Q9C0A6 1442 aa21.68■■□□□ 1.06
SAFB2-205ENST00000590000 TRIM52Q96A61 297 aa21.67■■□□□ 1.06
SAFB2-205ENST00000590000 ADGRL3Q9HAR2 1447 aa21.66■■□□□ 1.06
SAFB2-205ENST00000590000 NUTM2BA6NNL0 878 aaPredicted RBP21.66■■□□□ 1.06
SAFB2-205ENST00000590000 NUTM2EB1AL46 878 aaPredicted RBP21.66■■□□□ 1.06
SAFB2-205ENST00000590000 NUTM2AQ8IVF1 878 aaPredicted RBP21.66■■□□□ 1.06
SAFB2-205ENST00000590000 UPF1Q92900 1129 aaKnown RBP eCLIP21.66■■□□□ 1.06
SAFB2-205ENST00000590000 NAIPQ13075 1403 aa21.65■■□□□ 1.06
SAFB2-205ENST00000590000 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.05
SAFB2-205ENST00000590000 MEX3CQ5U5Q3 659 aaKnown RBP21.63■■□□□ 1.05
SAFB2-205ENST00000590000 ZNF772Q68DY9 489 aaPredicted RBP21.62■■□□□ 1.05
SAFB2-205ENST00000590000 RRBP1Q9P2E9 1410 aaKnown RBP21.62■■□□□ 1.05
SAFB2-205ENST00000590000 KIF1BO60333 1816 aa21.62■■□□□ 1.05
SAFB2-205ENST00000590000 PNPLA6Q8IY17 1366 aa21.61■■□□□ 1.05
SAFB2-205ENST00000590000 AFF2P51816 1311 aa21.6■■□□□ 1.05
SAFB2-205ENST00000590000 ROBO2Q9HCK4 1378 aa21.6■■□□□ 1.05
SAFB2-205ENST00000590000 LAMC1P11047 1609 aa21.59■■□□□ 1.05
SAFB2-205ENST00000590000 C1orf167Q5SNV9 1468 aa21.58■■□□□ 1.05
SAFB2-205ENST00000590000 RXRBP28702 533 aa21.56■■□□□ 1.04
SAFB2-205ENST00000590000 CDK12Q9NYV4 1490 aaPredicted RBP21.56■■□□□ 1.04
SAFB2-205ENST00000590000 RGS12O14924 1447 aa21.55■■□□□ 1.04
SAFB2-205ENST00000590000 PTCH1Q13635 1447 aa21.55■■□□□ 1.04
SAFB2-205ENST00000590000 PPLO60437 1756 aa21.54■■□□□ 1.04
SAFB2-205ENST00000590000 ORAI2Q96SN7 254 aa21.54■■□□□ 1.04
SAFB2-205ENST00000590000 LRRC59Q96AG4 307 aaKnown RBP21.53■■□□□ 1.04
SAFB2-205ENST00000590000 PRAG1Q86YV5 1406 aa21.53■■□□□ 1.04
SAFB2-205ENST00000590000 C8orf37Q96NL8 207 aa21.51■■□□□ 1.03
SAFB2-205ENST00000590000 SOS2Q07890 1332 aaPredicted RBP21.5■■□□□ 1.03
SAFB2-205ENST00000590000 HFM1A2PYH4 1435 aa21.47■■□□□ 1.03
SAFB2-205ENST00000590000 ADAMTS2O95450 1211 aa21.47■■□□□ 1.03
SAFB2-205ENST00000590000 FOXD1Q16676 465 aa21.47■■□□□ 1.03
SAFB2-205ENST00000590000 QTRT2Q9H974 415 aaKnown RBP21.47■■□□□ 1.03
SAFB2-205ENST00000590000 COL22A1Q8NFW1 1626 aaPredicted RBP21.44■■□□□ 1.02
SAFB2-205ENST00000590000 VGFO15240 615 aaPredicted RBP21.43■■□□□ 1.02
SAFB2-205ENST00000590000 RBM6P78332 1123 aaKnown RBP21.43■■□□□ 1.02
SAFB2-205ENST00000590000 ADGRF5Q8IZF2 1346 aa21.43■■□□□ 1.02
SAFB2-205ENST00000590000 PXDNQ92626 1479 aa21.42■■□□□ 1.02
SAFB2-205ENST00000590000 IFT172Q9UG01 1749 aa21.42■■□□□ 1.02
SAFB2-205ENST00000590000 SLC4A1APQ9BWU0 796 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms