RNA–Protein interactions for RNA: ENST00000589964.1

CROCCP3-203, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 3 BASIC

Gene CROCCP3, Length 255 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-203ENST00000589964 NAIPQ13075 1403 aa25.74■■□□□ 1.71
CROCCP3-203ENST00000589964 RBM33Q96EV2 1170 aaKnown RBP25.74■■□□□ 1.71
CROCCP3-203ENST00000589964 RIMS2Q9UQ26 1411 aa25.73■■□□□ 1.71
CROCCP3-203ENST00000589964 NUTM2DQ5VT03 806 aaPredicted RBP25.73■■□□□ 1.71
CROCCP3-203ENST00000589964 DISP3Q9P2K9 1392 aa25.72■■□□□ 1.71
CROCCP3-203ENST00000589964 ILDR2Q71H61 639 aa25.72■■□□□ 1.71
CROCCP3-203ENST00000589964 CHGAP10645 457 aaKnown RBP25.69■■□□□ 1.7
CROCCP3-203ENST00000589964 TOM1O60784 492 aa25.67■■□□□ 1.7
CROCCP3-203ENST00000589964 TMEM94Q12767 1356 aa25.64■■□□□ 1.69
CROCCP3-203ENST00000589964 PLEKHG1Q9ULL1 1385 aa25.64■■□□□ 1.69
CROCCP3-203ENST00000589964 NWD1Q149M9 1564 aa25.64■■□□□ 1.69
CROCCP3-203ENST00000589964 SPHKAPQ2M3C7 1700 aa25.63■■□□□ 1.69
CROCCP3-203ENST00000589964 ADAMTS13Q76LX8 1427 aa25.62■■□□□ 1.69
CROCCP3-203ENST00000589964 KCNA6P17658 529 aa25.61■■□□□ 1.69
CROCCP3-203ENST00000589964 BCANQ96GW7 911 aa25.6■■□□□ 1.69
CROCCP3-203ENST00000589964 HFM1A2PYH4 1435 aa25.6■■□□□ 1.69
CROCCP3-203ENST00000589964 CLTCL1P53675 1640 aa25.59■■□□□ 1.69
CROCCP3-203ENST00000589964 PPP1R15AO75807 674 aaPredicted RBP25.58■■□□□ 1.69
CROCCP3-203ENST00000589964 PROSER2Q86WR7 435 aaPredicted RBP25.56■■□□□ 1.68
CROCCP3-203ENST00000589964 NKTRP30414 1462 aaKnown RBP25.54■■□□□ 1.68
CROCCP3-203ENST00000589964 CHD2O14647 1828 aaKnown RBP25.54■■□□□ 1.68
CROCCP3-203ENST00000589964 NRXN3Q9Y4C0 1643 aa25.54■■□□□ 1.68
CROCCP3-203ENST00000589964 MED1Q15648 1581 aaPredicted RBP25.53■■□□□ 1.68
CROCCP3-203ENST00000589964 PTPRUQ92729 1446 aa25.53■■□□□ 1.68
CROCCP3-203ENST00000589964 TRPM2O94759 1503 aa25.52■■□□□ 1.68
CROCCP3-203ENST00000589964 FOXD1Q16676 465 aa25.49■■□□□ 1.67
CROCCP3-203ENST00000589964 TRIM52Q96A61 297 aa25.49■■□□□ 1.67
CROCCP3-203ENST00000589964 TBX22Q9Y458 520 aa25.49■■□□□ 1.67
CROCCP3-203ENST00000589964 NEXMIFQ5QGS0 1516 aa25.47■■□□□ 1.67
CROCCP3-203ENST00000589964 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.47■■□□□ 1.67
CROCCP3-203ENST00000589964 DIP2AQ14689 1571 aa25.44■■□□□ 1.66
CROCCP3-203ENST00000589964 ROBO1Q9Y6N7 1651 aa25.43■■□□□ 1.66
CROCCP3-203ENST00000589964 SETBP1Q9Y6X0 1596 aa25.43■■□□□ 1.66
CROCCP3-203ENST00000589964 ZNF326Q5BKZ1 582 aaKnown RBP25.42■■□□□ 1.66
CROCCP3-203ENST00000589964 METP08581 1390 aa25.42■■□□□ 1.66
CROCCP3-203ENST00000589964 FAM135BQ49AJ0 1406 aa25.41■■□□□ 1.66
CROCCP3-203ENST00000589964 HDGFP51858 240 aaKnown RBP25.41■■□□□ 1.66
CROCCP3-203ENST00000589964 SLC4A1APQ9BWU0 796 aaKnown RBP25.41■■□□□ 1.66
CROCCP3-203ENST00000589964 XRN1Q8IZH2 1706 aaKnown RBP25.39■■□□□ 1.65
CROCCP3-203ENST00000589964 MSH6P52701 1360 aa25.38■■□□□ 1.65
CROCCP3-203ENST00000589964 AMOTL2Q9Y2J4 779 aa25.37■■□□□ 1.65
CROCCP3-203ENST00000589964 KIF1BO60333 1816 aa25.35■■□□□ 1.65
CROCCP3-203ENST00000589964 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.34■■□□□ 1.65
CROCCP3-203ENST00000589964 PIK3R4Q99570 1358 aa25.34■■□□□ 1.65
CROCCP3-203ENST00000589964 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
CROCCP3-203ENST00000589964 SETD1AO15047 1707 aaKnown RBP25.32■■□□□ 1.64
CROCCP3-203ENST00000589964 SOCS7O14512 581 aa25.28■■□□□ 1.64
CROCCP3-203ENST00000589964 C14orf37Q86TY3 774 aa25.28■■□□□ 1.64
CROCCP3-203ENST00000589964 MPHOSPH9Q99550 1183 aa25.28■■□□□ 1.64
CROCCP3-203ENST00000589964 PPLO60437 1756 aa25.26■■□□□ 1.63
CROCCP3-203ENST00000589964 RGS17Q9UGC6 210 aaPredicted RBP25.26■■□□□ 1.63
CROCCP3-203ENST00000589964 NCOA3Q9Y6Q9 1424 aa25.26■■□□□ 1.63
CROCCP3-203ENST00000589964 PHLPP1O60346 1717 aa25.24■■□□□ 1.63
CROCCP3-203ENST00000589964 COL16A1Q07092 1604 aaPredicted RBP25.24■■□□□ 1.63
CROCCP3-203ENST00000589964 SPATA31E1Q6ZUB1 1445 aa25.24■■□□□ 1.63
CROCCP3-203ENST00000589964 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
CROCCP3-203ENST00000589964 SETD5Q9C0A6 1442 aa25.22■■□□□ 1.63
CROCCP3-203ENST00000589964 NALCNQ8IZF0 1738 aa25.22■■□□□ 1.63
CROCCP3-203ENST00000589964 ROBO2Q9HCK4 1378 aa25.21■■□□□ 1.63
CROCCP3-203ENST00000589964 ADGRF5Q8IZF2 1346 aa25.21■■□□□ 1.63
CROCCP3-203ENST00000589964 RAB3GAP2Q9H2M9 1393 aa25.2■■□□□ 1.63
CROCCP3-203ENST00000589964 RGL3Q3MIN7 710 aa25.19■■□□□ 1.62
CROCCP3-203ENST00000589964 CCDC144AA2RUR9 1427 aa25.19■■□□□ 1.62
CROCCP3-203ENST00000589964 MST1RQ04912 1400 aa25.19■■□□□ 1.62
CROCCP3-203ENST00000589964 PHF23Q9BUL5 403 aaPredicted RBP25.18■■□□□ 1.62
CROCCP3-203ENST00000589964 ATF3P18847 181 aa25.17■■□□□ 1.62
CROCCP3-203ENST00000589964 BRINP3Q76B58 766 aa25.17■■□□□ 1.62
CROCCP3-203ENST00000589964 CADPS2Q86UW7 1296 aa25.17■■□□□ 1.62
CROCCP3-203ENST00000589964 ADGRL3Q9HAR2 1447 aa25.17■■□□□ 1.62
CROCCP3-203ENST00000589964 ASXL1Q8IXJ9 1541 aa25.17■■□□□ 1.62
CROCCP3-203ENST00000589964 IFT172Q9UG01 1749 aa25.16■■□□□ 1.62
CROCCP3-203ENST00000589964 VGFO15240 615 aaPredicted RBP25.15■■□□□ 1.62
CROCCP3-203ENST00000589964 DDX17Q92841 729 aaKnown RBP25.15■■□□□ 1.62
CROCCP3-203ENST00000589964 AHDC1Q5TGY3 1603 aaPredicted RBP25.15■■□□□ 1.62
CROCCP3-203ENST00000589964 RPGRIP1LQ68CZ1 1315 aa25.14■■□□□ 1.62
CROCCP3-203ENST00000589964 LRP6O75581 1613 aa25.14■■□□□ 1.61
CROCCP3-203ENST00000589964 DCCP43146 1447 aa25.13■■□□□ 1.61
CROCCP3-203ENST00000589964 PTCH1Q13635 1447 aa25.12■■□□□ 1.61
CROCCP3-203ENST00000589964 JCADQ9P266 1359 aa25.09■■□□□ 1.61
CROCCP3-203ENST00000589964 POTEAQ6S8J7 498 aa25.09■■□□□ 1.61
CROCCP3-203ENST00000589964 PRAG1Q86YV5 1406 aa25.09■■□□□ 1.61
CROCCP3-203ENST00000589964 TMEM132EQ6IEE7 984 aa25.06■■□□□ 1.6
CROCCP3-203ENST00000589964 PIK3C2GO75747 1445 aa25.05■■□□□ 1.6
CROCCP3-203ENST00000589964 PLEKHH1Q9ULM0 1364 aa25.05■■□□□ 1.6
CROCCP3-203ENST00000589964 NHSL1Q5SYE7 1610 aa25.04■■□□□ 1.6
CROCCP3-203ENST00000589964 C1orf167Q5SNV9 1468 aa25.04■■□□□ 1.6
CROCCP3-203ENST00000589964 STK26Q9P289 416 aa25.04■■□□□ 1.6
CROCCP3-203ENST00000589964 ANKRD30BQ9BXX2 1392 aa25.02■■□□□ 1.6
CROCCP3-203ENST00000589964 SHPRHQ149N8 1683 aa25.01■■□□□ 1.59
CROCCP3-203ENST00000589964 WAPLQ7Z5K2 1190 aa25.01■■□□□ 1.59
CROCCP3-203ENST00000589964 ORAI2Q96SN7 254 aa25.01■■□□□ 1.59
CROCCP3-203ENST00000589964 NRXN1Q9ULB1 1477 aa24.99■■□□□ 1.59
CROCCP3-203ENST00000589964 LRPPRCP42704 1394 aaKnown RBP24.98■■□□□ 1.59
CROCCP3-203ENST00000589964 TECPR2O15040 1411 aa24.97■■□□□ 1.59
CROCCP3-203ENST00000589964 CFAP70Q5T0N1 1121 aa24.96■■□□□ 1.59
CROCCP3-203ENST00000589964 NUTM2BA6NNL0 878 aaPredicted RBP24.94■■□□□ 1.58
CROCCP3-203ENST00000589964 NUTM2EB1AL46 878 aaPredicted RBP24.94■■□□□ 1.58
CROCCP3-203ENST00000589964 NUTM2AQ8IVF1 878 aaPredicted RBP24.94■■□□□ 1.58
CROCCP3-203ENST00000589964 MYOM2P54296 1465 aa24.94■■□□□ 1.58
CROCCP3-203ENST00000589964 YTHDC2Q9H6S0 1430 aaKnown RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms