RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-221ENST00000589867 FOXD1Q16676 465 aa25.91■■□□□ 1.74
MBD1-221ENST00000589867 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
MBD1-221ENST00000589867 MPHOSPH9Q99550 1183 aa25.89■■□□□ 1.74
MBD1-221ENST00000589867 CPS1P31327 1500 aa25.88■■□□□ 1.73
MBD1-221ENST00000589867 PLEKHG1Q9ULL1 1385 aa25.86■■□□□ 1.73
MBD1-221ENST00000589867 NUTM2DQ5VT03 806 aaPredicted RBP25.85■■□□□ 1.73
MBD1-221ENST00000589867 SLC26A8Q96RN1 970 aa25.84■■□□□ 1.73
MBD1-221ENST00000589867 KIF1BO60333 1816 aa25.82■■□□□ 1.72
MBD1-221ENST00000589867 SENP3Q9H4L4 574 aaPredicted RBP25.82■■□□□ 1.72
MBD1-221ENST00000589867 ADAMTS13Q76LX8 1427 aa25.81■■□□□ 1.72
MBD1-221ENST00000589867 LRRC7Q96NW7 1537 aa25.81■■□□□ 1.72
MBD1-221ENST00000589867 NEXMIFQ5QGS0 1516 aa25.8■■□□□ 1.72
MBD1-221ENST00000589867 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.8■■□□□ 1.72
MBD1-221ENST00000589867 NRXN3Q9Y4C0 1643 aa25.77■■□□□ 1.72
MBD1-221ENST00000589867 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
MBD1-221ENST00000589867 HDGFP51858 240 aaKnown RBP25.77■■□□□ 1.72
MBD1-221ENST00000589867 ACIN1Q9UKV3 1341 aaKnown RBP25.77■■□□□ 1.72
MBD1-221ENST00000589867 PPP1R15AO75807 674 aaPredicted RBP25.76■■□□□ 1.71
MBD1-221ENST00000589867 HRCP23327 699 aa25.76■■□□□ 1.71
MBD1-221ENST00000589867 ALKQ9UM73 1620 aa25.75■■□□□ 1.71
MBD1-221ENST00000589867 NWD1Q149M9 1564 aa25.75■■□□□ 1.71
MBD1-221ENST00000589867 KCNA6P17658 529 aa25.74■■□□□ 1.71
MBD1-221ENST00000589867 CHD2O14647 1828 aaKnown RBP25.74■■□□□ 1.71
MBD1-221ENST00000589867 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
MBD1-221ENST00000589867 TBX22Q9Y458 520 aa25.73■■□□□ 1.71
MBD1-221ENST00000589867 SPATA31E1Q6ZUB1 1445 aa25.72■■□□□ 1.71
MBD1-221ENST00000589867 SETBP1Q9Y6X0 1596 aa25.72■■□□□ 1.71
MBD1-221ENST00000589867 BCANQ96GW7 911 aa25.7■■□□□ 1.7
MBD1-221ENST00000589867 CCDC144AA2RUR9 1427 aa25.7■■□□□ 1.7
MBD1-221ENST00000589867 DIP2AQ14689 1571 aa25.69■■□□□ 1.7
MBD1-221ENST00000589867 UBAP1LF5GYI3 381 aa25.68■■□□□ 1.7
MBD1-221ENST00000589867 PPLO60437 1756 aa25.68■■□□□ 1.7
MBD1-221ENST00000589867 PTPRUQ92729 1446 aa25.67■■□□□ 1.7
MBD1-221ENST00000589867 ANKRD30BQ9BXX2 1392 aa25.66■■□□□ 1.7
MBD1-221ENST00000589867 NKTRP30414 1462 aaKnown RBP25.65■■□□□ 1.7
MBD1-221ENST00000589867 TMEM94Q12767 1356 aa25.64■■□□□ 1.69
MBD1-221ENST00000589867 RPGRIP1LQ68CZ1 1315 aa25.63■■□□□ 1.69
MBD1-221ENST00000589867 RBM33Q96EV2 1170 aaKnown RBP25.63■■□□□ 1.69
MBD1-221ENST00000589867 PIK3R4Q99570 1358 aa25.63■■□□□ 1.69
MBD1-221ENST00000589867 SETD1AO15047 1707 aaKnown RBP25.63■■□□□ 1.69
MBD1-221ENST00000589867 IFT172Q9UG01 1749 aa25.63■■□□□ 1.69
MBD1-221ENST00000589867 METP08581 1390 aa25.62■■□□□ 1.69
MBD1-221ENST00000589867 PROSER2Q86WR7 435 aaPredicted RBP25.59■■□□□ 1.69
MBD1-221ENST00000589867 XRN1Q8IZH2 1706 aaKnown RBP25.59■■□□□ 1.69
MBD1-221ENST00000589867 RGL3Q3MIN7 710 aa25.58■■□□□ 1.69
MBD1-221ENST00000589867 VGFO15240 615 aaPredicted RBP25.57■■□□□ 1.68
MBD1-221ENST00000589867 ADGRF5Q8IZF2 1346 aa25.57■■□□□ 1.68
MBD1-221ENST00000589867 TOM1O60784 492 aa25.55■■□□□ 1.68
MBD1-221ENST00000589867 AMOTL2Q9Y2J4 779 aa25.55■■□□□ 1.68
MBD1-221ENST00000589867 PIP4K2BP78356 416 aa25.52■■□□□ 1.68
MBD1-221ENST00000589867 NCOA3Q9Y6Q9 1424 aa25.48■■□□□ 1.67
MBD1-221ENST00000589867 NRXN1Q9ULB1 1477 aa25.47■■□□□ 1.67
MBD1-221ENST00000589867 PIK3C2GO75747 1445 aa25.47■■□□□ 1.67
MBD1-221ENST00000589867 ASXL1Q8IXJ9 1541 aa25.46■■□□□ 1.67
MBD1-221ENST00000589867 PRAG1Q86YV5 1406 aa25.45■■□□□ 1.66
MBD1-221ENST00000589867 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
MBD1-221ENST00000589867 MYOM2P54296 1465 aa25.44■■□□□ 1.66
MBD1-221ENST00000589867 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.43■■□□□ 1.66
MBD1-221ENST00000589867 HSPA1LP34931 641 aa25.43■■□□□ 1.66
MBD1-221ENST00000589867 TRIM26Q12899 539 aaPredicted RBP25.42■■□□□ 1.66
MBD1-221ENST00000589867 MSH6P52701 1360 aa25.42■■□□□ 1.66
MBD1-221ENST00000589867 DHX57Q6P158 1386 aaKnown RBP25.42■■□□□ 1.66
MBD1-221ENST00000589867 ROBO2Q9HCK4 1378 aa25.41■■□□□ 1.66
MBD1-221ENST00000589867 PTCH1Q13635 1447 aa25.39■■□□□ 1.66
MBD1-221ENST00000589867 FAM135BQ49AJ0 1406 aa25.38■■□□□ 1.65
MBD1-221ENST00000589867 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
MBD1-221ENST00000589867 C14orf93Q9H972 538 aaKnown RBP25.37■■□□□ 1.65
MBD1-221ENST00000589867 NALCNQ8IZF0 1738 aa25.36■■□□□ 1.65
MBD1-221ENST00000589867 ROBO1Q9Y6N7 1651 aa25.36■■□□□ 1.65
MBD1-221ENST00000589867 TMEM132EQ6IEE7 984 aa25.35■■□□□ 1.65
MBD1-221ENST00000589867 CFAP70Q5T0N1 1121 aa25.34■■□□□ 1.65
MBD1-221ENST00000589867 SLAIN2Q9P270 581 aa25.34■■□□□ 1.65
MBD1-221ENST00000589867 TECPR2O15040 1411 aa25.33■■□□□ 1.65
MBD1-221ENST00000589867 ADGRL3Q9HAR2 1447 aa25.33■■□□□ 1.65
MBD1-221ENST00000589867 LRPPRCP42704 1394 aaKnown RBP25.32■■□□□ 1.64
MBD1-221ENST00000589867 C14orf37Q86TY3 774 aa25.32■■□□□ 1.64
MBD1-221ENST00000589867 DCCP43146 1447 aa25.31■■□□□ 1.64
MBD1-221ENST00000589867 DCAF11Q8TEB1 546 aa25.31■■□□□ 1.64
MBD1-221ENST00000589867 KNDC1Q76NI1 1749 aa25.31■■□□□ 1.64
MBD1-221ENST00000589867 ABCC11Q96J66 1382 aa25.31■■□□□ 1.64
MBD1-221ENST00000589867 LAMC1P11047 1609 aa25.3■■□□□ 1.64
MBD1-221ENST00000589867 CADPS2Q86UW7 1296 aa25.29■■□□□ 1.64
MBD1-221ENST00000589867 KDM2AQ9Y2K7 1162 aa25.29■■□□□ 1.64
MBD1-221ENST00000589867 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
MBD1-221ENST00000589867 ADGRB1O14514 1584 aa25.28■■□□□ 1.64
MBD1-221ENST00000589867 STK26Q9P289 416 aa25.27■■□□□ 1.64
MBD1-221ENST00000589867 MST1RQ04912 1400 aa25.27■■□□□ 1.64
MBD1-221ENST00000589867 ATF3P18847 181 aa25.26■■□□□ 1.63
MBD1-221ENST00000589867 SIN3AQ96ST3 1273 aa25.26■■□□□ 1.63
MBD1-221ENST00000589867 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
MBD1-221ENST00000589867 WAPLQ7Z5K2 1190 aa25.25■■□□□ 1.63
MBD1-221ENST00000589867 STAC3Q96MF2 364 aa25.23■■□□□ 1.63
MBD1-221ENST00000589867 BRINP3Q76B58 766 aa25.2■■□□□ 1.62
MBD1-221ENST00000589867 SIRT1Q96EB6 747 aa25.19■■□□□ 1.62
MBD1-221ENST00000589867 COL16A1Q07092 1604 aaPredicted RBP25.17■■□□□ 1.62
MBD1-221ENST00000589867 AHDC1Q5TGY3 1603 aaPredicted RBP25.17■■□□□ 1.62
MBD1-221ENST00000589867 PHLPP1O60346 1717 aa25.17■■□□□ 1.62
MBD1-221ENST00000589867 DLC1Q96QB1 1528 aa25.17■■□□□ 1.62
MBD1-221ENST00000589867 C1orf167Q5SNV9 1468 aa25.16■■□□□ 1.62
MBD1-221ENST00000589867 CDC42BPGQ6DT37 1551 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms