RNA–Protein interactions for RNA: ENST00000589648.1

CHAF1A-207, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-207ENST00000589648 MSH6P52701 1360 aa23.24■■□□□ 1.31
CHAF1A-207ENST00000589648 SLC52A1Q9NWF4 448 aa23.23■■□□□ 1.31
CHAF1A-207ENST00000589648 APLP2Q06481 763 aa23.21■■□□□ 1.31
CHAF1A-207ENST00000589648 ZFYVE9O95405 1425 aa23.18■■□□□ 1.3
CHAF1A-207ENST00000589648 JCADQ9P266 1359 aa23.18■■□□□ 1.3
CHAF1A-207ENST00000589648 PLEKHG1Q9ULL1 1385 aa23.17■■□□□ 1.3
CHAF1A-207ENST00000589648 PHLPP1O60346 1717 aa23.16■■□□□ 1.3
CHAF1A-207ENST00000589648 RPRD2Q5VT52 1461 aaKnown RBP23.15■■□□□ 1.3
CHAF1A-207ENST00000589648 ADGRL2O95490 1459 aa23.14■■□□□ 1.29
CHAF1A-207ENST00000589648 PPP1R15AO75807 674 aaPredicted RBP23.14■■□□□ 1.29
CHAF1A-207ENST00000589648 RIMS2Q9UQ26 1411 aa23.14■■□□□ 1.29
CHAF1A-207ENST00000589648 SETD1AO15047 1707 aaKnown RBP23.11■■□□□ 1.29
CHAF1A-207ENST00000589648 HDGFP51858 240 aaKnown RBP23.11■■□□□ 1.29
CHAF1A-207ENST00000589648 CHD2O14647 1828 aaKnown RBP23.1■■□□□ 1.29
CHAF1A-207ENST00000589648 ANKRD50Q9ULJ7 1429 aa23.1■■□□□ 1.29
CHAF1A-207ENST00000589648 TBX22Q9Y458 520 aa23.1■■□□□ 1.29
CHAF1A-207ENST00000589648 COL16A1Q07092 1604 aaPredicted RBP23.1■■□□□ 1.29
CHAF1A-207ENST00000589648 NCOA3Q9Y6Q9 1424 aa23.08■■□□□ 1.29
CHAF1A-207ENST00000589648 TMEM131LA2VDJ0 1609 aa23.08■■□□□ 1.29
CHAF1A-207ENST00000589648 LRP6O75581 1613 aa23.08■■□□□ 1.28
CHAF1A-207ENST00000589648 FAM50AQ14320 339 aaKnown RBP23.07■■□□□ 1.28
CHAF1A-207ENST00000589648 C14orf37Q86TY3 774 aa23.07■■□□□ 1.28
CHAF1A-207ENST00000589648 SPATA31A6Q5VVP1 1343 aa23.07■■□□□ 1.28
CHAF1A-207ENST00000589648 GCC2Q8IWJ2 1684 aa23.06■■□□□ 1.28
CHAF1A-207ENST00000589648 MYO5BQ9ULV0 1848 aa23.06■■□□□ 1.28
CHAF1A-207ENST00000589648 CHGAP10645 457 aaKnown RBP23.05■■□□□ 1.28
CHAF1A-207ENST00000589648 NUTM2DQ5VT03 806 aaPredicted RBP23.05■■□□□ 1.28
CHAF1A-207ENST00000589648 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHAF1A-207ENST00000589648 ADAMTS13Q76LX8 1427 aa23.05■■□□□ 1.28
CHAF1A-207ENST00000589648 MEX3CQ5U5Q3 659 aaKnown RBP23.04■■□□□ 1.28
CHAF1A-207ENST00000589648 CADPS2Q86UW7 1296 aa23.03■■□□□ 1.28
CHAF1A-207ENST00000589648 C19orf44Q9H6X5 657 aa23.03■■□□□ 1.28
CHAF1A-207ENST00000589648 ZNF772Q68DY9 489 aaPredicted RBP23.02■■□□□ 1.28
CHAF1A-207ENST00000589648 ATF3P18847 181 aa23.01■■□□□ 1.27
CHAF1A-207ENST00000589648 AHDC1Q5TGY3 1603 aaPredicted RBP23■■□□□ 1.27
CHAF1A-207ENST00000589648 PIK3R4Q99570 1358 aa23■■□□□ 1.27
CHAF1A-207ENST00000589648 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.99■■□□□ 1.27
CHAF1A-207ENST00000589648 UPF1Q92900 1129 aaKnown RBP eCLIP22.99■■□□□ 1.27
CHAF1A-207ENST00000589648 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
CHAF1A-207ENST00000589648 DIP2AQ14689 1571 aa22.98■■□□□ 1.27
CHAF1A-207ENST00000589648 UNC13BO14795 1591 aa22.97■■□□□ 1.27
CHAF1A-207ENST00000589648 BRINP3Q76B58 766 aa22.96■■□□□ 1.27
CHAF1A-207ENST00000589648 AMOTL2Q9Y2J4 779 aa22.96■■□□□ 1.27
CHAF1A-207ENST00000589648 SHPRHQ149N8 1683 aa22.96■■□□□ 1.27
CHAF1A-207ENST00000589648 PTPRUQ92729 1446 aa22.95■■□□□ 1.26
CHAF1A-207ENST00000589648 E9PCH4 1651 aa22.94■■□□□ 1.26
CHAF1A-207ENST00000589648 RXRBP28702 533 aa22.93■■□□□ 1.26
CHAF1A-207ENST00000589648 TRPM2O94759 1503 aa22.92■■□□□ 1.26
CHAF1A-207ENST00000589648 NUTM2BA6NNL0 878 aaPredicted RBP22.92■■□□□ 1.26
CHAF1A-207ENST00000589648 NUTM2EB1AL46 878 aaPredicted RBP22.92■■□□□ 1.26
CHAF1A-207ENST00000589648 NUTM2AQ8IVF1 878 aaPredicted RBP22.92■■□□□ 1.26
CHAF1A-207ENST00000589648 DCCP43146 1447 aa22.88■■□□□ 1.25
CHAF1A-207ENST00000589648 ASXL1Q8IXJ9 1541 aa22.87■■□□□ 1.25
CHAF1A-207ENST00000589648 IQGAP3Q86VI3 1631 aa22.87■■□□□ 1.25
CHAF1A-207ENST00000589648 ROCK1Q13464 1354 aa22.87■■□□□ 1.25
CHAF1A-207ENST00000589648 NUP155O75694 1391 aa22.86■■□□□ 1.25
CHAF1A-207ENST00000589648 CDK12Q9NYV4 1490 aaPredicted RBP22.85■■□□□ 1.25
CHAF1A-207ENST00000589648 AFF2P51816 1311 aa22.85■■□□□ 1.25
CHAF1A-207ENST00000589648 SETD5Q9C0A6 1442 aa22.85■■□□□ 1.25
CHAF1A-207ENST00000589648 MST1RQ04912 1400 aa22.84■■□□□ 1.25
CHAF1A-207ENST00000589648 NRXN3Q9Y4C0 1643 aa22.82■■□□□ 1.24
CHAF1A-207ENST00000589648 XRN1Q8IZH2 1706 aaKnown RBP22.82■■□□□ 1.24
CHAF1A-207ENST00000589648 SETBP1Q9Y6X0 1596 aa22.81■■□□□ 1.24
CHAF1A-207ENST00000589648 METP08581 1390 aa22.81■■□□□ 1.24
CHAF1A-207ENST00000589648 LRRC59Q96AG4 307 aaKnown RBP22.81■■□□□ 1.24
CHAF1A-207ENST00000589648 DDX17Q92841 729 aaKnown RBP22.8■■□□□ 1.24
CHAF1A-207ENST00000589648 NHSL1Q5SYE7 1610 aa22.79■■□□□ 1.24
CHAF1A-207ENST00000589648 C8orf37Q96NL8 207 aa22.78■■□□□ 1.24
CHAF1A-207ENST00000589648 ZNF326Q5BKZ1 582 aaKnown RBP22.77■■□□□ 1.24
CHAF1A-207ENST00000589648 PNPLA6Q8IY17 1366 aa22.76■■□□□ 1.23
CHAF1A-207ENST00000589648 QTRT2Q9H974 415 aaKnown RBP22.76■■□□□ 1.23
CHAF1A-207ENST00000589648 RGS12O14924 1447 aa22.75■■□□□ 1.23
CHAF1A-207ENST00000589648 ADGRL3Q9HAR2 1447 aa22.75■■□□□ 1.23
CHAF1A-207ENST00000589648 ITGAEP38570 1179 aa22.75■■□□□ 1.23
CHAF1A-207ENST00000589648 RBM6P78332 1123 aaKnown RBP22.74■■□□□ 1.23
CHAF1A-207ENST00000589648 SPHKAPQ2M3C7 1700 aa22.7■■□□□ 1.22
CHAF1A-207ENST00000589648 ADAMTS2O95450 1211 aa22.69■■□□□ 1.22
CHAF1A-207ENST00000589648 NGLY1Q96IV0 654 aa22.69■■□□□ 1.22
CHAF1A-207ENST00000589648 NALCNQ8IZF0 1738 aa22.68■■□□□ 1.22
CHAF1A-207ENST00000589648 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
CHAF1A-207ENST00000589648 NEXMIFQ5QGS0 1516 aa22.67■■□□□ 1.22
CHAF1A-207ENST00000589648 SRCAPQ6ZRS2 3230 aa22.65■■□□□ 1.22
CHAF1A-207ENST00000589648 CLTCL1P53675 1640 aa22.64■■□□□ 1.22
CHAF1A-207ENST00000589648 ORAI2Q96SN7 254 aa22.64■■□□□ 1.21
CHAF1A-207ENST00000589648 SOS2Q07890 1332 aaPredicted RBP22.62■■□□□ 1.21
CHAF1A-207ENST00000589648 ROBO2Q9HCK4 1378 aa22.62■■□□□ 1.21
CHAF1A-207ENST00000589648 LAMC1P11047 1609 aa22.61■■□□□ 1.21
CHAF1A-207ENST00000589648 PTCH1Q13635 1447 aa22.61■■□□□ 1.21
CHAF1A-207ENST00000589648 USP21Q9UK80 565 aa22.61■■□□□ 1.21
CHAF1A-207ENST00000589648 ATAD2Q6PL18 1390 aa22.6■■□□□ 1.21
CHAF1A-207ENST00000589648 FNBP4Q8N3X1 1017 aaPredicted RBP22.58■■□□□ 1.21
CHAF1A-207ENST00000589648 TRPC5Q9UL62 973 aaPredicted RBP22.58■■□□□ 1.21
CHAF1A-207ENST00000589648 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
CHAF1A-207ENST00000589648 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
CHAF1A-207ENST00000589648 ATRNO75882 1429 aa22.54■■□□□ 1.2
CHAF1A-207ENST00000589648 PRAG1Q86YV5 1406 aa22.54■■□□□ 1.2
CHAF1A-207ENST00000589648 KIF1BO60333 1816 aa22.52■■□□□ 1.2
CHAF1A-207ENST00000589648 HFM1A2PYH4 1435 aa22.51■■□□□ 1.19
CHAF1A-207ENST00000589648 COL22A1Q8NFW1 1626 aaPredicted RBP22.5■■□□□ 1.19
CHAF1A-207ENST00000589648 MYOM2P54296 1465 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms