RNA–Protein interactions for RNA: ENST00000589627.1

VASP-208, Transcript of vasodilator stimulated phosphoprotein, humanhuman

TSL 3

Gene VASP, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VASP-208ENST00000589627 SCAF1Q9H7N4 1312 aaKnown RBP36.13■■■■□ 3.37
VASP-208ENST00000589627 RIMS2Q9UQ26 1411 aa36.13■■■■□ 3.37
VASP-208ENST00000589627 HSPA1LP34931 641 aa36.11■■■■□ 3.37
VASP-208ENST00000589627 PLEKHG1Q9ULL1 1385 aa36.11■■■■□ 3.37
VASP-208ENST00000589627 CHD2O14647 1828 aaKnown RBP36.11■■■■□ 3.37
VASP-208ENST00000589627 NKTRP30414 1462 aaKnown RBP36.08■■■■□ 3.37
VASP-208ENST00000589627 SLC26A8Q96RN1 970 aa36.08■■■■□ 3.37
VASP-208ENST00000589627 NAIPQ13075 1403 aa36.08■■■■□ 3.37
VASP-208ENST00000589627 KCNA6P17658 529 aa36.07■■■■□ 3.36
VASP-208ENST00000589627 HDGFP51858 240 aaKnown RBP36.01■■■■□ 3.36
VASP-208ENST00000589627 DIP2AQ14689 1571 aa36.01■■■■□ 3.35
VASP-208ENST00000589627 TMEM94Q12767 1356 aa36.01■■■■□ 3.35
VASP-208ENST00000589627 ILDR2Q71H61 639 aa35.98■■■■□ 3.35
VASP-208ENST00000589627 MED1Q15648 1581 aaPredicted RBP35.98■■■■□ 3.35
VASP-208ENST00000589627 CHGAP10645 457 aaKnown RBP35.97■■■■□ 3.35
VASP-208ENST00000589627 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.97■■■■□ 3.35
VASP-208ENST00000589627 HFM1A2PYH4 1435 aa35.97■■■■□ 3.35
VASP-208ENST00000589627 PPP1R15AO75807 674 aaPredicted RBP35.96■■■■□ 3.35
VASP-208ENST00000589627 ADAMTS13Q76LX8 1427 aa35.96■■■■□ 3.35
VASP-208ENST00000589627 TRPM2O94759 1503 aa35.94■■■■□ 3.34
VASP-208ENST00000589627 CLTCL1P53675 1640 aa35.94■■■■□ 3.34
VASP-208ENST00000589627 BCANQ96GW7 911 aa35.93■■■■□ 3.34
VASP-208ENST00000589627 TBX22Q9Y458 520 aa35.91■■■■□ 3.34
VASP-208ENST00000589627 PROSER2Q86WR7 435 aaPredicted RBP35.9■■■■□ 3.34
VASP-208ENST00000589627 NRXN3Q9Y4C0 1643 aa35.9■■■■□ 3.34
VASP-208ENST00000589627 KIF1BO60333 1816 aa35.89■■■■□ 3.34
VASP-208ENST00000589627 SENP3Q9H4L4 574 aaPredicted RBP35.87■■■■□ 3.33
VASP-208ENST00000589627 FAM135BQ49AJ0 1406 aa35.86■■■■□ 3.33
VASP-208ENST00000589627 ROBO1Q9Y6N7 1651 aa35.85■■■■□ 3.33
VASP-208ENST00000589627 NUTM2DQ5VT03 806 aaPredicted RBP35.85■■■■□ 3.33
VASP-208ENST00000589627 PIK3R4Q99570 1358 aa35.85■■■■□ 3.33
VASP-208ENST00000589627 SETBP1Q9Y6X0 1596 aa35.85■■■■□ 3.33
VASP-208ENST00000589627 RBM33Q96EV2 1170 aaKnown RBP35.82■■■■□ 3.32
VASP-208ENST00000589627 NEXMIFQ5QGS0 1516 aa35.81■■■■□ 3.32
VASP-208ENST00000589627 NCOA3Q9Y6Q9 1424 aa35.79■■■■□ 3.32
VASP-208ENST00000589627 MSH6P52701 1360 aa35.78■■■■□ 3.32
VASP-208ENST00000589627 XRN1Q8IZH2 1706 aaKnown RBP35.77■■■■□ 3.32
VASP-208ENST00000589627 PTPRUQ92729 1446 aa35.74■■■■□ 3.31
VASP-208ENST00000589627 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.73■■■■□ 3.31
VASP-208ENST00000589627 SOCS7O14512 581 aa35.7■■■■□ 3.31
VASP-208ENST00000589627 TRIM52Q96A61 297 aa35.69■■■■□ 3.3
VASP-208ENST00000589627 ZNF326Q5BKZ1 582 aaKnown RBP35.68■■■■□ 3.3
VASP-208ENST00000589627 SETD1AO15047 1707 aaKnown RBP35.66■■■■□ 3.3
VASP-208ENST00000589627 PPLO60437 1756 aa35.64■■■■□ 3.3
VASP-208ENST00000589627 PHLPP1O60346 1717 aa35.64■■■■□ 3.3
VASP-208ENST00000589627 SLC4A1APQ9BWU0 796 aaKnown RBP35.64■■■■□ 3.3
VASP-208ENST00000589627 AMOTL2Q9Y2J4 779 aa35.63■■■■□ 3.29
VASP-208ENST00000589627 SLAIN2Q9P270 581 aa35.62■■■■□ 3.29
VASP-208ENST00000589627 METP08581 1390 aa35.59■■■■□ 3.29
VASP-208ENST00000589627 COL16A1Q07092 1604 aaPredicted RBP35.55■■■■□ 3.28
VASP-208ENST00000589627 C19orf44Q9H6X5 657 aa35.55■■■■□ 3.28
VASP-208ENST00000589627 DCCP43146 1447 aa35.54■■■■□ 3.28
VASP-208ENST00000589627 C14orf37Q86TY3 774 aa35.52■■■■□ 3.28
VASP-208ENST00000589627 CADPS2Q86UW7 1296 aa35.52■■■■□ 3.28
VASP-208ENST00000589627 AHDC1Q5TGY3 1603 aaPredicted RBP35.51■■■■□ 3.28
VASP-208ENST00000589627 PHF23Q9BUL5 403 aaPredicted RBP35.51■■■■□ 3.28
VASP-208ENST00000589627 NALCNQ8IZF0 1738 aa35.51■■■■□ 3.27
VASP-208ENST00000589627 IFT172Q9UG01 1749 aa35.5■■■■□ 3.27
VASP-208ENST00000589627 RPGRIP1LQ68CZ1 1315 aa35.5■■■■□ 3.27
VASP-208ENST00000589627 VGFO15240 615 aaPredicted RBP35.46■■■■□ 3.27
VASP-208ENST00000589627 ATF3P18847 181 aa35.46■■■■□ 3.27
VASP-208ENST00000589627 FOXD1Q16676 465 aa35.46■■■■□ 3.27
VASP-208ENST00000589627 PRAG1Q86YV5 1406 aa35.44■■■■□ 3.26
VASP-208ENST00000589627 CCDC144AA2RUR9 1427 aa35.43■■■■□ 3.26
VASP-208ENST00000589627 ADGRL3Q9HAR2 1447 aa35.43■■■■□ 3.26
VASP-208ENST00000589627 PTCH1Q13635 1447 aa35.42■■■■□ 3.26
VASP-208ENST00000589627 MPHOSPH9Q99550 1183 aa35.42■■■■□ 3.26
VASP-208ENST00000589627 SPATA31E1Q6ZUB1 1445 aa35.41■■■■□ 3.26
VASP-208ENST00000589627 JCADQ9P266 1359 aa35.4■■■■□ 3.26
VASP-208ENST00000589627 MST1RQ04912 1400 aa35.4■■■■□ 3.26
VASP-208ENST00000589627 SETD5Q9C0A6 1442 aa35.4■■■■□ 3.26
VASP-208ENST00000589627 SHPRHQ149N8 1683 aa35.39■■■■□ 3.26
VASP-208ENST00000589627 NHSL1Q5SYE7 1610 aa35.39■■■■□ 3.26
VASP-208ENST00000589627 ACIN1Q9UKV3 1341 aaKnown RBP35.38■■■■□ 3.25
VASP-208ENST00000589627 RGS17Q9UGC6 210 aaPredicted RBP35.38■■■■□ 3.25
VASP-208ENST00000589627 ASXL1Q8IXJ9 1541 aa35.37■■■■□ 3.25
VASP-208ENST00000589627 BRINP3Q76B58 766 aa35.33■■■■□ 3.25
VASP-208ENST00000589627 ROBO2Q9HCK4 1378 aa35.31■■■■□ 3.24
VASP-208ENST00000589627 ANKRD30BQ9BXX2 1392 aa35.26■■■■□ 3.24
VASP-208ENST00000589627 RAB3GAP2Q9H2M9 1393 aa35.26■■■■□ 3.24
VASP-208ENST00000589627 ADGRF5Q8IZF2 1346 aa35.26■■■■□ 3.23
VASP-208ENST00000589627 KNDC1Q76NI1 1749 aa35.26■■■■□ 3.23
VASP-208ENST00000589627 LRP6O75581 1613 aa35.24■■■■□ 3.23
VASP-208ENST00000589627 LAMC1P11047 1609 aa35.24■■■■□ 3.23
VASP-208ENST00000589627 SPATA31A6Q5VVP1 1343 aa35.22■■■■□ 3.23
VASP-208ENST00000589627 PIK3C2GO75747 1445 aa35.22■■■■□ 3.23
VASP-208ENST00000589627 RGL3Q3MIN7 710 aa35.21■■■■□ 3.23
VASP-208ENST00000589627 C1orf167Q5SNV9 1468 aa35.2■■■■□ 3.23
VASP-208ENST00000589627 TECPR2O15040 1411 aa35.19■■■■□ 3.22
VASP-208ENST00000589627 CDC42BPGQ6DT37 1551 aa35.17■■■■□ 3.22
VASP-208ENST00000589627 POTEAQ6S8J7 498 aa35.15■■■■□ 3.22
VASP-208ENST00000589627 NRXN1Q9ULB1 1477 aa35.15■■■■□ 3.22
VASP-208ENST00000589627 MYOM2P54296 1465 aa35.14■■■■□ 3.22
VASP-208ENST00000589627 LRPPRCP42704 1394 aaKnown RBP35.12■■■■□ 3.21
VASP-208ENST00000589627 ABCC11Q96J66 1382 aa35.07■■■■□ 3.2
VASP-208ENST00000589627 DDX17Q92841 729 aaKnown RBP35.04■■■■□ 3.2
VASP-208ENST00000589627 LRRC59Q96AG4 307 aaKnown RBP35.04■■■■□ 3.2
VASP-208ENST00000589627 YTHDC2Q9H6S0 1430 aaKnown RBP35.04■■■■□ 3.2
VASP-208ENST00000589627 PNPLA6Q8IY17 1366 aa35.01■■■■□ 3.2
VASP-208ENST00000589627 FMN2Q9NZ56 1722 aa35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms