RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 CPS1P31327 1500 aa25.12■■□□□ 1.61
H3F3B-208ENST00000589599 SPHKAPQ2M3C7 1700 aa25.11■■□□□ 1.61
H3F3B-208ENST00000589599 ZFYVE9O95405 1425 aa25.11■■□□□ 1.61
H3F3B-208ENST00000589599 ZNF326Q5BKZ1 582 aaKnown RBP25.1■■□□□ 1.61
H3F3B-208ENST00000589599 SLC26A8Q96RN1 970 aa25.1■■□□□ 1.61
H3F3B-208ENST00000589599 PLEKHG1Q9ULL1 1385 aa25.08■■□□□ 1.61
H3F3B-208ENST00000589599 TRPM2O94759 1503 aa25.08■■□□□ 1.61
H3F3B-208ENST00000589599 NUTM2DQ5VT03 806 aaPredicted RBP25.07■■□□□ 1.6
H3F3B-208ENST00000589599 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
H3F3B-208ENST00000589599 FOXD1Q16676 465 aa25.06■■□□□ 1.6
H3F3B-208ENST00000589599 SENP3Q9H4L4 574 aaPredicted RBP25.06■■□□□ 1.6
H3F3B-208ENST00000589599 UBAP1LF5GYI3 381 aa25.05■■□□□ 1.6
H3F3B-208ENST00000589599 MYO5BQ9ULV0 1848 aa25.03■■□□□ 1.6
H3F3B-208ENST00000589599 KCNA6P17658 529 aa25.03■■□□□ 1.6
H3F3B-208ENST00000589599 HRCP23327 699 aa25.02■■□□□ 1.6
H3F3B-208ENST00000589599 TBX22Q9Y458 520 aa25.02■■□□□ 1.6
H3F3B-208ENST00000589599 CLTCL1P53675 1640 aa25.01■■□□□ 1.59
H3F3B-208ENST00000589599 TOM1O60784 492 aa24.98■■□□□ 1.59
H3F3B-208ENST00000589599 LRRC7Q96NW7 1537 aa24.96■■□□□ 1.59
H3F3B-208ENST00000589599 CCDC144AA2RUR9 1427 aa24.96■■□□□ 1.59
H3F3B-208ENST00000589599 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
H3F3B-208ENST00000589599 VGFO15240 615 aaPredicted RBP24.94■■□□□ 1.58
H3F3B-208ENST00000589599 PROSER2Q86WR7 435 aaPredicted RBP24.94■■□□□ 1.58
H3F3B-208ENST00000589599 STRCP1A6NGW2 1772 aa24.93■■□□□ 1.58
H3F3B-208ENST00000589599 KIF1BO60333 1816 aa24.92■■□□□ 1.58
H3F3B-208ENST00000589599 ADAMTS13Q76LX8 1427 aa24.91■■□□□ 1.58
H3F3B-208ENST00000589599 PIK3R4Q99570 1358 aa24.9■■□□□ 1.58
H3F3B-208ENST00000589599 SCAF1Q9H7N4 1312 aaKnown RBP24.88■■□□□ 1.57
H3F3B-208ENST00000589599 PIP4K2BP78356 416 aa24.88■■□□□ 1.57
H3F3B-208ENST00000589599 RGL3Q3MIN7 710 aa24.88■■□□□ 1.57
H3F3B-208ENST00000589599 DIP2AQ14689 1571 aa24.88■■□□□ 1.57
H3F3B-208ENST00000589599 NEXMIFQ5QGS0 1516 aa24.87■■□□□ 1.57
H3F3B-208ENST00000589599 TMEM94Q12767 1356 aa24.87■■□□□ 1.57
H3F3B-208ENST00000589599 NKTRP30414 1462 aaKnown RBP24.86■■□□□ 1.57
H3F3B-208ENST00000589599 AMOTL2Q9Y2J4 779 aa24.84■■□□□ 1.57
H3F3B-208ENST00000589599 RBM33Q96EV2 1170 aaKnown RBP24.83■■□□□ 1.57
H3F3B-208ENST00000589599 NWD1Q149M9 1564 aa24.83■■□□□ 1.57
H3F3B-208ENST00000589599 SETBP1Q9Y6X0 1596 aa24.83■■□□□ 1.57
H3F3B-208ENST00000589599 SPATA31E1Q6ZUB1 1445 aa24.81■■□□□ 1.56
H3F3B-208ENST00000589599 C14orf37Q86TY3 774 aa24.79■■□□□ 1.56
H3F3B-208ENST00000589599 CHD2O14647 1828 aaKnown RBP24.79■■□□□ 1.56
H3F3B-208ENST00000589599 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
H3F3B-208ENST00000589599 METP08581 1390 aa24.78■■□□□ 1.56
H3F3B-208ENST00000589599 MSH6P52701 1360 aa24.77■■□□□ 1.56
H3F3B-208ENST00000589599 NCOA3Q9Y6Q9 1424 aa24.76■■□□□ 1.55
H3F3B-208ENST00000589599 NRXN3Q9Y4C0 1643 aa24.75■■□□□ 1.55
H3F3B-208ENST00000589599 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
H3F3B-208ENST00000589599 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
H3F3B-208ENST00000589599 XIRP1Q702N8 1843 aaKnown RBP24.71■■□□□ 1.55
H3F3B-208ENST00000589599 HSPA1LP34931 641 aa24.71■■□□□ 1.55
H3F3B-208ENST00000589599 C19orf44Q9H6X5 657 aa24.71■■□□□ 1.55
H3F3B-208ENST00000589599 PPLO60437 1756 aa24.71■■□□□ 1.55
H3F3B-208ENST00000589599 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
H3F3B-208ENST00000589599 ALKQ9UM73 1620 aa24.7■■□□□ 1.54
H3F3B-208ENST00000589599 ATF3P18847 181 aa24.68■■□□□ 1.54
H3F3B-208ENST00000589599 SLAIN2Q9P270 581 aa24.68■■□□□ 1.54
H3F3B-208ENST00000589599 CADPS2Q86UW7 1296 aa24.66■■□□□ 1.54
H3F3B-208ENST00000589599 FAM135BQ49AJ0 1406 aa24.64■■□□□ 1.54
H3F3B-208ENST00000589599 XRN1Q8IZH2 1706 aaKnown RBP24.64■■□□□ 1.53
H3F3B-208ENST00000589599 STAC3Q96MF2 364 aa24.63■■□□□ 1.53
H3F3B-208ENST00000589599 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
H3F3B-208ENST00000589599 DCAF11Q8TEB1 546 aa24.61■■□□□ 1.53
H3F3B-208ENST00000589599 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
H3F3B-208ENST00000589599 STK26Q9P289 416 aa24.6■■□□□ 1.53
H3F3B-208ENST00000589599 KDM2AQ9Y2K7 1162 aa24.6■■□□□ 1.53
H3F3B-208ENST00000589599 IFT172Q9UG01 1749 aa24.6■■□□□ 1.53
H3F3B-208ENST00000589599 MYOM2P54296 1465 aa24.59■■□□□ 1.53
H3F3B-208ENST00000589599 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
H3F3B-208ENST00000589599 TMEM132EQ6IEE7 984 aa24.58■■□□□ 1.53
H3F3B-208ENST00000589599 PTCH1Q13635 1447 aa24.58■■□□□ 1.53
H3F3B-208ENST00000589599 SETD1AO15047 1707 aaKnown RBP24.56■■□□□ 1.52
H3F3B-208ENST00000589599 CFAP70Q5T0N1 1121 aa24.56■■□□□ 1.52
H3F3B-208ENST00000589599 NRXN1Q9ULB1 1477 aa24.56■■□□□ 1.52
H3F3B-208ENST00000589599 LRPPRCP42704 1394 aaKnown RBP24.55■■□□□ 1.52
H3F3B-208ENST00000589599 DCCP43146 1447 aa24.55■■□□□ 1.52
H3F3B-208ENST00000589599 PRAG1Q86YV5 1406 aa24.55■■□□□ 1.52
H3F3B-208ENST00000589599 ADGRL3Q9HAR2 1447 aa24.53■■□□□ 1.52
H3F3B-208ENST00000589599 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.53■■□□□ 1.52
H3F3B-208ENST00000589599 DHX57Q6P158 1386 aaKnown RBP24.53■■□□□ 1.52
H3F3B-208ENST00000589599 ABCC11Q96J66 1382 aa24.53■■□□□ 1.52
H3F3B-208ENST00000589599 YTHDC2Q9H6S0 1430 aaKnown RBP24.5■■□□□ 1.51
H3F3B-208ENST00000589599 ROBO1Q9Y6N7 1651 aa24.5■■□□□ 1.51
H3F3B-208ENST00000589599 SIRT1Q96EB6 747 aa24.49■■□□□ 1.51
H3F3B-208ENST00000589599 TECPR2O15040 1411 aa24.48■■□□□ 1.51
H3F3B-208ENST00000589599 WAPLQ7Z5K2 1190 aa24.48■■□□□ 1.51
H3F3B-208ENST00000589599 DISP3Q9P2K9 1392 aa24.47■■□□□ 1.51
H3F3B-208ENST00000589599 LAMC1P11047 1609 aa24.46■■□□□ 1.51
H3F3B-208ENST00000589599 BRINP3Q76B58 766 aa24.45■■□□□ 1.5
H3F3B-208ENST00000589599 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.5
H3F3B-208ENST00000589599 MST1RQ04912 1400 aa24.44■■□□□ 1.5
H3F3B-208ENST00000589599 NEUROD1Q13562 356 aa24.43■■□□□ 1.5
H3F3B-208ENST00000589599 SIN3AQ96ST3 1273 aa24.43■■□□□ 1.5
H3F3B-208ENST00000589599 POGKQ9P215 609 aa24.41■■□□□ 1.5
H3F3B-208ENST00000589599 NALCNQ8IZF0 1738 aa24.41■■□□□ 1.5
H3F3B-208ENST00000589599 PRAM1Q96QH2 718 aa24.39■■□□□ 1.49
H3F3B-208ENST00000589599 PLEKHH1Q9ULM0 1364 aa24.39■■□□□ 1.49
H3F3B-208ENST00000589599 TRAK1Q9UPV9 953 aa24.38■■□□□ 1.49
H3F3B-208ENST00000589599 C1orf167Q5SNV9 1468 aa24.38■■□□□ 1.49
H3F3B-208ENST00000589599 L3MBTL2Q969R5 705 aa24.37■■□□□ 1.49
H3F3B-208ENST00000589599 KNDC1Q76NI1 1749 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms