RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 ZFYVE9O95405 1425 aa24.39■■□□□ 1.5
DNMT1-221ENST00000589538 HRCP23327 699 aa24.38■■□□□ 1.49
DNMT1-221ENST00000589538 MPHOSPH9Q99550 1183 aa24.38■■□□□ 1.49
DNMT1-221ENST00000589538 CPS1P31327 1500 aa24.38■■□□□ 1.49
DNMT1-221ENST00000589538 CLTCL1P53675 1640 aa24.37■■□□□ 1.49
DNMT1-221ENST00000589538 KIF1BO60333 1816 aa24.36■■□□□ 1.49
DNMT1-221ENST00000589538 PPP1R15AO75807 674 aaPredicted RBP24.36■■□□□ 1.49
DNMT1-221ENST00000589538 PLEKHG1Q9ULL1 1385 aa24.34■■□□□ 1.49
DNMT1-221ENST00000589538 ILDR1Q86SU0 546 aaPredicted RBP24.34■■□□□ 1.49
DNMT1-221ENST00000589538 BCANQ96GW7 911 aa24.31■■□□□ 1.48
DNMT1-221ENST00000589538 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
DNMT1-221ENST00000589538 CCDC144AA2RUR9 1427 aa24.27■■□□□ 1.48
DNMT1-221ENST00000589538 FOXD1Q16676 465 aa24.27■■□□□ 1.48
DNMT1-221ENST00000589538 SLC26A8Q96RN1 970 aa24.26■■□□□ 1.47
DNMT1-221ENST00000589538 DIP2AQ14689 1571 aa24.25■■□□□ 1.47
DNMT1-221ENST00000589538 STRCP1A6NGW2 1772 aa24.24■■□□□ 1.47
DNMT1-221ENST00000589538 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
DNMT1-221ENST00000589538 RPGRIP1LQ68CZ1 1315 aa24.23■■□□□ 1.47
DNMT1-221ENST00000589538 NEXMIFQ5QGS0 1516 aa24.22■■□□□ 1.47
DNMT1-221ENST00000589538 NUTM2DQ5VT03 806 aaPredicted RBP24.22■■□□□ 1.47
DNMT1-221ENST00000589538 KCNA6P17658 529 aa24.21■■□□□ 1.47
DNMT1-221ENST00000589538 VGFO15240 615 aaPredicted RBP24.19■■□□□ 1.46
DNMT1-221ENST00000589538 LRRC7Q96NW7 1537 aa24.19■■□□□ 1.46
DNMT1-221ENST00000589538 PIK3R4Q99570 1358 aa24.18■■□□□ 1.46
DNMT1-221ENST00000589538 NWD1Q149M9 1564 aa24.18■■□□□ 1.46
DNMT1-221ENST00000589538 SETBP1Q9Y6X0 1596 aa24.18■■□□□ 1.46
DNMT1-221ENST00000589538 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
DNMT1-221ENST00000589538 NKTRP30414 1462 aaKnown RBP24.17■■□□□ 1.46
DNMT1-221ENST00000589538 CHD2O14647 1828 aaKnown RBP24.16■■□□□ 1.46
DNMT1-221ENST00000589538 PPLO60437 1756 aa24.14■■□□□ 1.46
DNMT1-221ENST00000589538 UBAP1LF5GYI3 381 aa24.14■■□□□ 1.45
DNMT1-221ENST00000589538 SPATA31E1Q6ZUB1 1445 aa24.14■■□□□ 1.45
DNMT1-221ENST00000589538 SENP3Q9H4L4 574 aaPredicted RBP24.14■■□□□ 1.45
DNMT1-221ENST00000589538 TOM1O60784 492 aa24.13■■□□□ 1.45
DNMT1-221ENST00000589538 NRXN3Q9Y4C0 1643 aa24.12■■□□□ 1.45
DNMT1-221ENST00000589538 ANKRD30BQ9BXX2 1392 aa24.12■■□□□ 1.45
DNMT1-221ENST00000589538 PROSER2Q86WR7 435 aaPredicted RBP24.1■■□□□ 1.45
DNMT1-221ENST00000589538 TRIM26Q12899 539 aaPredicted RBP24.09■■□□□ 1.45
DNMT1-221ENST00000589538 RGL3Q3MIN7 710 aa24.09■■□□□ 1.45
DNMT1-221ENST00000589538 IFT172Q9UG01 1749 aa24.07■■□□□ 1.44
DNMT1-221ENST00000589538 XIRP1Q702N8 1843 aaKnown RBP24.07■■□□□ 1.44
DNMT1-221ENST00000589538 TMEM94Q12767 1356 aa24.06■■□□□ 1.44
DNMT1-221ENST00000589538 NCOA3Q9Y6Q9 1424 aa24.04■■□□□ 1.44
DNMT1-221ENST00000589538 AMOTL2Q9Y2J4 779 aa24.03■■□□□ 1.44
DNMT1-221ENST00000589538 ALKQ9UM73 1620 aa24.02■■□□□ 1.44
DNMT1-221ENST00000589538 METP08581 1390 aa24.01■■□□□ 1.43
DNMT1-221ENST00000589538 XRN1Q8IZH2 1706 aaKnown RBP24.01■■□□□ 1.43
DNMT1-221ENST00000589538 MSH6P52701 1360 aa24■■□□□ 1.43
DNMT1-221ENST00000589538 PTPRUQ92729 1446 aa24■■□□□ 1.43
DNMT1-221ENST00000589538 SETD1AO15047 1707 aaKnown RBP23.99■■□□□ 1.43
DNMT1-221ENST00000589538 ADGRF5Q8IZF2 1346 aa23.98■■□□□ 1.43
DNMT1-221ENST00000589538 MYOM2P54296 1465 aa23.98■■□□□ 1.43
DNMT1-221ENST00000589538 STAC3Q96MF2 364 aa23.97■■□□□ 1.43
DNMT1-221ENST00000589538 SCAF1Q9H7N4 1312 aaKnown RBP23.97■■□□□ 1.43
DNMT1-221ENST00000589538 PIP4K2BP78356 416 aa23.96■■□□□ 1.43
DNMT1-221ENST00000589538 PIK3C2GO75747 1445 aa23.95■■□□□ 1.42
DNMT1-221ENST00000589538 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
DNMT1-221ENST00000589538 RBM33Q96EV2 1170 aaKnown RBP23.94■■□□□ 1.42
DNMT1-221ENST00000589538 NRXN1Q9ULB1 1477 aa23.92■■□□□ 1.42
DNMT1-221ENST00000589538 PRAG1Q86YV5 1406 aa23.92■■□□□ 1.42
DNMT1-221ENST00000589538 LAMC1P11047 1609 aa23.92■■□□□ 1.42
DNMT1-221ENST00000589538 C19orf44Q9H6X5 657 aa23.91■■□□□ 1.42
DNMT1-221ENST00000589538 PTCH1Q13635 1447 aa23.91■■□□□ 1.42
DNMT1-221ENST00000589538 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
DNMT1-221ENST00000589538 DCCP43146 1447 aa23.87■■□□□ 1.41
DNMT1-221ENST00000589538 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
DNMT1-221ENST00000589538 C14orf93Q9H972 538 aaKnown RBP23.87■■□□□ 1.41
DNMT1-221ENST00000589538 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.87■■□□□ 1.41
DNMT1-221ENST00000589538 FAM135BQ49AJ0 1406 aa23.86■■□□□ 1.41
DNMT1-221ENST00000589538 ATF3P18847 181 aa23.86■■□□□ 1.41
DNMT1-221ENST00000589538 LRPPRCP42704 1394 aaKnown RBP23.84■■□□□ 1.41
DNMT1-221ENST00000589538 SLAIN2Q9P270 581 aa23.84■■□□□ 1.41
DNMT1-221ENST00000589538 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.41
DNMT1-221ENST00000589538 TECPR2O15040 1411 aa23.83■■□□□ 1.4
DNMT1-221ENST00000589538 ADGRL3Q9HAR2 1447 aa23.83■■□□□ 1.4
DNMT1-221ENST00000589538 DHX57Q6P158 1386 aaKnown RBP23.82■■□□□ 1.4
DNMT1-221ENST00000589538 ABCC11Q96J66 1382 aa23.82■■□□□ 1.4
DNMT1-221ENST00000589538 KNDC1Q76NI1 1749 aa23.81■■□□□ 1.4
DNMT1-221ENST00000589538 ROBO2Q9HCK4 1378 aa23.81■■□□□ 1.4
DNMT1-221ENST00000589538 HSPA1LP34931 641 aa23.81■■□□□ 1.4
DNMT1-221ENST00000589538 ASXL1Q8IXJ9 1541 aa23.8■■□□□ 1.4
DNMT1-221ENST00000589538 CFAP70Q5T0N1 1121 aa23.8■■□□□ 1.4
DNMT1-221ENST00000589538 ROBO1Q9Y6N7 1651 aa23.79■■□□□ 1.4
DNMT1-221ENST00000589538 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
DNMT1-221ENST00000589538 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
DNMT1-221ENST00000589538 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
DNMT1-221ENST00000589538 STK26Q9P289 416 aa23.78■■□□□ 1.4
DNMT1-221ENST00000589538 SIRT1Q96EB6 747 aa23.77■■□□□ 1.4
DNMT1-221ENST00000589538 ADGRB1O14514 1584 aa23.71■■□□□ 1.39
DNMT1-221ENST00000589538 MST1RQ04912 1400 aa23.71■■□□□ 1.39
DNMT1-221ENST00000589538 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.39
DNMT1-221ENST00000589538 DLC1Q96QB1 1528 aa23.7■■□□□ 1.38
DNMT1-221ENST00000589538 NEUROD1Q13562 356 aa23.7■■□□□ 1.38
DNMT1-221ENST00000589538 SIN3AQ96ST3 1273 aa23.7■■□□□ 1.38
DNMT1-221ENST00000589538 CDC42BPGQ6DT37 1551 aa23.69■■□□□ 1.38
DNMT1-221ENST00000589538 WAPLQ7Z5K2 1190 aa23.68■■□□□ 1.38
DNMT1-221ENST00000589538 L3MBTL2Q969R5 705 aa23.67■■□□□ 1.38
DNMT1-221ENST00000589538 PHLPP1O60346 1717 aa23.66■■□□□ 1.38
DNMT1-221ENST00000589538 BRINP3Q76B58 766 aa23.65■■□□□ 1.38
DNMT1-221ENST00000589538 AHDC1Q5TGY3 1603 aaPredicted RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms