RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 SOCS7O14512 581 aa36.53■■■■□ 3.44
LSM7-205ENST00000589532 PLEKHG1Q9ULL1 1385 aa36.52■■■■□ 3.44
LSM7-205ENST00000589532 RIMS2Q9UQ26 1411 aa36.51■■■■□ 3.44
LSM7-205ENST00000589532 TMEM94Q12767 1356 aa36.51■■■■□ 3.43
LSM7-205ENST00000589532 KCNA6P17658 529 aa36.5■■■■□ 3.43
LSM7-205ENST00000589532 SLC26A8Q96RN1 970 aa36.5■■■■□ 3.43
LSM7-205ENST00000589532 CHD2O14647 1828 aaKnown RBP36.46■■■■□ 3.43
LSM7-205ENST00000589532 RRBP1Q9P2E9 1410 aaKnown RBP36.46■■■■□ 3.43
LSM7-205ENST00000589532 PPARGC1BQ86YN6 1023 aaKnown RBP36.45■■■■□ 3.43
LSM7-205ENST00000589532 NUP155O75694 1391 aa36.44■■■■□ 3.42
LSM7-205ENST00000589532 SPHKAPQ2M3C7 1700 aa36.4■■■■□ 3.42
LSM7-205ENST00000589532 ITGAEP38570 1179 aa36.4■■■■□ 3.42
LSM7-205ENST00000589532 FAM135BQ49AJ0 1406 aa36.39■■■■□ 3.42
LSM7-205ENST00000589532 DIP2AQ14689 1571 aa36.39■■■■□ 3.42
LSM7-205ENST00000589532 ADAMTS13Q76LX8 1427 aa36.38■■■■□ 3.41
LSM7-205ENST00000589532 ROBO1Q9Y6N7 1651 aa36.35■■■■□ 3.41
LSM7-205ENST00000589532 PROSER2Q86WR7 435 aaPredicted RBP36.32■■■■□ 3.4
LSM7-205ENST00000589532 PPP1R15AO75807 674 aaPredicted RBP36.3■■■■□ 3.4
LSM7-205ENST00000589532 RBM33Q96EV2 1170 aaKnown RBP36.3■■■■□ 3.4
LSM7-205ENST00000589532 NAIPQ13075 1403 aa36.29■■■■□ 3.4
LSM7-205ENST00000589532 HDGFP51858 240 aaKnown RBP36.29■■■■□ 3.4
LSM7-205ENST00000589532 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.29■■■■□ 3.4
LSM7-205ENST00000589532 NRXN3Q9Y4C0 1643 aa36.29■■■■□ 3.4
LSM7-205ENST00000589532 SENP3Q9H4L4 574 aaPredicted RBP36.28■■■■□ 3.4
LSM7-205ENST00000589532 TBX22Q9Y458 520 aa36.28■■■■□ 3.4
LSM7-205ENST00000589532 CHGAP10645 457 aaKnown RBP36.26■■■■□ 3.4
LSM7-205ENST00000589532 BCANQ96GW7 911 aa36.26■■■■□ 3.4
LSM7-205ENST00000589532 MSH6P52701 1360 aa36.24■■■■□ 3.39
LSM7-205ENST00000589532 PIK3R4Q99570 1358 aa36.24■■■■□ 3.39
LSM7-205ENST00000589532 TRPM2O94759 1503 aa36.24■■■■□ 3.39
LSM7-205ENST00000589532 CLTCL1P53675 1640 aa36.23■■■■□ 3.39
LSM7-205ENST00000589532 SETBP1Q9Y6X0 1596 aa36.23■■■■□ 3.39
LSM7-205ENST00000589532 NCOA3Q9Y6Q9 1424 aa36.22■■■■□ 3.39
LSM7-205ENST00000589532 NUTM2DQ5VT03 806 aaPredicted RBP36.2■■■■□ 3.39
LSM7-205ENST00000589532 XRN1Q8IZH2 1706 aaKnown RBP36.18■■■■□ 3.38
LSM7-205ENST00000589532 HFM1A2PYH4 1435 aa36.17■■■■□ 3.38
LSM7-205ENST00000589532 PTPRUQ92729 1446 aa36.17■■■■□ 3.38
LSM7-205ENST00000589532 NEXMIFQ5QGS0 1516 aa36.14■■■■□ 3.38
LSM7-205ENST00000589532 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.13■■■■□ 3.37
LSM7-205ENST00000589532 PHF23Q9BUL5 403 aaPredicted RBP36.11■■■■□ 3.37
LSM7-205ENST00000589532 PHLPP1O60346 1717 aa36.1■■■■□ 3.37
LSM7-205ENST00000589532 COL16A1Q07092 1604 aaPredicted RBP36.08■■■■□ 3.37
LSM7-205ENST00000589532 SLAIN2Q9P270 581 aa36.07■■■■□ 3.36
LSM7-205ENST00000589532 KIF1BO60333 1816 aa36.06■■■■□ 3.36
LSM7-205ENST00000589532 RGS17Q9UGC6 210 aaPredicted RBP36.03■■■■□ 3.36
LSM7-205ENST00000589532 AHDC1Q5TGY3 1603 aaPredicted RBP36.01■■■■□ 3.35
LSM7-205ENST00000589532 AMOTL2Q9Y2J4 779 aa36■■■■□ 3.35
LSM7-205ENST00000589532 SETD1AO15047 1707 aaKnown RBP35.99■■■■□ 3.35
LSM7-205ENST00000589532 DCCP43146 1447 aa35.99■■■■□ 3.35
LSM7-205ENST00000589532 METP08581 1390 aa35.98■■■■□ 3.35
LSM7-205ENST00000589532 C19orf44Q9H6X5 657 aa35.96■■■■□ 3.35
LSM7-205ENST00000589532 ZNF326Q5BKZ1 582 aaKnown RBP35.95■■■■□ 3.35
LSM7-205ENST00000589532 CADPS2Q86UW7 1296 aa35.93■■■■□ 3.34
LSM7-205ENST00000589532 JCADQ9P266 1359 aa35.92■■■■□ 3.34
LSM7-205ENST00000589532 C14orf37Q86TY3 774 aa35.91■■■■□ 3.34
LSM7-205ENST00000589532 NALCNQ8IZF0 1738 aa35.9■■■■□ 3.34
LSM7-205ENST00000589532 PPLO60437 1756 aa35.88■■■■□ 3.33
LSM7-205ENST00000589532 SHPRHQ149N8 1683 aa35.88■■■■□ 3.33
LSM7-205ENST00000589532 MST1RQ04912 1400 aa35.86■■■■□ 3.33
LSM7-205ENST00000589532 PRAG1Q86YV5 1406 aa35.85■■■■□ 3.33
LSM7-205ENST00000589532 ADGRL3Q9HAR2 1447 aa35.85■■■■□ 3.33
LSM7-205ENST00000589532 ATF3P18847 181 aa35.85■■■■□ 3.33
LSM7-205ENST00000589532 ASXL1Q8IXJ9 1541 aa35.84■■■■□ 3.33
LSM7-205ENST00000589532 LRP6O75581 1613 aa35.84■■■■□ 3.33
LSM7-205ENST00000589532 NHSL1Q5SYE7 1610 aa35.83■■■■□ 3.33
LSM7-205ENST00000589532 TRIM52Q96A61 297 aa35.83■■■■□ 3.33
LSM7-205ENST00000589532 PTCH1Q13635 1447 aa35.83■■■■□ 3.33
LSM7-205ENST00000589532 SLC4A1APQ9BWU0 796 aaKnown RBP35.82■■■■□ 3.32
LSM7-205ENST00000589532 BRINP3Q76B58 766 aa35.8■■■■□ 3.32
LSM7-205ENST00000589532 POTEAQ6S8J7 498 aa35.78■■■■□ 3.32
LSM7-205ENST00000589532 RPGRIP1LQ68CZ1 1315 aa35.75■■■■□ 3.31
LSM7-205ENST00000589532 IFT172Q9UG01 1749 aa35.74■■■■□ 3.31
LSM7-205ENST00000589532 SPATA31A6Q5VVP1 1343 aa35.73■■■■□ 3.31
LSM7-205ENST00000589532 VGFO15240 615 aaPredicted RBP35.71■■■■□ 3.31
LSM7-205ENST00000589532 SPATA31E1Q6ZUB1 1445 aa35.7■■■■□ 3.31
LSM7-205ENST00000589532 ROBO2Q9HCK4 1378 aa35.7■■■■□ 3.31
LSM7-205ENST00000589532 SETD5Q9C0A6 1442 aa35.69■■■■□ 3.3
LSM7-205ENST00000589532 LAMC1P11047 1609 aa35.68■■■■□ 3.3
LSM7-205ENST00000589532 FOXD1Q16676 465 aa35.68■■■■□ 3.3
LSM7-205ENST00000589532 CCDC144AA2RUR9 1427 aa35.66■■■■□ 3.3
LSM7-205ENST00000589532 C1orf167Q5SNV9 1468 aa35.62■■■■□ 3.29
LSM7-205ENST00000589532 MPHOSPH9Q99550 1183 aa35.58■■■■□ 3.29
LSM7-205ENST00000589532 CDC42BPGQ6DT37 1551 aa35.57■■■■□ 3.28
LSM7-205ENST00000589532 ADGRF5Q8IZF2 1346 aa35.56■■■■□ 3.28
LSM7-205ENST00000589532 TECPR2O15040 1411 aa35.55■■■■□ 3.28
LSM7-205ENST00000589532 KNDC1Q76NI1 1749 aa35.54■■■■□ 3.28
LSM7-205ENST00000589532 PIK3C2GO75747 1445 aa35.53■■■■□ 3.28
LSM7-205ENST00000589532 PNPLA6Q8IY17 1366 aa35.51■■■■□ 3.28
LSM7-205ENST00000589532 ANKRD30BQ9BXX2 1392 aa35.51■■■■□ 3.28
LSM7-205ENST00000589532 DDX17Q92841 729 aaKnown RBP35.5■■■■□ 3.27
LSM7-205ENST00000589532 MEX3CQ5U5Q3 659 aaKnown RBP35.46■■■■□ 3.27
LSM7-205ENST00000589532 LRRC59Q96AG4 307 aaKnown RBP35.46■■■■□ 3.27
LSM7-205ENST00000589532 NRXN1Q9ULB1 1477 aa35.44■■■■□ 3.26
LSM7-205ENST00000589532 ZNF772Q68DY9 489 aaPredicted RBP35.44■■■■□ 3.26
LSM7-205ENST00000589532 LRPPRCP42704 1394 aaKnown RBP35.43■■■■□ 3.26
LSM7-205ENST00000589532 RGL3Q3MIN7 710 aa35.42■■■■□ 3.26
LSM7-205ENST00000589532 SOS2Q07890 1332 aaPredicted RBP35.41■■■■□ 3.26
LSM7-205ENST00000589532 ACIN1Q9UKV3 1341 aaKnown RBP35.41■■■■□ 3.26
LSM7-205ENST00000589532 ORAI2Q96SN7 254 aa35.41■■■■□ 3.26
LSM7-205ENST00000589532 MYOM2P54296 1465 aa35.41■■■■□ 3.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms