RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 CCDC18Q5T9S5 1454 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 APBB1O00213 710 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 ITGAEP38570 1179 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 RGS22Q8NE09 1264 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 KCNV2Q8TDN2 545 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 KCNH8Q96L42 1107 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 TRIM35Q9UPQ4 493 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 TRPC6Q9Y210 931 aa4.58□□□□□ -1.68
LINC01539-203ENST00000589447 CDK13Q14004 1512 aaKnown RBP4.57□□□□□ -1.68
LINC01539-203ENST00000589447 MAGI3Q5TCQ9 1506 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 RAD21O60216 631 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 ZMYND10O75800 440 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 PYGBP11216 843 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 TRIM52Q96A61 297 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 TMEM106CQ9BVX2 250 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 SCUBE2Q9NQ36 999 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 PPP4R2Q9NY27 417 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 CIZ1Q9ULV3 898 aaPredicted RBP4.57□□□□□ -1.68
LINC01539-203ENST00000589447 CDC42BPBQ9Y5S2 1711 aa4.57□□□□□ -1.68
LINC01539-203ENST00000589447 ZMYM4Q5VZL5 1548 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 NCOA2Q15596 1464 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 TEX14Q8IWB6 1497 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 CARMIL2Q6F5E8 1435 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 PHLDB1Q86UU1 1377 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 CDC42BPAQ5VT25 1732 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 FLIIQ13045 1269 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 ABCA6Q8N139 1617 aa4.56□□□□□ -1.68
LINC01539-203ENST00000589447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.56□□□□□ -1.68
LINC01539-203ENST00000589447 HFM1A2PYH4 1435 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 CASKIN1Q8WXD9 1431 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 CNTLNQ9NXG0 1405 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 STRCQ7RTU9 1775 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 ITSN2Q9NZM3 1697 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 SEC24BO95487 1268 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 HNRNPUQ00839 825 aaKnown RBP eCLIP4.55□□□□□ -1.68
LINC01539-203ENST00000589447 FAM50AQ14320 339 aaKnown RBP4.55□□□□□ -1.68
LINC01539-203ENST00000589447 RTL5Q5HYW3 569 aaPredicted RBP4.55□□□□□ -1.68
LINC01539-203ENST00000589447 OTUD5Q96G74 571 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 WDR70Q9NW82 654 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 CFAP74Q9C0B2 1584 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 EHBP1L1Q8N3D4 1523 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 ARAP3Q8WWN8 1544 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 ATP10BO94823 1461 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 LMTK3Q96Q04 1460 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 FHOD3Q2V2M9 1422 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 FMN1Q68DA7 1419 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 FGD6Q6ZV73 1430 aa4.55□□□□□ -1.68
LINC01539-203ENST00000589447 PREX1Q8TCU6 1659 aa4.54□□□□□ -1.68
LINC01539-203ENST00000589447 PREX2Q70Z35 1606 aa4.54□□□□□ -1.68
LINC01539-203ENST00000589447 POTEB2H3BUK9 544 aa4.54□□□□□ -1.68
LINC01539-203ENST00000589447 DEKP35659 375 aaKnown RBP4.54□□□□□ -1.68
LINC01539-203ENST00000589447 PDAP1Q13442 181 aaKnown RBP4.54□□□□□ -1.68
LINC01539-203ENST00000589447 ARHGEF1Q92888 912 aaKnown RBP4.54□□□□□ -1.68
LINC01539-203ENST00000589447 SIN3AQ96ST3 1273 aa4.54□□□□□ -1.68
LINC01539-203ENST00000589447 NOP58Q9Y2X3 529 aaKnown RBP4.54□□□□□ -1.68
LINC01539-203ENST00000589447 C3P01024 1663 aa4.54□□□□□ -1.68
LINC01539-203ENST00000589447 PLCG2P16885 1265 aa4.53□□□□□ -1.68
LINC01539-203ENST00000589447 ANP32AP39687 249 aaKnown RBP4.53□□□□□ -1.68
LINC01539-203ENST00000589447 IRX5P78411 483 aaPredicted RBP4.53□□□□□ -1.68
LINC01539-203ENST00000589447 BARGINQ6ZT62 677 aa4.53□□□□□ -1.68
LINC01539-203ENST00000589447 RNF25Q96BH1 459 aaPredicted RBP4.53□□□□□ -1.68
LINC01539-203ENST00000589447 AKNAQ7Z591 1439 aa4.53□□□□□ -1.68
LINC01539-203ENST00000589447 DIP2CQ9Y2E4 1556 aa4.53□□□□□ -1.69
LINC01539-203ENST00000589447 ZBED9Q6R2W3 1325 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 PTPRMP28827 1452 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 POTEFA5A3E0 1075 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 A6NJR5 290 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 ARID3CA6NKF2 412 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 GOLGA2Q08379 1002 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 TMCO4Q5TGY1 634 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 ILDR1Q86SU0 546 aaPredicted RBP4.52□□□□□ -1.69
LINC01539-203ENST00000589447 PCDHB8Q9UN66 801 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 CD109Q6YHK3 1445 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 KDM5CP41229 1560 aa4.52□□□□□ -1.69
LINC01539-203ENST00000589447 KIDINS220Q9ULH0 1771 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 TESPA1A2RU30 521 aaPredicted RBP4.51□□□□□ -1.69
LINC01539-203ENST00000589447 POTEMA6NI47 508 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 RIOK3O14730 519 aaKnown RBP4.51□□□□□ -1.69
LINC01539-203ENST00000589447 PSEN1P49768 467 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 MKRN3Q13064 507 aaKnown RBP4.51□□□□□ -1.69
LINC01539-203ENST00000589447 AK7Q96M32 723 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 OCEL1Q9H607 264 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 COLQQ9Y215 455 aaPredicted RBP4.51□□□□□ -1.69
LINC01539-203ENST00000589447 MYOM3Q5VTT5 1437 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 YEATS2Q9ULM3 1422 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 ZFYVE16Q7Z3T8 1539 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 ZNF142P52746 1687 aaPredicted RBP4.51□□□□□ -1.69
LINC01539-203ENST00000589447 ADGBQ8N7X0 1667 aa4.51□□□□□ -1.69
LINC01539-203ENST00000589447 NAIPQ13075 1403 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 SMG6Q86US8 1419 aaKnown RBP4.5□□□□□ -1.69
LINC01539-203ENST00000589447 E9PSI1 815 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 CCDC82Q8N4S0 544 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 IL27Q8NEV9 243 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 MTMR7Q9Y216 660 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 ARHGEF12Q9NZN5 1544 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 MTUS2Q5JR59 1369 aa4.5□□□□□ -1.69
LINC01539-203ENST00000589447 TCOF1Q13428 1488 aaKnown RBP4.49□□□□□ -1.69
LINC01539-203ENST00000589447 NEO1Q92859 1461 aa4.49□□□□□ -1.69
LINC01539-203ENST00000589447 NCOA1Q15788 1441 aa4.49□□□□□ -1.69
LINC01539-203ENST00000589447 VGFO15240 615 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms