RNA–Protein interactions for RNA: ENST00000589429.5

U2AF1L4-212, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 4

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-212ENST00000589429 KIF1BO60333 1816 aa23.32■■□□□ 1.32
U2AF1L4-212ENST00000589429 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
U2AF1L4-212ENST00000589429 TXNDC2Q86VQ3 553 aa23.29■■□□□ 1.32
U2AF1L4-212ENST00000589429 CPS1P31327 1500 aa23.28■■□□□ 1.32
U2AF1L4-212ENST00000589429 LTKP29376 864 aa23.27■■□□□ 1.32
U2AF1L4-212ENST00000589429 EID1Q9Y6B2 187 aa23.27■■□□□ 1.32
U2AF1L4-212ENST00000589429 DHX57Q6P158 1386 aaKnown RBP23.24■■□□□ 1.31
U2AF1L4-212ENST00000589429 CCDC144AA2RUR9 1427 aa23.24■■□□□ 1.31
U2AF1L4-212ENST00000589429 SCAF1Q9H7N4 1312 aaKnown RBP23.23■■□□□ 1.31
U2AF1L4-212ENST00000589429 RIMS2Q9UQ26 1411 aa23.23■■□□□ 1.31
U2AF1L4-212ENST00000589429 STRCP1A6NGW2 1772 aa23.22■■□□□ 1.31
U2AF1L4-212ENST00000589429 ANKRD30BQ9BXX2 1392 aa23.22■■□□□ 1.31
U2AF1L4-212ENST00000589429 PIP4K2BP78356 416 aa23.2■■□□□ 1.3
U2AF1L4-212ENST00000589429 FOXD1Q16676 465 aa23.2■■□□□ 1.3
U2AF1L4-212ENST00000589429 DIP2AQ14689 1571 aa23.18■■□□□ 1.3
U2AF1L4-212ENST00000589429 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
U2AF1L4-212ENST00000589429 PLEKHG1Q9ULL1 1385 aa23.17■■□□□ 1.3
U2AF1L4-212ENST00000589429 TOM1O60784 492 aa23.17■■□□□ 1.3
U2AF1L4-212ENST00000589429 NWD1Q149M9 1564 aa23.16■■□□□ 1.3
U2AF1L4-212ENST00000589429 CLSPNQ9HAW4 1339 aa23.15■■□□□ 1.3
U2AF1L4-212ENST00000589429 PPLO60437 1756 aa23.15■■□□□ 1.3
U2AF1L4-212ENST00000589429 CHGAP10645 457 aaKnown RBP23.14■■□□□ 1.29
U2AF1L4-212ENST00000589429 NRXN3Q9Y4C0 1643 aa23.14■■□□□ 1.29
U2AF1L4-212ENST00000589429 BCANQ96GW7 911 aa23.13■■□□□ 1.29
U2AF1L4-212ENST00000589429 SENP3Q9H4L4 574 aaPredicted RBP23.13■■□□□ 1.29
U2AF1L4-212ENST00000589429 SETBP1Q9Y6X0 1596 aa23.13■■□□□ 1.29
U2AF1L4-212ENST00000589429 IFT172Q9UG01 1749 aa23.13■■□□□ 1.29
U2AF1L4-212ENST00000589429 DISP3Q9P2K9 1392 aa23.13■■□□□ 1.29
U2AF1L4-212ENST00000589429 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
U2AF1L4-212ENST00000589429 HDGFP51858 240 aaKnown RBP23.11■■□□□ 1.29
U2AF1L4-212ENST00000589429 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.11■■□□□ 1.29
U2AF1L4-212ENST00000589429 SLC26A8Q96RN1 970 aa23.11■■□□□ 1.29
U2AF1L4-212ENST00000589429 CHD2O14647 1828 aaKnown RBP23.1■■□□□ 1.29
U2AF1L4-212ENST00000589429 PPP1R15AO75807 674 aaPredicted RBP23.09■■□□□ 1.29
U2AF1L4-212ENST00000589429 XIRP1Q702N8 1843 aaKnown RBP23.08■■□□□ 1.29
U2AF1L4-212ENST00000589429 SPATA31E1Q6ZUB1 1445 aa23.08■■□□□ 1.28
U2AF1L4-212ENST00000589429 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.28
U2AF1L4-212ENST00000589429 NKTRP30414 1462 aaKnown RBP23.07■■□□□ 1.28
U2AF1L4-212ENST00000589429 ADAMTS13Q76LX8 1427 aa23.07■■□□□ 1.28
U2AF1L4-212ENST00000589429 HSPA1LP34931 641 aa23.06■■□□□ 1.28
U2AF1L4-212ENST00000589429 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
U2AF1L4-212ENST00000589429 ZNF326Q5BKZ1 582 aaKnown RBP23.03■■□□□ 1.28
U2AF1L4-212ENST00000589429 ALKQ9UM73 1620 aa23.02■■□□□ 1.28
U2AF1L4-212ENST00000589429 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
U2AF1L4-212ENST00000589429 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
U2AF1L4-212ENST00000589429 KCNA6P17658 529 aa23.01■■□□□ 1.27
U2AF1L4-212ENST00000589429 XRN1Q8IZH2 1706 aaKnown RBP23.01■■□□□ 1.27
U2AF1L4-212ENST00000589429 CCER1Q8TC90 406 aaPredicted RBP23■■□□□ 1.27
U2AF1L4-212ENST00000589429 PIK3R4Q99570 1358 aa23■■□□□ 1.27
U2AF1L4-212ENST00000589429 RBM33Q96EV2 1170 aaKnown RBP22.99■■□□□ 1.27
U2AF1L4-212ENST00000589429 PROSER2Q86WR7 435 aaPredicted RBP22.98■■□□□ 1.27
U2AF1L4-212ENST00000589429 TMEM94Q12767 1356 aa22.98■■□□□ 1.27
U2AF1L4-212ENST00000589429 VGFO15240 615 aaPredicted RBP22.97■■□□□ 1.27
U2AF1L4-212ENST00000589429 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
U2AF1L4-212ENST00000589429 MYOM2P54296 1465 aa22.94■■□□□ 1.26
U2AF1L4-212ENST00000589429 RGL3Q3MIN7 710 aa22.94■■□□□ 1.26
U2AF1L4-212ENST00000589429 ILDR2Q71H61 639 aa22.94■■□□□ 1.26
U2AF1L4-212ENST00000589429 SIN3AQ96ST3 1273 aa22.92■■□□□ 1.26
U2AF1L4-212ENST00000589429 LAMC1P11047 1609 aa22.92■■□□□ 1.26
U2AF1L4-212ENST00000589429 TIMELESSQ9UNS1 1208 aa22.91■■□□□ 1.26
U2AF1L4-212ENST00000589429 NEUROD1Q13562 356 aa22.9■■□□□ 1.26
U2AF1L4-212ENST00000589429 PTPRUQ92729 1446 aa22.9■■□□□ 1.26
U2AF1L4-212ENST00000589429 TONSLQ96HA7 1378 aa22.89■■□□□ 1.25
U2AF1L4-212ENST00000589429 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
U2AF1L4-212ENST00000589429 PIK3C2GO75747 1445 aa22.88■■□□□ 1.25
U2AF1L4-212ENST00000589429 PRAG1Q86YV5 1406 aa22.88■■□□□ 1.25
U2AF1L4-212ENST00000589429 METP08581 1390 aa22.86■■□□□ 1.25
U2AF1L4-212ENST00000589429 KNDC1Q76NI1 1749 aa22.85■■□□□ 1.25
U2AF1L4-212ENST00000589429 NCOA3Q9Y6Q9 1424 aa22.85■■□□□ 1.25
U2AF1L4-212ENST00000589429 DCAF11Q8TEB1 546 aa22.85■■□□□ 1.25
U2AF1L4-212ENST00000589429 MSH6P52701 1360 aa22.85■■□□□ 1.25
U2AF1L4-212ENST00000589429 ASXL1Q8IXJ9 1541 aa22.84■■□□□ 1.25
U2AF1L4-212ENST00000589429 C14orf37Q86TY3 774 aa22.83■■□□□ 1.25
U2AF1L4-212ENST00000589429 PTCH1Q13635 1447 aa22.82■■□□□ 1.24
U2AF1L4-212ENST00000589429 MED1Q15648 1581 aaPredicted RBP22.82■■□□□ 1.24
U2AF1L4-212ENST00000589429 L3MBTL2Q969R5 705 aa22.82■■□□□ 1.24
U2AF1L4-212ENST00000589429 NALCNQ8IZF0 1738 aa22.81■■□□□ 1.24
U2AF1L4-212ENST00000589429 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.81■■□□□ 1.24
U2AF1L4-212ENST00000589429 ADGRF5Q8IZF2 1346 aa22.81■■□□□ 1.24
U2AF1L4-212ENST00000589429 FAM135BQ49AJ0 1406 aa22.8■■□□□ 1.24
U2AF1L4-212ENST00000589429 AMOTL2Q9Y2J4 779 aa22.78■■□□□ 1.24
U2AF1L4-212ENST00000589429 KDM2AQ9Y2K7 1162 aa22.77■■□□□ 1.24
U2AF1L4-212ENST00000589429 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
U2AF1L4-212ENST00000589429 SLAIN2Q9P270 581 aa22.76■■□□□ 1.23
U2AF1L4-212ENST00000589429 DCCP43146 1447 aa22.75■■□□□ 1.23
U2AF1L4-212ENST00000589429 ROBO1Q9Y6N7 1651 aa22.75■■□□□ 1.23
U2AF1L4-212ENST00000589429 KIAA1210Q9ULL0 1709 aa22.75■■□□□ 1.23
U2AF1L4-212ENST00000589429 TECPR2O15040 1411 aa22.74■■□□□ 1.23
U2AF1L4-212ENST00000589429 C14orf93Q9H972 538 aaKnown RBP22.74■■□□□ 1.23
U2AF1L4-212ENST00000589429 SOCS7O14512 581 aa22.73■■□□□ 1.23
U2AF1L4-212ENST00000589429 ADGRL3Q9HAR2 1447 aa22.73■■□□□ 1.23
U2AF1L4-212ENST00000589429 ADGRB1O14514 1584 aa22.71■■□□□ 1.23
U2AF1L4-212ENST00000589429 ATF3P18847 181 aa22.7■■□□□ 1.22
U2AF1L4-212ENST00000589429 C19orf44Q9H6X5 657 aa22.7■■□□□ 1.22
U2AF1L4-212ENST00000589429 LRPPRCP42704 1394 aaKnown RBP22.69■■□□□ 1.22
U2AF1L4-212ENST00000589429 ROBO2Q9HCK4 1378 aa22.69■■□□□ 1.22
U2AF1L4-212ENST00000589429 CADPS2Q86UW7 1296 aa22.68■■□□□ 1.22
U2AF1L4-212ENST00000589429 CDC42BPGQ6DT37 1551 aa22.67■■□□□ 1.22
U2AF1L4-212ENST00000589429 YTHDC2Q9H6S0 1430 aaKnown RBP22.67■■□□□ 1.22
U2AF1L4-212ENST00000589429 CFAP70Q5T0N1 1121 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms