RNA–Protein interactions for RNA: ENST00000589417.1

H3F3B-207, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-207ENST00000589417 RAB3GAP2Q9H2M9 1393 aa26.17■■□□□ 1.78
H3F3B-207ENST00000589417 RIMS2Q9UQ26 1411 aa26.16■■□□□ 1.78
H3F3B-207ENST00000589417 CHGAP10645 457 aaKnown RBP26.15■■□□□ 1.78
H3F3B-207ENST00000589417 CPS1P31327 1500 aa26.14■■□□□ 1.77
H3F3B-207ENST00000589417 PLEKHG1Q9ULL1 1385 aa26.13■■□□□ 1.77
H3F3B-207ENST00000589417 CLTCL1P53675 1640 aa26.08■■□□□ 1.77
H3F3B-207ENST00000589417 PPP1R15AO75807 674 aaPredicted RBP26.06■■□□□ 1.76
H3F3B-207ENST00000589417 FOXD1Q16676 465 aa26.06■■□□□ 1.76
H3F3B-207ENST00000589417 TBX22Q9Y458 520 aa26.06■■□□□ 1.76
H3F3B-207ENST00000589417 MYO5BQ9ULV0 1848 aa26.06■■□□□ 1.76
H3F3B-207ENST00000589417 SLC26A8Q96RN1 970 aa26.04■■□□□ 1.76
H3F3B-207ENST00000589417 KCNA6P17658 529 aa26.03■■□□□ 1.76
H3F3B-207ENST00000589417 RPGRIP1LQ68CZ1 1315 aa26.02■■□□□ 1.76
H3F3B-207ENST00000589417 CCDC144AA2RUR9 1427 aa26■■□□□ 1.75
H3F3B-207ENST00000589417 ADAMTS13Q76LX8 1427 aa26■■□□□ 1.75
H3F3B-207ENST00000589417 ZNF326Q5BKZ1 582 aaKnown RBP26■■□□□ 1.75
H3F3B-207ENST00000589417 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
H3F3B-207ENST00000589417 NUTM2DQ5VT03 806 aaPredicted RBP25.98■■□□□ 1.75
H3F3B-207ENST00000589417 BCANQ96GW7 911 aa25.98■■□□□ 1.75
H3F3B-207ENST00000589417 PIK3R4Q99570 1358 aa25.97■■□□□ 1.75
H3F3B-207ENST00000589417 NEXMIFQ5QGS0 1516 aa25.96■■□□□ 1.75
H3F3B-207ENST00000589417 STRCP1A6NGW2 1772 aa25.96■■□□□ 1.75
H3F3B-207ENST00000589417 SPATA31E1Q6ZUB1 1445 aa25.95■■□□□ 1.74
H3F3B-207ENST00000589417 KIF1BO60333 1816 aa25.95■■□□□ 1.74
H3F3B-207ENST00000589417 VGFO15240 615 aaPredicted RBP25.94■■□□□ 1.74
H3F3B-207ENST00000589417 DIP2AQ14689 1571 aa25.94■■□□□ 1.74
H3F3B-207ENST00000589417 SETBP1Q9Y6X0 1596 aa25.92■■□□□ 1.74
H3F3B-207ENST00000589417 ANKRD30BQ9BXX2 1392 aa25.92■■□□□ 1.74
H3F3B-207ENST00000589417 NWD1Q149M9 1564 aa25.91■■□□□ 1.74
H3F3B-207ENST00000589417 NKTRP30414 1462 aaKnown RBP25.9■■□□□ 1.74
H3F3B-207ENST00000589417 UBAP1LF5GYI3 381 aa25.89■■□□□ 1.74
H3F3B-207ENST00000589417 TOM1O60784 492 aa25.88■■□□□ 1.73
H3F3B-207ENST00000589417 NRXN3Q9Y4C0 1643 aa25.86■■□□□ 1.73
H3F3B-207ENST00000589417 TMEM94Q12767 1356 aa25.85■■□□□ 1.73
H3F3B-207ENST00000589417 PROSER2Q86WR7 435 aaPredicted RBP25.85■■□□□ 1.73
H3F3B-207ENST00000589417 SENP3Q9H4L4 574 aaPredicted RBP25.85■■□□□ 1.73
H3F3B-207ENST00000589417 NCOA3Q9Y6Q9 1424 aa25.84■■□□□ 1.73
H3F3B-207ENST00000589417 CHD2O14647 1828 aaKnown RBP25.84■■□□□ 1.73
H3F3B-207ENST00000589417 RGL3Q3MIN7 710 aa25.82■■□□□ 1.72
H3F3B-207ENST00000589417 PTPRUQ92729 1446 aa25.81■■□□□ 1.72
H3F3B-207ENST00000589417 TRIM26Q12899 539 aaPredicted RBP25.81■■□□□ 1.72
H3F3B-207ENST00000589417 AMOTL2Q9Y2J4 779 aa25.81■■□□□ 1.72
H3F3B-207ENST00000589417 METP08581 1390 aa25.81■■□□□ 1.72
H3F3B-207ENST00000589417 ALKQ9UM73 1620 aa25.79■■□□□ 1.72
H3F3B-207ENST00000589417 PPLO60437 1756 aa25.78■■□□□ 1.72
H3F3B-207ENST00000589417 ADGRF5Q8IZF2 1346 aa25.77■■□□□ 1.72
H3F3B-207ENST00000589417 XIRP1Q702N8 1843 aaKnown RBP25.75■■□□□ 1.71
H3F3B-207ENST00000589417 PRAG1Q86YV5 1406 aa25.73■■□□□ 1.71
H3F3B-207ENST00000589417 STAC3Q96MF2 364 aa25.73■■□□□ 1.71
H3F3B-207ENST00000589417 RBM33Q96EV2 1170 aaKnown RBP25.72■■□□□ 1.71
H3F3B-207ENST00000589417 NRXN1Q9ULB1 1477 aa25.72■■□□□ 1.71
H3F3B-207ENST00000589417 XRN1Q8IZH2 1706 aaKnown RBP25.71■■□□□ 1.71
H3F3B-207ENST00000589417 IFT172Q9UG01 1749 aa25.71■■□□□ 1.71
H3F3B-207ENST00000589417 PIK3C2GO75747 1445 aa25.71■■□□□ 1.71
H3F3B-207ENST00000589417 MSH6P52701 1360 aa25.7■■□□□ 1.71
H3F3B-207ENST00000589417 MYOM2P54296 1465 aa25.7■■□□□ 1.7
H3F3B-207ENST00000589417 C19orf44Q9H6X5 657 aa25.69■■□□□ 1.7
H3F3B-207ENST00000589417 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
H3F3B-207ENST00000589417 PIP4K2BP78356 416 aa25.68■■□□□ 1.7
H3F3B-207ENST00000589417 C14orf93Q9H972 538 aaKnown RBP25.67■■□□□ 1.7
H3F3B-207ENST00000589417 FAM135BQ49AJ0 1406 aa25.66■■□□□ 1.7
H3F3B-207ENST00000589417 PTCH1Q13635 1447 aa25.65■■□□□ 1.7
H3F3B-207ENST00000589417 DHX57Q6P158 1386 aaKnown RBP25.63■■□□□ 1.69
H3F3B-207ENST00000589417 CADPS2Q86UW7 1296 aa25.62■■□□□ 1.69
H3F3B-207ENST00000589417 SCAF1Q9H7N4 1312 aaKnown RBP25.62■■□□□ 1.69
H3F3B-207ENST00000589417 SLAIN2Q9P270 581 aa25.61■■□□□ 1.69
H3F3B-207ENST00000589417 DCCP43146 1447 aa25.61■■□□□ 1.69
H3F3B-207ENST00000589417 LRPPRCP42704 1394 aaKnown RBP25.6■■□□□ 1.69
H3F3B-207ENST00000589417 ABCC11Q96J66 1382 aa25.6■■□□□ 1.69
H3F3B-207ENST00000589417 ROBO2Q9HCK4 1378 aa25.6■■□□□ 1.69
H3F3B-207ENST00000589417 HSPA1LP34931 641 aa25.6■■□□□ 1.69
H3F3B-207ENST00000589417 TECPR2O15040 1411 aa25.6■■□□□ 1.69
H3F3B-207ENST00000589417 C14orf37Q86TY3 774 aa25.59■■□□□ 1.69
H3F3B-207ENST00000589417 DCAF11Q8TEB1 546 aa25.59■■□□□ 1.69
H3F3B-207ENST00000589417 SIRT1Q96EB6 747 aa25.58■■□□□ 1.69
H3F3B-207ENST00000589417 ADGRL3Q9HAR2 1447 aa25.56■■□□□ 1.68
H3F3B-207ENST00000589417 ATF3P18847 181 aa25.56■■□□□ 1.68
H3F3B-207ENST00000589417 CFAP70Q5T0N1 1121 aa25.56■■□□□ 1.68
H3F3B-207ENST00000589417 ASXL1Q8IXJ9 1541 aa25.55■■□□□ 1.68
H3F3B-207ENST00000589417 TMEM132EQ6IEE7 984 aa25.55■■□□□ 1.68
H3F3B-207ENST00000589417 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.53■■□□□ 1.68
H3F3B-207ENST00000589417 YTHDC2Q9H6S0 1430 aaKnown RBP25.53■■□□□ 1.68
H3F3B-207ENST00000589417 KDM2AQ9Y2K7 1162 aa25.52■■□□□ 1.68
H3F3B-207ENST00000589417 LAMC1P11047 1609 aa25.52■■□□□ 1.68
H3F3B-207ENST00000589417 STK26Q9P289 416 aa25.49■■□□□ 1.67
H3F3B-207ENST00000589417 ADGRB1O14514 1584 aa25.47■■□□□ 1.67
H3F3B-207ENST00000589417 MST1RQ04912 1400 aa25.46■■□□□ 1.67
H3F3B-207ENST00000589417 SIN3AQ96ST3 1273 aa25.46■■□□□ 1.67
H3F3B-207ENST00000589417 KNDC1Q76NI1 1749 aa25.45■■□□□ 1.66
H3F3B-207ENST00000589417 ROBO1Q9Y6N7 1651 aa25.45■■□□□ 1.66
H3F3B-207ENST00000589417 WAPLQ7Z5K2 1190 aa25.44■■□□□ 1.66
H3F3B-207ENST00000589417 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
H3F3B-207ENST00000589417 L3MBTL2Q969R5 705 aa25.42■■□□□ 1.66
H3F3B-207ENST00000589417 NALCNQ8IZF0 1738 aa25.42■■□□□ 1.66
H3F3B-207ENST00000589417 DLC1Q96QB1 1528 aa25.42■■□□□ 1.66
H3F3B-207ENST00000589417 PLEKHH1Q9ULM0 1364 aa25.41■■□□□ 1.66
H3F3B-207ENST00000589417 C1orf167Q5SNV9 1468 aa25.38■■□□□ 1.65
H3F3B-207ENST00000589417 CDC42BPGQ6DT37 1551 aa25.36■■□□□ 1.65
H3F3B-207ENST00000589417 NEUROD1Q13562 356 aa25.36■■□□□ 1.65
H3F3B-207ENST00000589417 PRAM1Q96QH2 718 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms