RNA–Protein interactions for RNA: ENST00000589300.1

LINC00479-204, long intergenic non-protein coding RNA 479, humanhuman

TSL 1 (best) BASIC

Gene LINC00479, Length 718 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479-204ENST00000589300 SLC26A8Q96RN1 970 aa22.47■■□□□ 1.19
LINC00479-204ENST00000589300 RIMS2Q9UQ26 1411 aa22.46■■□□□ 1.19
LINC00479-204ENST00000589300 NWD1Q149M9 1564 aa22.46■■□□□ 1.19
LINC00479-204ENST00000589300 KCNA6P17658 529 aa22.44■■□□□ 1.18
LINC00479-204ENST00000589300 PLEKHG1Q9ULL1 1385 aa22.44■■□□□ 1.18
LINC00479-204ENST00000589300 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
LINC00479-204ENST00000589300 ILDR2Q71H61 639 aa22.42■■□□□ 1.18
LINC00479-204ENST00000589300 CHD2O14647 1828 aaKnown RBP22.41■■□□□ 1.18
LINC00479-204ENST00000589300 NKTRP30414 1462 aaKnown RBP22.41■■□□□ 1.18
LINC00479-204ENST00000589300 NAIPQ13075 1403 aa22.4■■□□□ 1.18
LINC00479-204ENST00000589300 CHGAP10645 457 aaKnown RBP22.4■■□□□ 1.18
LINC00479-204ENST00000589300 HDGFP51858 240 aaKnown RBP22.4■■□□□ 1.18
LINC00479-204ENST00000589300 TMEM94Q12767 1356 aa22.39■■□□□ 1.18
LINC00479-204ENST00000589300 PPP1R15AO75807 674 aaPredicted RBP22.39■■□□□ 1.17
LINC00479-204ENST00000589300 BCANQ96GW7 911 aa22.39■■□□□ 1.17
LINC00479-204ENST00000589300 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.37■■□□□ 1.17
LINC00479-204ENST00000589300 MED1Q15648 1581 aaPredicted RBP22.37■■□□□ 1.17
LINC00479-204ENST00000589300 SENP3Q9H4L4 574 aaPredicted RBP22.36■■□□□ 1.17
LINC00479-204ENST00000589300 DIP2AQ14689 1571 aa22.34■■□□□ 1.17
LINC00479-204ENST00000589300 ADAMTS13Q76LX8 1427 aa22.34■■□□□ 1.17
LINC00479-204ENST00000589300 PROSER2Q86WR7 435 aaPredicted RBP22.34■■□□□ 1.17
LINC00479-204ENST00000589300 HFM1A2PYH4 1435 aa22.33■■□□□ 1.17
LINC00479-204ENST00000589300 TBX22Q9Y458 520 aa22.33■■□□□ 1.17
LINC00479-204ENST00000589300 NUTM2DQ5VT03 806 aaPredicted RBP22.32■■□□□ 1.16
LINC00479-204ENST00000589300 RBM33Q96EV2 1170 aaKnown RBP22.32■■□□□ 1.16
LINC00479-204ENST00000589300 CLTCL1P53675 1640 aa22.31■■□□□ 1.16
LINC00479-204ENST00000589300 TRPM2O94759 1503 aa22.31■■□□□ 1.16
LINC00479-204ENST00000589300 FAM135BQ49AJ0 1406 aa22.3■■□□□ 1.16
LINC00479-204ENST00000589300 NRXN3Q9Y4C0 1643 aa22.28■■□□□ 1.16
LINC00479-204ENST00000589300 PIK3R4Q99570 1358 aa22.27■■□□□ 1.16
LINC00479-204ENST00000589300 ROBO1Q9Y6N7 1651 aa22.27■■□□□ 1.16
LINC00479-204ENST00000589300 KIF1BO60333 1816 aa22.27■■□□□ 1.16
LINC00479-204ENST00000589300 MSH6P52701 1360 aa22.26■■□□□ 1.15
LINC00479-204ENST00000589300 SETBP1Q9Y6X0 1596 aa22.25■■□□□ 1.15
LINC00479-204ENST00000589300 SOCS7O14512 581 aa22.24■■□□□ 1.15
LINC00479-204ENST00000589300 NEXMIFQ5QGS0 1516 aa22.23■■□□□ 1.15
LINC00479-204ENST00000589300 NCOA3Q9Y6Q9 1424 aa22.23■■□□□ 1.15
LINC00479-204ENST00000589300 ZNF326Q5BKZ1 582 aaKnown RBP22.21■■□□□ 1.15
LINC00479-204ENST00000589300 TRIM52Q96A61 297 aa22.21■■□□□ 1.15
LINC00479-204ENST00000589300 PTPRUQ92729 1446 aa22.21■■□□□ 1.15
LINC00479-204ENST00000589300 XRN1Q8IZH2 1706 aaKnown RBP22.2■■□□□ 1.14
LINC00479-204ENST00000589300 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.2■■□□□ 1.14
LINC00479-204ENST00000589300 SLC4A1APQ9BWU0 796 aaKnown RBP22.17■■□□□ 1.14
LINC00479-204ENST00000589300 SLAIN2Q9P270 581 aa22.17■■□□□ 1.14
LINC00479-204ENST00000589300 AMOTL2Q9Y2J4 779 aa22.16■■□□□ 1.14
LINC00479-204ENST00000589300 PHLPP1O60346 1717 aa22.14■■□□□ 1.14
LINC00479-204ENST00000589300 METP08581 1390 aa22.13■■□□□ 1.13
LINC00479-204ENST00000589300 C14orf37Q86TY3 774 aa22.13■■□□□ 1.13
LINC00479-204ENST00000589300 PHF23Q9BUL5 403 aaPredicted RBP22.13■■□□□ 1.13
LINC00479-204ENST00000589300 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
LINC00479-204ENST00000589300 SETD1AO15047 1707 aaKnown RBP22.11■■□□□ 1.13
LINC00479-204ENST00000589300 PPLO60437 1756 aa22.11■■□□□ 1.13
LINC00479-204ENST00000589300 CADPS2Q86UW7 1296 aa22.1■■□□□ 1.13
LINC00479-204ENST00000589300 COL16A1Q07092 1604 aaPredicted RBP22.09■■□□□ 1.13
LINC00479-204ENST00000589300 DCCP43146 1447 aa22.07■■□□□ 1.12
LINC00479-204ENST00000589300 ATF3P18847 181 aa22.07■■□□□ 1.12
LINC00479-204ENST00000589300 FOXD1Q16676 465 aa22.07■■□□□ 1.12
LINC00479-204ENST00000589300 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
LINC00479-204ENST00000589300 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
LINC00479-204ENST00000589300 AHDC1Q5TGY3 1603 aaPredicted RBP22.05■■□□□ 1.12
LINC00479-204ENST00000589300 NALCNQ8IZF0 1738 aa22.04■■□□□ 1.12
LINC00479-204ENST00000589300 MPHOSPH9Q99550 1183 aa22.03■■□□□ 1.12
LINC00479-204ENST00000589300 RGS17Q9UGC6 210 aaPredicted RBP22.03■■□□□ 1.12
LINC00479-204ENST00000589300 JCADQ9P266 1359 aa22.01■■□□□ 1.11
LINC00479-204ENST00000589300 IFT172Q9UG01 1749 aa22.01■■□□□ 1.11
LINC00479-204ENST00000589300 CCDC144AA2RUR9 1427 aa22.01■■□□□ 1.11
LINC00479-204ENST00000589300 ADGRL3Q9HAR2 1447 aa22.01■■□□□ 1.11
LINC00479-204ENST00000589300 MST1RQ04912 1400 aa22■■□□□ 1.11
LINC00479-204ENST00000589300 PTCH1Q13635 1447 aa21.99■■□□□ 1.11
LINC00479-204ENST00000589300 SPATA31E1Q6ZUB1 1445 aa21.99■■□□□ 1.11
LINC00479-204ENST00000589300 PRAG1Q86YV5 1406 aa21.99■■□□□ 1.11
LINC00479-204ENST00000589300 SETD5Q9C0A6 1442 aa21.98■■□□□ 1.11
LINC00479-204ENST00000589300 ASXL1Q8IXJ9 1541 aa21.98■■□□□ 1.11
LINC00479-204ENST00000589300 BRINP3Q76B58 766 aa21.98■■□□□ 1.11
LINC00479-204ENST00000589300 SHPRHQ149N8 1683 aa21.98■■□□□ 1.11
LINC00479-204ENST00000589300 NHSL1Q5SYE7 1610 aa21.96■■□□□ 1.11
LINC00479-204ENST00000589300 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
LINC00479-204ENST00000589300 ROBO2Q9HCK4 1378 aa21.95■■□□□ 1.1
LINC00479-204ENST00000589300 ADGRF5Q8IZF2 1346 aa21.92■■□□□ 1.1
LINC00479-204ENST00000589300 LRP6O75581 1613 aa21.91■■□□□ 1.1
LINC00479-204ENST00000589300 ANKRD30BQ9BXX2 1392 aa21.91■■□□□ 1.1
LINC00479-204ENST00000589300 SPATA31A6Q5VVP1 1343 aa21.91■■□□□ 1.1
LINC00479-204ENST00000589300 RGL3Q3MIN7 710 aa21.91■■□□□ 1.1
LINC00479-204ENST00000589300 RAB3GAP2Q9H2M9 1393 aa21.9■■□□□ 1.1
LINC00479-204ENST00000589300 POTEAQ6S8J7 498 aa21.89■■□□□ 1.09
LINC00479-204ENST00000589300 C1orf167Q5SNV9 1468 aa21.88■■□□□ 1.09
LINC00479-204ENST00000589300 PIK3C2GO75747 1445 aa21.87■■□□□ 1.09
LINC00479-204ENST00000589300 LAMC1P11047 1609 aa21.87■■□□□ 1.09
LINC00479-204ENST00000589300 KNDC1Q76NI1 1749 aa21.86■■□□□ 1.09
LINC00479-204ENST00000589300 TECPR2O15040 1411 aa21.85■■□□□ 1.09
LINC00479-204ENST00000589300 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
LINC00479-204ENST00000589300 DDX17Q92841 729 aaKnown RBP21.82■■□□□ 1.08
LINC00479-204ENST00000589300 LRPPRCP42704 1394 aaKnown RBP21.82■■□□□ 1.08
LINC00479-204ENST00000589300 MYOM2P54296 1465 aa21.81■■□□□ 1.08
LINC00479-204ENST00000589300 NRXN1Q9ULB1 1477 aa21.81■■□□□ 1.08
LINC00479-204ENST00000589300 ABCC11Q96J66 1382 aa21.8■■□□□ 1.08
LINC00479-204ENST00000589300 LRRC59Q96AG4 307 aaKnown RBP21.8■■□□□ 1.08
LINC00479-204ENST00000589300 MEX3CQ5U5Q3 659 aaKnown RBP21.79■■□□□ 1.08
LINC00479-204ENST00000589300 TMEM132EQ6IEE7 984 aa21.78■■□□□ 1.08
LINC00479-204ENST00000589300 ORAI2Q96SN7 254 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms