RNA–Protein interactions for RNA: ENST00000589158.1

CLPTM1-210, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 749 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-210ENST00000589158 FOXD1Q16676 465 aa20.96■□□□□ 0.95
CLPTM1-210ENST00000589158 ZNF326Q5BKZ1 582 aaKnown RBP20.96■□□□□ 0.95
CLPTM1-210ENST00000589158 NUTM2DQ5VT03 806 aaPredicted RBP20.96■□□□□ 0.95
CLPTM1-210ENST00000589158 SLC26A8Q96RN1 970 aa20.96■□□□□ 0.95
CLPTM1-210ENST00000589158 ZFYVE9O95405 1425 aa20.95■□□□□ 0.95
CLPTM1-210ENST00000589158 RAB3GAP2Q9H2M9 1393 aa20.95■□□□□ 0.94
CLPTM1-210ENST00000589158 SPHKAPQ2M3C7 1700 aa20.95■□□□□ 0.94
CLPTM1-210ENST00000589158 IQSEC2Q5JU85 1478 aa20.94■□□□□ 0.94
CLPTM1-210ENST00000589158 TRPM2O94759 1503 aa20.94■□□□□ 0.94
CLPTM1-210ENST00000589158 CPS1P31327 1500 aa20.94■□□□□ 0.94
CLPTM1-210ENST00000589158 PLEKHG1Q9ULL1 1385 aa20.91■□□□□ 0.94
CLPTM1-210ENST00000589158 UBAP1LF5GYI3 381 aa20.89■□□□□ 0.93
CLPTM1-210ENST00000589158 CLTCL1P53675 1640 aa20.89■□□□□ 0.93
CLPTM1-210ENST00000589158 MYO5BQ9ULV0 1848 aa20.88■□□□□ 0.93
CLPTM1-210ENST00000589158 KCNA6P17658 529 aa20.85■□□□□ 0.93
CLPTM1-210ENST00000589158 TBX22Q9Y458 520 aa20.84■□□□□ 0.93
CLPTM1-210ENST00000589158 LRRC7Q96NW7 1537 aa20.83■□□□□ 0.93
CLPTM1-210ENST00000589158 CCDC144AA2RUR9 1427 aa20.83■□□□□ 0.93
CLPTM1-210ENST00000589158 HRCP23327 699 aa20.82■□□□□ 0.92
CLPTM1-210ENST00000589158 TOM1O60784 492 aa20.81■□□□□ 0.92
CLPTM1-210ENST00000589158 STRCP1A6NGW2 1772 aa20.8■□□□□ 0.92
CLPTM1-210ENST00000589158 PROSER2Q86WR7 435 aaPredicted RBP20.8■□□□□ 0.92
CLPTM1-210ENST00000589158 SCAF1Q9H7N4 1312 aaKnown RBP20.79■□□□□ 0.92
CLPTM1-210ENST00000589158 ADAMTS13Q76LX8 1427 aa20.79■□□□□ 0.92
CLPTM1-210ENST00000589158 RPGRIP1LQ68CZ1 1315 aa20.78■□□□□ 0.92
CLPTM1-210ENST00000589158 VGFO15240 615 aaPredicted RBP20.78■□□□□ 0.92
CLPTM1-210ENST00000589158 PIP4K2BP78356 416 aa20.78■□□□□ 0.92
CLPTM1-210ENST00000589158 RGL3Q3MIN7 710 aa20.78■□□□□ 0.92
CLPTM1-210ENST00000589158 RBM33Q96EV2 1170 aaKnown RBP20.77■□□□□ 0.92
CLPTM1-210ENST00000589158 NEXMIFQ5QGS0 1516 aa20.77■□□□□ 0.92
CLPTM1-210ENST00000589158 KIF1BO60333 1816 aa20.76■□□□□ 0.91
CLPTM1-210ENST00000589158 TMEM94Q12767 1356 aa20.76■□□□□ 0.91
CLPTM1-210ENST00000589158 DIP2AQ14689 1571 aa20.74■□□□□ 0.91
CLPTM1-210ENST00000589158 PIK3R4Q99570 1358 aa20.73■□□□□ 0.91
CLPTM1-210ENST00000589158 NKTRP30414 1462 aaKnown RBP20.73■□□□□ 0.91
CLPTM1-210ENST00000589158 AMOTL2Q9Y2J4 779 aa20.72■□□□□ 0.91
CLPTM1-210ENST00000589158 NWD1Q149M9 1564 aa20.72■□□□□ 0.91
CLPTM1-210ENST00000589158 SETBP1Q9Y6X0 1596 aa20.72■□□□□ 0.91
CLPTM1-210ENST00000589158 SPATA31E1Q6ZUB1 1445 aa20.71■□□□□ 0.91
CLPTM1-210ENST00000589158 METP08581 1390 aa20.69■□□□□ 0.9
CLPTM1-210ENST00000589158 C14orf37Q86TY3 774 aa20.68■□□□□ 0.9
CLPTM1-210ENST00000589158 ANKRD30BQ9BXX2 1392 aa20.68■□□□□ 0.9
CLPTM1-210ENST00000589158 PTPRUQ92729 1446 aa20.68■□□□□ 0.9
CLPTM1-210ENST00000589158 NRXN3Q9Y4C0 1643 aa20.67■□□□□ 0.9
CLPTM1-210ENST00000589158 ADGRF5Q8IZF2 1346 aa20.66■□□□□ 0.9
CLPTM1-210ENST00000589158 CHD2O14647 1828 aaKnown RBP20.66■□□□□ 0.9
CLPTM1-210ENST00000589158 MSH6P52701 1360 aa20.65■□□□□ 0.9
CLPTM1-210ENST00000589158 ALKQ9UM73 1620 aa20.64■□□□□ 0.89
CLPTM1-210ENST00000589158 HSPA1LP34931 641 aa20.62■□□□□ 0.89
CLPTM1-210ENST00000589158 TRIM26Q12899 539 aaPredicted RBP20.62■□□□□ 0.89
CLPTM1-210ENST00000589158 PPLO60437 1756 aa20.62■□□□□ 0.89
CLPTM1-210ENST00000589158 XIRP1Q702N8 1843 aaKnown RBP20.61■□□□□ 0.89
CLPTM1-210ENST00000589158 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
CLPTM1-210ENST00000589158 C19orf44Q9H6X5 657 aa20.58■□□□□ 0.89
CLPTM1-210ENST00000589158 ATF3P18847 181 aa20.57■□□□□ 0.88
CLPTM1-210ENST00000589158 SLAIN2Q9P270 581 aa20.57■□□□□ 0.88
CLPTM1-210ENST00000589158 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
CLPTM1-210ENST00000589158 CADPS2Q86UW7 1296 aa20.55■□□□□ 0.88
CLPTM1-210ENST00000589158 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
CLPTM1-210ENST00000589158 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
CLPTM1-210ENST00000589158 PIK3C2GO75747 1445 aa20.54■□□□□ 0.88
CLPTM1-210ENST00000589158 STK26Q9P289 416 aa20.54■□□□□ 0.88
CLPTM1-210ENST00000589158 FAM135BQ49AJ0 1406 aa20.53■□□□□ 0.88
CLPTM1-210ENST00000589158 TMEM132EQ6IEE7 984 aa20.53■□□□□ 0.88
CLPTM1-210ENST00000589158 IFT172Q9UG01 1749 aa20.53■□□□□ 0.88
CLPTM1-210ENST00000589158 MYOM2P54296 1465 aa20.52■□□□□ 0.88
CLPTM1-210ENST00000589158 ROBO2Q9HCK4 1378 aa20.52■□□□□ 0.88
CLPTM1-210ENST00000589158 CFAP70Q5T0N1 1121 aa20.51■□□□□ 0.87
CLPTM1-210ENST00000589158 C14orf93Q9H972 538 aaKnown RBP20.51■□□□□ 0.87
CLPTM1-210ENST00000589158 SETD1AO15047 1707 aaKnown RBP20.5■□□□□ 0.87
CLPTM1-210ENST00000589158 PTCH1Q13635 1447 aa20.5■□□□□ 0.87
CLPTM1-210ENST00000589158 NRXN1Q9ULB1 1477 aa20.49■□□□□ 0.87
CLPTM1-210ENST00000589158 LRPPRCP42704 1394 aaKnown RBP20.48■□□□□ 0.87
CLPTM1-210ENST00000589158 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
CLPTM1-210ENST00000589158 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
CLPTM1-210ENST00000589158 STAC3Q96MF2 364 aa20.47■□□□□ 0.87
CLPTM1-210ENST00000589158 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.47■□□□□ 0.87
CLPTM1-210ENST00000589158 DCCP43146 1447 aa20.46■□□□□ 0.87
CLPTM1-210ENST00000589158 PRAG1Q86YV5 1406 aa20.45■□□□□ 0.86
CLPTM1-210ENST00000589158 WAPLQ7Z5K2 1190 aa20.45■□□□□ 0.86
CLPTM1-210ENST00000589158 ABCC11Q96J66 1382 aa20.45■□□□□ 0.86
CLPTM1-210ENST00000589158 ROBO1Q9Y6N7 1651 aa20.45■□□□□ 0.86
CLPTM1-210ENST00000589158 YTHDC2Q9H6S0 1430 aaKnown RBP20.44■□□□□ 0.86
CLPTM1-210ENST00000589158 ASXL1Q8IXJ9 1541 aa20.44■□□□□ 0.86
CLPTM1-210ENST00000589158 SIN3AQ96ST3 1273 aa20.43■□□□□ 0.86
CLPTM1-210ENST00000589158 NEUROD1Q13562 356 aa20.42■□□□□ 0.86
CLPTM1-210ENST00000589158 DISP3Q9P2K9 1392 aa20.42■□□□□ 0.86
CLPTM1-210ENST00000589158 TECPR2O15040 1411 aa20.42■□□□□ 0.86
CLPTM1-210ENST00000589158 MST1RQ04912 1400 aa20.4■□□□□ 0.86
CLPTM1-210ENST00000589158 BRINP3Q76B58 766 aa20.4■□□□□ 0.86
CLPTM1-210ENST00000589158 LAMC1P11047 1609 aa20.39■□□□□ 0.86
CLPTM1-210ENST00000589158 PLEKHH1Q9ULM0 1364 aa20.39■□□□□ 0.85
CLPTM1-210ENST00000589158 NALCNQ8IZF0 1738 aa20.39■□□□□ 0.85
CLPTM1-210ENST00000589158 SIRT1Q96EB6 747 aa20.38■□□□□ 0.85
CLPTM1-210ENST00000589158 PRAM1Q96QH2 718 aa20.36■□□□□ 0.85
CLPTM1-210ENST00000589158 POGKQ9P215 609 aa20.36■□□□□ 0.85
CLPTM1-210ENST00000589158 TRAK1Q9UPV9 953 aa20.36■□□□□ 0.85
CLPTM1-210ENST00000589158 SAFB2Q14151 953 aaKnown RBP eCLIP20.35■□□□□ 0.85
CLPTM1-210ENST00000589158 L3MBTL2Q969R5 705 aa20.35■□□□□ 0.85
CLPTM1-210ENST00000589158 C1orf167Q5SNV9 1468 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms