RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 SENP3Q9H4L4 574 aaPredicted RBP20.33■□□□□ 0.85
PRKCSH-208ENST00000589126 PLEKHG1Q9ULL1 1385 aa20.32■□□□□ 0.84
PRKCSH-208ENST00000589126 NUTM2DQ5VT03 806 aaPredicted RBP20.31■□□□□ 0.84
PRKCSH-208ENST00000589126 TRPM2O94759 1503 aa20.31■□□□□ 0.84
PRKCSH-208ENST00000589126 CLTCL1P53675 1640 aa20.31■□□□□ 0.84
PRKCSH-208ENST00000589126 ALKQ9UM73 1620 aa20.3■□□□□ 0.84
PRKCSH-208ENST00000589126 PPP1R15AO75807 674 aaPredicted RBP20.29■□□□□ 0.84
PRKCSH-208ENST00000589126 HDGFP51858 240 aaKnown RBP20.29■□□□□ 0.84
PRKCSH-208ENST00000589126 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
PRKCSH-208ENST00000589126 XIRP1Q702N8 1843 aaKnown RBP20.28■□□□□ 0.84
PRKCSH-208ENST00000589126 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.28■□□□□ 0.84
PRKCSH-208ENST00000589126 BCANQ96GW7 911 aa20.28■□□□□ 0.84
PRKCSH-208ENST00000589126 KCNA6P17658 529 aa20.27■□□□□ 0.84
PRKCSH-208ENST00000589126 ADAMTS13Q76LX8 1427 aa20.26■□□□□ 0.83
PRKCSH-208ENST00000589126 NWD1Q149M9 1564 aa20.25■□□□□ 0.83
PRKCSH-208ENST00000589126 TOM1O60784 492 aa20.25■□□□□ 0.83
PRKCSH-208ENST00000589126 PIP4K2BP78356 416 aa20.24■□□□□ 0.83
PRKCSH-208ENST00000589126 FOXD1Q16676 465 aa20.24■□□□□ 0.83
PRKCSH-208ENST00000589126 SETD5Q9C0A6 1442 aa20.23■□□□□ 0.83
PRKCSH-208ENST00000589126 TBX22Q9Y458 520 aa20.23■□□□□ 0.83
PRKCSH-208ENST00000589126 CHD2O14647 1828 aaKnown RBP20.22■□□□□ 0.83
PRKCSH-208ENST00000589126 TMEM94Q12767 1356 aa20.21■□□□□ 0.83
PRKCSH-208ENST00000589126 KIF1BO60333 1816 aa20.21■□□□□ 0.83
PRKCSH-208ENST00000589126 ZNF326Q5BKZ1 582 aaKnown RBP20.21■□□□□ 0.83
PRKCSH-208ENST00000589126 NEXMIFQ5QGS0 1516 aa20.21■□□□□ 0.83
PRKCSH-208ENST00000589126 SCAF1Q9H7N4 1312 aaKnown RBP20.21■□□□□ 0.83
PRKCSH-208ENST00000589126 NRXN3Q9Y4C0 1643 aa20.2■□□□□ 0.82
PRKCSH-208ENST00000589126 NKTRP30414 1462 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-208ENST00000589126 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
PRKCSH-208ENST00000589126 MPHOSPH9Q99550 1183 aa20.2■□□□□ 0.82
PRKCSH-208ENST00000589126 DIP2AQ14689 1571 aa20.2■□□□□ 0.82
PRKCSH-208ENST00000589126 PROSER2Q86WR7 435 aaPredicted RBP20.18■□□□□ 0.82
PRKCSH-208ENST00000589126 RAB3GAP2Q9H2M9 1393 aa20.17■□□□□ 0.82
PRKCSH-208ENST00000589126 SETBP1Q9Y6X0 1596 aa20.17■□□□□ 0.82
PRKCSH-208ENST00000589126 HSPA1LP34931 641 aa20.15■□□□□ 0.82
PRKCSH-208ENST00000589126 PTPRUQ92729 1446 aa20.14■□□□□ 0.81
PRKCSH-208ENST00000589126 PIK3R4Q99570 1358 aa20.14■□□□□ 0.81
PRKCSH-208ENST00000589126 CCDC144AA2RUR9 1427 aa20.1■□□□□ 0.81
PRKCSH-208ENST00000589126 METP08581 1390 aa20.1■□□□□ 0.81
PRKCSH-208ENST00000589126 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
PRKCSH-208ENST00000589126 AMOTL2Q9Y2J4 779 aa20.09■□□□□ 0.81
PRKCSH-208ENST00000589126 PPLO60437 1756 aa20.08■□□□□ 0.81
PRKCSH-208ENST00000589126 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.81
PRKCSH-208ENST00000589126 XRN1Q8IZH2 1706 aaKnown RBP20.08■□□□□ 0.81
PRKCSH-208ENST00000589126 SPATA31E1Q6ZUB1 1445 aa20.08■□□□□ 0.8
PRKCSH-208ENST00000589126 MSH6P52701 1360 aa20.07■□□□□ 0.8
PRKCSH-208ENST00000589126 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
PRKCSH-208ENST00000589126 NCOA3Q9Y6Q9 1424 aa20.06■□□□□ 0.8
PRKCSH-208ENST00000589126 SETD1AO15047 1707 aaKnown RBP20.05■□□□□ 0.8
PRKCSH-208ENST00000589126 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
PRKCSH-208ENST00000589126 RGL3Q3MIN7 710 aa20.03■□□□□ 0.8
PRKCSH-208ENST00000589126 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
PRKCSH-208ENST00000589126 IFT172Q9UG01 1749 aa20.02■□□□□ 0.8
PRKCSH-208ENST00000589126 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.02■□□□□ 0.79
PRKCSH-208ENST00000589126 ROBO1Q9Y6N7 1651 aa20.01■□□□□ 0.79
PRKCSH-208ENST00000589126 HRCP23327 699 aa20.01■□□□□ 0.79
PRKCSH-208ENST00000589126 ADGRF5Q8IZF2 1346 aa20.01■□□□□ 0.79
PRKCSH-208ENST00000589126 C14orf37Q86TY3 774 aa20■□□□□ 0.79
PRKCSH-208ENST00000589126 SLAIN2Q9P270 581 aa20■□□□□ 0.79
PRKCSH-208ENST00000589126 C19orf44Q9H6X5 657 aa19.99■□□□□ 0.79
PRKCSH-208ENST00000589126 ANKRD30BQ9BXX2 1392 aa19.97■□□□□ 0.79
PRKCSH-208ENST00000589126 CADPS2Q86UW7 1296 aa19.95■□□□□ 0.78
PRKCSH-208ENST00000589126 MED1Q15648 1581 aaPredicted RBP19.95■□□□□ 0.78
PRKCSH-208ENST00000589126 ROBO2Q9HCK4 1378 aa19.94■□□□□ 0.78
PRKCSH-208ENST00000589126 PTCH1Q13635 1447 aa19.93■□□□□ 0.78
PRKCSH-208ENST00000589126 PRAG1Q86YV5 1406 aa19.93■□□□□ 0.78
PRKCSH-208ENST00000589126 ATF3P18847 181 aa19.93■□□□□ 0.78
PRKCSH-208ENST00000589126 PIK3C2GO75747 1445 aa19.93■□□□□ 0.78
PRKCSH-208ENST00000589126 NALCNQ8IZF0 1738 aa19.92■□□□□ 0.78
PRKCSH-208ENST00000589126 DCCP43146 1447 aa19.92■□□□□ 0.78
PRKCSH-208ENST00000589126 ADGRL3Q9HAR2 1447 aa19.92■□□□□ 0.78
PRKCSH-208ENST00000589126 ILDR2Q71H61 639 aa19.91■□□□□ 0.78
PRKCSH-208ENST00000589126 ASXL1Q8IXJ9 1541 aa19.91■□□□□ 0.78
PRKCSH-208ENST00000589126 NRXN1Q9ULB1 1477 aa19.9■□□□□ 0.78
PRKCSH-208ENST00000589126 MYOM2P54296 1465 aa19.88■□□□□ 0.77
PRKCSH-208ENST00000589126 MST1RQ04912 1400 aa19.88■□□□□ 0.77
PRKCSH-208ENST00000589126 PHLPP1O60346 1717 aa19.88■□□□□ 0.77
PRKCSH-208ENST00000589126 TMEM132EQ6IEE7 984 aa19.87■□□□□ 0.77
PRKCSH-208ENST00000589126 BRINP3Q76B58 766 aa19.86■□□□□ 0.77
PRKCSH-208ENST00000589126 COL16A1Q07092 1604 aaPredicted RBP19.85■□□□□ 0.77
PRKCSH-208ENST00000589126 TECPR2O15040 1411 aa19.85■□□□□ 0.77
PRKCSH-208ENST00000589126 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
PRKCSH-208ENST00000589126 C14orf93Q9H972 538 aaKnown RBP19.84■□□□□ 0.77
PRKCSH-208ENST00000589126 STK26Q9P289 416 aa19.84■□□□□ 0.77
PRKCSH-208ENST00000589126 AHDC1Q5TGY3 1603 aaPredicted RBP19.84■□□□□ 0.77
PRKCSH-208ENST00000589126 CFAP70Q5T0N1 1121 aa19.83■□□□□ 0.77
PRKCSH-208ENST00000589126 KNDC1Q76NI1 1749 aa19.82■□□□□ 0.76
PRKCSH-208ENST00000589126 ABCC11Q96J66 1382 aa19.82■□□□□ 0.76
PRKCSH-208ENST00000589126 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
PRKCSH-208ENST00000589126 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
PRKCSH-208ENST00000589126 DHX57Q6P158 1386 aaKnown RBP19.81■□□□□ 0.76
PRKCSH-208ENST00000589126 PLEKHH1Q9ULM0 1364 aa19.8■□□□□ 0.76
PRKCSH-208ENST00000589126 LAMC1P11047 1609 aa19.8■□□□□ 0.76
PRKCSH-208ENST00000589126 C1orf167Q5SNV9 1468 aa19.79■□□□□ 0.76
PRKCSH-208ENST00000589126 DCAF11Q8TEB1 546 aa19.79■□□□□ 0.76
PRKCSH-208ENST00000589126 KDM2AQ9Y2K7 1162 aa19.78■□□□□ 0.76
PRKCSH-208ENST00000589126 JCADQ9P266 1359 aa19.78■□□□□ 0.76
PRKCSH-208ENST00000589126 NHSL1Q5SYE7 1610 aa19.77■□□□□ 0.76
PRKCSH-208ENST00000589126 CDC42BPGQ6DT37 1551 aa19.76■□□□□ 0.75
PRKCSH-208ENST00000589126 DDX17Q92841 729 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms