RNA–Protein interactions for RNA: ENST00000589053.1

INO80C-208, Transcript of INO80 complex subunit C, human

Gene INO80C, Length 434 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
INO80C-208	ENST00000589053	MYO5B	Q9ULV0	1848 aa		33.46	■■■□□ 2.95
INO80C-208	ENST00000589053	RIMS2	Q9UQ26	1411 aa		33.45	■■■□□ 2.95
INO80C-208	ENST00000589053	KCNA6	P17658	529 aa		33.41	■■■□□ 2.94
INO80C-208	ENST00000589053	BCAN	Q96GW7	911 aa		33.41	■■■□□ 2.94
INO80C-208	ENST00000589053	HSPA1L	P34931	641 aa		33.39	■■■□□ 2.94
INO80C-208	ENST00000589053	HDGF	P51858	240 aa	Known RBP	33.39	■■■□□ 2.94
INO80C-208	ENST00000589053	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.39	■■■□□ 2.94
INO80C-208	ENST00000589053	PLEKHG1	Q9ULL1	1385 aa		33.38	■■■□□ 2.93
INO80C-208	ENST00000589053	PPP1R15A	O75807	674 aa	Predicted RBP	33.38	■■■□□ 2.93
INO80C-208	ENST00000589053	HFM1	A2PYH4	1435 aa		33.37	■■■□□ 2.93
INO80C-208	ENST00000589053	DISP3	Q9P2K9	1392 aa		33.34	■■■□□ 2.93
INO80C-208	ENST00000589053	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.34	■■■□□ 2.93
INO80C-208	ENST00000589053	RBM33	Q96EV2	1170 aa	Known RBP	33.32	■■■□□ 2.92
INO80C-208	ENST00000589053	XIRP1	Q702N8	1843 aa	Known RBP	33.32	■■■□□ 2.92
INO80C-208	ENST00000589053	TMEM94	Q12767	1356 aa		33.31	■■■□□ 2.92
INO80C-208	ENST00000589053	TRIM52	Q96A61	297 aa		33.3	■■■□□ 2.92
INO80C-208	ENST00000589053	PROSER2	Q86WR7	435 aa	Predicted RBP	33.29	■■■□□ 2.92
INO80C-208	ENST00000589053	SPHKAP	Q2M3C7	1700 aa		33.28	■■■□□ 2.92
INO80C-208	ENST00000589053	TBX22	Q9Y458	520 aa		33.28	■■■□□ 2.92
INO80C-208	ENST00000589053	ADAMTS13	Q76LX8	1427 aa		33.26	■■■□□ 2.91
INO80C-208	ENST00000589053	NWD1	Q149M9	1564 aa		33.25	■■■□□ 2.91
INO80C-208	ENST00000589053	NKTR	P30414	1462 aa	Known RBP	33.21	■■■□□ 2.91
INO80C-208	ENST00000589053	SLC4A1AP	Q9BWU0	796 aa	Known RBP	33.2	■■■□□ 2.91
INO80C-208	ENST00000589053	TRPM2	O94759	1503 aa		33.19	■■■□□ 2.9
INO80C-208	ENST00000589053	ZNF326	Q5BKZ1	582 aa	Known RBP	33.19	■■■□□ 2.9
INO80C-208	ENST00000589053	ILDR2	Q71H61	639 aa		33.19	■■■□□ 2.9
INO80C-208	ENST00000589053	CLTCL1	P53675	1640 aa		33.19	■■■□□ 2.9
INO80C-208	ENST00000589053	CHD2	O14647	1828 aa	Known RBP	33.17	■■■□□ 2.9
INO80C-208	ENST00000589053	FOXD1	Q16676	465 aa		33.11	■■■□□ 2.89
INO80C-208	ENST00000589053	DIP2A	Q14689	1571 aa		33.11	■■■□□ 2.89
INO80C-208	ENST00000589053	PIK3R4	Q99570	1358 aa		33.1	■■■□□ 2.89
INO80C-208	ENST00000589053	FAM135B	Q49AJ0	1406 aa		33.09	■■■□□ 2.89
INO80C-208	ENST00000589053	PTPRU	Q92729	1446 aa		33.09	■■■□□ 2.89
INO80C-208	ENST00000589053	AMOTL2	Q9Y2J4	779 aa		33.07	■■■□□ 2.88
INO80C-208	ENST00000589053	MSH6	P52701	1360 aa		33.07	■■■□□ 2.88
INO80C-208	ENST00000589053	NRXN3	Q9Y4C0	1643 aa		33.06	■■■□□ 2.88
INO80C-208	ENST00000589053	NEXMIF	Q5QGS0	1516 aa		33.06	■■■□□ 2.88
INO80C-208	ENST00000589053	SETBP1	Q9Y6X0	1596 aa		33.04	■■■□□ 2.88
INO80C-208	ENST00000589053	MPHOSPH9	Q99550	1183 aa		33.02	■■■□□ 2.88
INO80C-208	ENST00000589053	MET	P08581	1390 aa		33.01	■■■□□ 2.88
INO80C-208	ENST00000589053	KIF1B	O60333	1816 aa		33.01	■■■□□ 2.87
INO80C-208	ENST00000589053	SLAIN2	Q9P270	581 aa		33.01	■■■□□ 2.87
INO80C-208	ENST00000589053	NCOA3	Q9Y6Q9	1424 aa		33.01	■■■□□ 2.87
INO80C-208	ENST00000589053	MED1	Q15648	1581 aa	Predicted RBP	33	■■■□□ 2.87
INO80C-208	ENST00000589053	C14orf37	Q86TY3	774 aa		32.97	■■■□□ 2.87
INO80C-208	ENST00000589053	ROBO1	Q9Y6N7	1651 aa		32.96	■■■□□ 2.87
INO80C-208	ENST00000589053	SETD5	Q9C0A6	1442 aa		32.94	■■■□□ 2.86
INO80C-208	ENST00000589053	C19orf44	Q9H6X5	657 aa		32.94	■■■□□ 2.86
INO80C-208	ENST00000589053	VGF	O15240	615 aa	Predicted RBP	32.93	■■■□□ 2.86
INO80C-208	ENST00000589053	RPGRIP1L	Q68CZ1	1315 aa		32.92	■■■□□ 2.86
INO80C-208	ENST00000589053	XRN1	Q8IZH2	1706 aa	Known RBP	32.91	■■■□□ 2.86
INO80C-208	ENST00000589053	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.88	■■■□□ 2.85
INO80C-208	ENST00000589053	CCDC144A	A2RUR9	1427 aa		32.87	■■■□□ 2.85
INO80C-208	ENST00000589053	CADPS2	Q86UW7	1296 aa		32.87	■■■□□ 2.85
INO80C-208	ENST00000589053	ATF3	P18847	181 aa		32.86	■■■□□ 2.85
INO80C-208	ENST00000589053	RAB3GAP2	Q9H2M9	1393 aa		32.84	■■■□□ 2.85
INO80C-208	ENST00000589053	RGL3	Q3MIN7	710 aa		32.84	■■■□□ 2.85
INO80C-208	ENST00000589053	SPATA31E1	Q6ZUB1	1445 aa		32.83	■■■□□ 2.85
INO80C-208	ENST00000589053	SOCS7	O14512	581 aa		32.82	■■■□□ 2.84
INO80C-208	ENST00000589053	PPL	O60437	1756 aa		32.81	■■■□□ 2.84
INO80C-208	ENST00000589053	ACIN1	Q9UKV3	1341 aa	Known RBP	32.8	■■■□□ 2.84
INO80C-208	ENST00000589053	ADGRF5	Q8IZF2	1346 aa		32.79	■■■□□ 2.84
INO80C-208	ENST00000589053	SETD1A	O15047	1707 aa	Known RBP	32.78	■■■□□ 2.84
INO80C-208	ENST00000589053	PHF23	Q9BUL5	403 aa	Predicted RBP	32.78	■■■□□ 2.84
INO80C-208	ENST00000589053	DCC	P43146	1447 aa		32.75	■■■□□ 2.83
INO80C-208	ENST00000589053	PHLPP1	O60346	1717 aa		32.74	■■■□□ 2.83
INO80C-208	ENST00000589053	ROBO2	Q9HCK4	1378 aa		32.73	■■■□□ 2.83
INO80C-208	ENST00000589053	BRINP3	Q76B58	766 aa		32.73	■■■□□ 2.83
INO80C-208	ENST00000589053	ADGRL3	Q9HAR2	1447 aa		32.71	■■■□□ 2.83
INO80C-208	ENST00000589053	RGS17	Q9UGC6	210 aa	Predicted RBP	32.71	■■■□□ 2.83
INO80C-208	ENST00000589053	MST1R	Q04912	1400 aa		32.7	■■■□□ 2.83
INO80C-208	ENST00000589053	PTCH1	Q13635	1447 aa		32.69	■■■□□ 2.82
INO80C-208	ENST00000589053	ANKRD30B	Q9BXX2	1392 aa		32.69	■■■□□ 2.82
INO80C-208	ENST00000589053	COL16A1	Q07092	1604 aa	Predicted RBP	32.68	■■■□□ 2.82
INO80C-208	ENST00000589053	JCAD	Q9P266	1359 aa		32.67	■■■□□ 2.82
INO80C-208	ENST00000589053	PRAG1	Q86YV5	1406 aa		32.66	■■■□□ 2.82
INO80C-208	ENST00000589053	NALCN	Q8IZF0	1738 aa		32.65	■■■□□ 2.82
INO80C-208	ENST00000589053	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.64	■■■□□ 2.82
INO80C-208	ENST00000589053	IFT172	Q9UG01	1749 aa		32.64	■■■□□ 2.82
INO80C-208	ENST00000589053	ASXL1	Q8IXJ9	1541 aa		32.61	■■■□□ 2.81
INO80C-208	ENST00000589053	PIK3C2G	O75747	1445 aa		32.6	■■■□□ 2.81
INO80C-208	ENST00000589053	HRC	P23327	699 aa		32.6	■■■□□ 2.81
INO80C-208	ENST00000589053	TMEM132E	Q6IEE7	984 aa		32.6	■■■□□ 2.81
INO80C-208	ENST00000589053	STK26	Q9P289	416 aa		32.59	■■■□□ 2.81
INO80C-208	ENST00000589053	DDX17	Q92841	729 aa	Known RBP	32.57	■■■□□ 2.8
INO80C-208	ENST00000589053	C1orf167	Q5SNV9	1468 aa		32.54	■■■□□ 2.8
INO80C-208	ENST00000589053	LRPPRC	P42704	1394 aa	Known RBP	32.54	■■■□□ 2.8
INO80C-208	ENST00000589053	WAPL	Q7Z5K2	1190 aa		32.53	■■■□□ 2.8
INO80C-208	ENST00000589053	C14orf93	Q9H972	538 aa	Known RBP	32.52	■■■□□ 2.8
INO80C-208	ENST00000589053	NRXN1	Q9ULB1	1477 aa		32.51	■■■□□ 2.79
INO80C-208	ENST00000589053	ABCC11	Q96J66	1382 aa		32.51	■■■□□ 2.79
INO80C-208	ENST00000589053	POTEA	Q6S8J7	498 aa		32.51	■■■□□ 2.79
INO80C-208	ENST00000589053	ORAI2	Q96SN7	254 aa		32.51	■■■□□ 2.79
INO80C-208	ENST00000589053	TECPR2	O15040	1411 aa		32.51	■■■□□ 2.79
INO80C-208	ENST00000589053	SPATA31A6	Q5VVP1	1343 aa		32.51	■■■□□ 2.79
INO80C-208	ENST00000589053	CFAP70	Q5T0N1	1121 aa		32.5	■■■□□ 2.79
INO80C-208	ENST00000589053	LRP6	O75581	1613 aa		32.49	■■■□□ 2.79
INO80C-208	ENST00000589053	MYOM2	P54296	1465 aa		32.48	■■■□□ 2.79
INO80C-208	ENST00000589053	NHSL1	Q5SYE7	1610 aa		32.48	■■■□□ 2.79
INO80C-208	ENST00000589053	PLEKHH1	Q9ULM0	1364 aa		32.47	■■■□□ 2.79

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms