RNA–Protein interactions for RNA: ENST00000588306.1

RDH13-210, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 442 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-210ENST00000588306 PPARGC1BQ86YN6 1023 aaKnown RBP18.37■□□□□ 0.53
RDH13-210ENST00000588306 XIRP1Q702N8 1843 aaKnown RBP18.37■□□□□ 0.53
RDH13-210ENST00000588306 NKTRP30414 1462 aaKnown RBP18.36■□□□□ 0.53
RDH13-210ENST00000588306 NWD1Q149M9 1564 aa18.36■□□□□ 0.53
RDH13-210ENST00000588306 PLEKHG1Q9ULL1 1385 aa18.36■□□□□ 0.53
RDH13-210ENST00000588306 RIMS2Q9UQ26 1411 aa18.36■□□□□ 0.53
RDH13-210ENST00000588306 PPP1R15AO75807 674 aaPredicted RBP18.35■□□□□ 0.53
RDH13-210ENST00000588306 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.35■□□□□ 0.53
RDH13-210ENST00000588306 SLC26A8Q96RN1 970 aa18.35■□□□□ 0.53
RDH13-210ENST00000588306 BCANQ96GW7 911 aa18.34■□□□□ 0.53
RDH13-210ENST00000588306 ILDR2Q71H61 639 aa18.33■□□□□ 0.52
RDH13-210ENST00000588306 TMEM94Q12767 1356 aa18.32■□□□□ 0.52
RDH13-210ENST00000588306 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
RDH13-210ENST00000588306 MED1Q15648 1581 aaPredicted RBP18.3■□□□□ 0.52
RDH13-210ENST00000588306 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
RDH13-210ENST00000588306 DIP2AQ14689 1571 aa18.3■□□□□ 0.52
RDH13-210ENST00000588306 CHD2O14647 1828 aaKnown RBP18.29■□□□□ 0.52
RDH13-210ENST00000588306 PROSER2Q86WR7 435 aaPredicted RBP18.29■□□□□ 0.52
RDH13-210ENST00000588306 SOCS7O14512 581 aa18.28■□□□□ 0.52
RDH13-210ENST00000588306 TBX22Q9Y458 520 aa18.28■□□□□ 0.52
RDH13-210ENST00000588306 NAIPQ13075 1403 aa18.27■□□□□ 0.52
RDH13-210ENST00000588306 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
RDH13-210ENST00000588306 MSH6P52701 1360 aa18.26■□□□□ 0.51
RDH13-210ENST00000588306 PIK3R4Q99570 1358 aa18.26■□□□□ 0.51
RDH13-210ENST00000588306 NCOA3Q9Y6Q9 1424 aa18.24■□□□□ 0.51
RDH13-210ENST00000588306 HFM1A2PYH4 1435 aa18.23■□□□□ 0.51
RDH13-210ENST00000588306 ADAMTS13Q76LX8 1427 aa18.23■□□□□ 0.51
RDH13-210ENST00000588306 TRPM2O94759 1503 aa18.22■□□□□ 0.51
RDH13-210ENST00000588306 ROBO1Q9Y6N7 1651 aa18.21■□□□□ 0.51
RDH13-210ENST00000588306 NUTM2DQ5VT03 806 aaPredicted RBP18.19■□□□□ 0.5
RDH13-210ENST00000588306 RBM33Q96EV2 1170 aaKnown RBP18.19■□□□□ 0.5
RDH13-210ENST00000588306 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
RDH13-210ENST00000588306 SENP3Q9H4L4 574 aaPredicted RBP18.19■□□□□ 0.5
RDH13-210ENST00000588306 SETBP1Q9Y6X0 1596 aa18.19■□□□□ 0.5
RDH13-210ENST00000588306 KIF1BO60333 1816 aa18.18■□□□□ 0.5
RDH13-210ENST00000588306 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
RDH13-210ENST00000588306 ZNF326Q5BKZ1 582 aaKnown RBP18.17■□□□□ 0.5
RDH13-210ENST00000588306 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
RDH13-210ENST00000588306 SLAIN2Q9P270 581 aa18.15■□□□□ 0.5
RDH13-210ENST00000588306 C14orf37Q86TY3 774 aa18.14■□□□□ 0.49
RDH13-210ENST00000588306 CADPS2Q86UW7 1296 aa18.14■□□□□ 0.49
RDH13-210ENST00000588306 TRIM52Q96A61 297 aa18.14■□□□□ 0.49
RDH13-210ENST00000588306 NEXMIFQ5QGS0 1516 aa18.13■□□□□ 0.49
RDH13-210ENST00000588306 C19orf44Q9H6X5 657 aa18.13■□□□□ 0.49
RDH13-210ENST00000588306 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
RDH13-210ENST00000588306 XRN1Q8IZH2 1706 aaKnown RBP18.12■□□□□ 0.49
RDH13-210ENST00000588306 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
RDH13-210ENST00000588306 SLC4A1APQ9BWU0 796 aaKnown RBP18.11■□□□□ 0.49
RDH13-210ENST00000588306 PTPRUQ92729 1446 aa18.11■□□□□ 0.49
RDH13-210ENST00000588306 PHLPP1O60346 1717 aa18.1■□□□□ 0.49
RDH13-210ENST00000588306 DCCP43146 1447 aa18.1■□□□□ 0.49
RDH13-210ENST00000588306 ATF3P18847 181 aa18.1■□□□□ 0.49
RDH13-210ENST00000588306 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.49
RDH13-210ENST00000588306 ACIN1Q9UKV3 1341 aaKnown RBP18.08■□□□□ 0.49
RDH13-210ENST00000588306 VGFO15240 615 aaPredicted RBP18.07■□□□□ 0.48
RDH13-210ENST00000588306 METP08581 1390 aa18.06■□□□□ 0.48
RDH13-210ENST00000588306 JCADQ9P266 1359 aa18.05■□□□□ 0.48
RDH13-210ENST00000588306 COL16A1Q07092 1604 aaPredicted RBP18.04■□□□□ 0.48
RDH13-210ENST00000588306 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
RDH13-210ENST00000588306 PPLO60437 1756 aa18.02■□□□□ 0.48
RDH13-210ENST00000588306 CCDC144AA2RUR9 1427 aa18.01■□□□□ 0.47
RDH13-210ENST00000588306 SETD1AO15047 1707 aaKnown RBP18.01■□□□□ 0.47
RDH13-210ENST00000588306 PTCH1Q13635 1447 aa18■□□□□ 0.47
RDH13-210ENST00000588306 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
RDH13-210ENST00000588306 ADGRL3Q9HAR2 1447 aa18■□□□□ 0.47
RDH13-210ENST00000588306 RGS17Q9UGC6 210 aaPredicted RBP17.99■□□□□ 0.47
RDH13-210ENST00000588306 SPATA31A6Q5VVP1 1343 aa17.98■□□□□ 0.47
RDH13-210ENST00000588306 BRINP3Q76B58 766 aa17.98■□□□□ 0.47
RDH13-210ENST00000588306 MPHOSPH9Q99550 1183 aa17.98■□□□□ 0.47
RDH13-210ENST00000588306 ASXL1Q8IXJ9 1541 aa17.98■□□□□ 0.47
RDH13-210ENST00000588306 MST1RQ04912 1400 aa17.98■□□□□ 0.47
RDH13-210ENST00000588306 SHPRHQ149N8 1683 aa17.97■□□□□ 0.47
RDH13-210ENST00000588306 NALCNQ8IZF0 1738 aa17.97■□□□□ 0.47
RDH13-210ENST00000588306 ANKRD30BQ9BXX2 1392 aa17.95■□□□□ 0.46
RDH13-210ENST00000588306 FOXD1Q16676 465 aa17.95■□□□□ 0.46
RDH13-210ENST00000588306 SPATA31E1Q6ZUB1 1445 aa17.94■□□□□ 0.46
RDH13-210ENST00000588306 SETD5Q9C0A6 1442 aa17.94■□□□□ 0.46
RDH13-210ENST00000588306 NHSL1Q5SYE7 1610 aa17.94■□□□□ 0.46
RDH13-210ENST00000588306 IFT172Q9UG01 1749 aa17.92■□□□□ 0.46
RDH13-210ENST00000588306 ROBO2Q9HCK4 1378 aa17.91■□□□□ 0.46
RDH13-210ENST00000588306 C1orf167Q5SNV9 1468 aa17.89■□□□□ 0.45
RDH13-210ENST00000588306 MEX3CQ5U5Q3 659 aaKnown RBP17.89■□□□□ 0.45
RDH13-210ENST00000588306 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
RDH13-210ENST00000588306 LRP6O75581 1613 aa17.89■□□□□ 0.45
RDH13-210ENST00000588306 RGL3Q3MIN7 710 aa17.88■□□□□ 0.45
RDH13-210ENST00000588306 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
RDH13-210ENST00000588306 ADGRF5Q8IZF2 1346 aa17.88■□□□□ 0.45
RDH13-210ENST00000588306 TECPR2O15040 1411 aa17.87■□□□□ 0.45
RDH13-210ENST00000588306 LAMC1P11047 1609 aa17.87■□□□□ 0.45
RDH13-210ENST00000588306 ZNF772Q68DY9 489 aaPredicted RBP17.86■□□□□ 0.45
RDH13-210ENST00000588306 PIK3C2GO75747 1445 aa17.86■□□□□ 0.45
RDH13-210ENST00000588306 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
RDH13-210ENST00000588306 KNDC1Q76NI1 1749 aa17.85■□□□□ 0.45
RDH13-210ENST00000588306 RAB3GAP2Q9H2M9 1393 aa17.85■□□□□ 0.45
RDH13-210ENST00000588306 LRPPRCP42704 1394 aaKnown RBP17.84■□□□□ 0.45
RDH13-210ENST00000588306 ABCC11Q96J66 1382 aa17.83■□□□□ 0.45
RDH13-210ENST00000588306 MYOM2P54296 1465 aa17.82■□□□□ 0.44
RDH13-210ENST00000588306 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
RDH13-210ENST00000588306 NRXN1Q9ULB1 1477 aa17.8■□□□□ 0.44
RDH13-210ENST00000588306 SOS2Q07890 1332 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms