RNA–Protein interactions for RNA: ENST00000588275.2

LINC01842-201, Transcript of long intergenic non-protein coding RNA 1842, humanhuman

TSL 1 (best) BASIC

Gene LINC01842, Length 768 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01842-201ENST00000588275 PROSER2Q86WR7 435 aaPredicted RBP25.89■■□□□ 1.74
LINC01842-201ENST00000588275 UNC13BO14795 1591 aa25.89■■□□□ 1.73
LINC01842-201ENST00000588275 PPP1R15AO75807 674 aaPredicted RBP25.87■■□□□ 1.73
LINC01842-201ENST00000588275 CHGAP10645 457 aaKnown RBP25.86■■□□□ 1.73
LINC01842-201ENST00000588275 RIMS2Q9UQ26 1411 aa25.85■■□□□ 1.73
LINC01842-201ENST00000588275 NWD1Q149M9 1564 aa25.85■■□□□ 1.73
LINC01842-201ENST00000588275 ITGAEP38570 1179 aa25.84■■□□□ 1.73
LINC01842-201ENST00000588275 NKTRP30414 1462 aaKnown RBP25.84■■□□□ 1.73
LINC01842-201ENST00000588275 ZFYVE9O95405 1425 aa25.83■■□□□ 1.73
LINC01842-201ENST00000588275 TMEM131LA2VDJ0 1609 aa25.83■■□□□ 1.73
LINC01842-201ENST00000588275 E9PCH4 1651 aa25.83■■□□□ 1.73
LINC01842-201ENST00000588275 FAM135BQ49AJ0 1406 aa25.81■■□□□ 1.72
LINC01842-201ENST00000588275 ROBO1Q9Y6N7 1651 aa25.81■■□□□ 1.72
LINC01842-201ENST00000588275 PLEKHG1Q9ULL1 1385 aa25.81■■□□□ 1.72
LINC01842-201ENST00000588275 PPARGC1BQ86YN6 1023 aaKnown RBP25.8■■□□□ 1.72
LINC01842-201ENST00000588275 ROCK1Q13464 1354 aa25.8■■□□□ 1.72
LINC01842-201ENST00000588275 IQGAP3Q86VI3 1631 aa25.79■■□□□ 1.72
LINC01842-201ENST00000588275 HDGFP51858 240 aaKnown RBP25.79■■□□□ 1.72
LINC01842-201ENST00000588275 MSH6P52701 1360 aa25.78■■□□□ 1.72
LINC01842-201ENST00000588275 NUTM2DQ5VT03 806 aaPredicted RBP25.77■■□□□ 1.72
LINC01842-201ENST00000588275 CHD2O14647 1828 aaKnown RBP25.76■■□□□ 1.71
LINC01842-201ENST00000588275 NUP155O75694 1391 aa25.75■■□□□ 1.71
LINC01842-201ENST00000588275 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.73■■□□□ 1.71
LINC01842-201ENST00000588275 C14orf37Q86TY3 774 aa25.7■■□□□ 1.7
LINC01842-201ENST00000588275 TBX22Q9Y458 520 aa25.68■■□□□ 1.7
LINC01842-201ENST00000588275 PHLPP1O60346 1717 aa25.67■■□□□ 1.7
LINC01842-201ENST00000588275 ADAMTS13Q76LX8 1427 aa25.67■■□□□ 1.7
LINC01842-201ENST00000588275 SLAIN2Q9P270 581 aa25.67■■□□□ 1.7
LINC01842-201ENST00000588275 RGS17Q9UGC6 210 aaPredicted RBP25.67■■□□□ 1.7
LINC01842-201ENST00000588275 DIP2AQ14689 1571 aa25.66■■□□□ 1.7
LINC01842-201ENST00000588275 SPHKAPQ2M3C7 1700 aa25.63■■□□□ 1.69
LINC01842-201ENST00000588275 TRPM2O94759 1503 aa25.62■■□□□ 1.69
LINC01842-201ENST00000588275 PIK3R4Q99570 1358 aa25.58■■□□□ 1.69
LINC01842-201ENST00000588275 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.58■■□□□ 1.69
LINC01842-201ENST00000588275 NCOA3Q9Y6Q9 1424 aa25.58■■□□□ 1.69
LINC01842-201ENST00000588275 ZNF326Q5BKZ1 582 aaKnown RBP25.58■■□□□ 1.69
LINC01842-201ENST00000588275 JCADQ9P266 1359 aa25.56■■□□□ 1.68
LINC01842-201ENST00000588275 ATF3P18847 181 aa25.56■■□□□ 1.68
LINC01842-201ENST00000588275 AMOTL2Q9Y2J4 779 aa25.56■■□□□ 1.68
LINC01842-201ENST00000588275 POTEAQ6S8J7 498 aa25.55■■□□□ 1.68
LINC01842-201ENST00000588275 COL16A1Q07092 1604 aaPredicted RBP25.55■■□□□ 1.68
LINC01842-201ENST00000588275 PTPRUQ92729 1446 aa25.54■■□□□ 1.68
LINC01842-201ENST00000588275 CADPS2Q86UW7 1296 aa25.54■■□□□ 1.68
LINC01842-201ENST00000588275 NRXN3Q9Y4C0 1643 aa25.53■■□□□ 1.68
LINC01842-201ENST00000588275 C19orf44Q9H6X5 657 aa25.53■■□□□ 1.68
LINC01842-201ENST00000588275 CLTCL1P53675 1640 aa25.5■■□□□ 1.67
LINC01842-201ENST00000588275 SETBP1Q9Y6X0 1596 aa25.5■■□□□ 1.67
LINC01842-201ENST00000588275 XRN1Q8IZH2 1706 aaKnown RBP25.49■■□□□ 1.67
LINC01842-201ENST00000588275 RRBP1Q9P2E9 1410 aaKnown RBP25.48■■□□□ 1.67
LINC01842-201ENST00000588275 AHDC1Q5TGY3 1603 aaPredicted RBP25.47■■□□□ 1.67
LINC01842-201ENST00000588275 NAIPQ13075 1403 aa25.46■■□□□ 1.67
LINC01842-201ENST00000588275 KIF1BO60333 1816 aa25.45■■□□□ 1.66
LINC01842-201ENST00000588275 MEX3CQ5U5Q3 659 aaKnown RBP25.45■■□□□ 1.66
LINC01842-201ENST00000588275 NEXMIFQ5QGS0 1516 aa25.44■■□□□ 1.66
LINC01842-201ENST00000588275 LRP6O75581 1613 aa25.44■■□□□ 1.66
LINC01842-201ENST00000588275 METP08581 1390 aa25.44■■□□□ 1.66
LINC01842-201ENST00000588275 SETD1AO15047 1707 aaKnown RBP25.43■■□□□ 1.66
LINC01842-201ENST00000588275 BRINP3Q76B58 766 aa25.42■■□□□ 1.66
LINC01842-201ENST00000588275 TRIM52Q96A61 297 aa25.42■■□□□ 1.66
LINC01842-201ENST00000588275 DCCP43146 1447 aa25.42■■□□□ 1.66
LINC01842-201ENST00000588275 SHPRHQ149N8 1683 aa25.42■■□□□ 1.66
LINC01842-201ENST00000588275 SPATA31A6Q5VVP1 1343 aa25.41■■□□□ 1.66
LINC01842-201ENST00000588275 ASXL1Q8IXJ9 1541 aa25.38■■□□□ 1.65
LINC01842-201ENST00000588275 MST1RQ04912 1400 aa25.37■■□□□ 1.65
LINC01842-201ENST00000588275 NALCNQ8IZF0 1738 aa25.35■■□□□ 1.65
LINC01842-201ENST00000588275 NUTM2BA6NNL0 878 aaPredicted RBP25.35■■□□□ 1.65
LINC01842-201ENST00000588275 NUTM2EB1AL46 878 aaPredicted RBP25.35■■□□□ 1.65
LINC01842-201ENST00000588275 NUTM2AQ8IVF1 878 aaPredicted RBP25.35■■□□□ 1.65
LINC01842-201ENST00000588275 ADGRL3Q9HAR2 1447 aa25.35■■□□□ 1.65
LINC01842-201ENST00000588275 HFM1A2PYH4 1435 aa25.33■■□□□ 1.65
LINC01842-201ENST00000588275 NHSL1Q5SYE7 1610 aa25.33■■□□□ 1.65
LINC01842-201ENST00000588275 SLC4A1APQ9BWU0 796 aaKnown RBP25.32■■□□□ 1.64
LINC01842-201ENST00000588275 ZNF772Q68DY9 489 aaPredicted RBP25.31■■□□□ 1.64
LINC01842-201ENST00000588275 VGFO15240 615 aaPredicted RBP25.28■■□□□ 1.64
LINC01842-201ENST00000588275 DDX17Q92841 729 aaKnown RBP25.28■■□□□ 1.64
LINC01842-201ENST00000588275 SETD5Q9C0A6 1442 aa25.27■■□□□ 1.64
LINC01842-201ENST00000588275 PTCH1Q13635 1447 aa25.25■■□□□ 1.63
LINC01842-201ENST00000588275 PPLO60437 1756 aa25.24■■□□□ 1.63
LINC01842-201ENST00000588275 LRRC59Q96AG4 307 aaKnown RBP25.24■■□□□ 1.63
LINC01842-201ENST00000588275 ROBO2Q9HCK4 1378 aa25.23■■□□□ 1.63
LINC01842-201ENST00000588275 FOXD1Q16676 465 aa25.23■■□□□ 1.63
LINC01842-201ENST00000588275 RPGRIP1LQ68CZ1 1315 aa25.22■■□□□ 1.63
LINC01842-201ENST00000588275 C1orf167Q5SNV9 1468 aa25.21■■□□□ 1.63
LINC01842-201ENST00000588275 AFF2P51816 1311 aa25.21■■□□□ 1.63
LINC01842-201ENST00000588275 PNPLA6Q8IY17 1366 aa25.19■■□□□ 1.62
LINC01842-201ENST00000588275 RXRBP28702 533 aa25.19■■□□□ 1.62
LINC01842-201ENST00000588275 C8orf37Q96NL8 207 aa25.18■■□□□ 1.62
LINC01842-201ENST00000588275 ORAI2Q96SN7 254 aa25.16■■□□□ 1.62
LINC01842-201ENST00000588275 CCDC144AA2RUR9 1427 aa25.15■■□□□ 1.62
LINC01842-201ENST00000588275 RGL3Q3MIN7 710 aa25.14■■□□□ 1.62
LINC01842-201ENST00000588275 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
LINC01842-201ENST00000588275 ADAMTS2O95450 1211 aa25.12■■□□□ 1.61
LINC01842-201ENST00000588275 UPF1Q92900 1129 aaKnown RBP eCLIP25.11■■□□□ 1.61
LINC01842-201ENST00000588275 LAMC1P11047 1609 aa25.11■■□□□ 1.61
LINC01842-201ENST00000588275 ADGRF5Q8IZF2 1346 aa25.11■■□□□ 1.61
LINC01842-201ENST00000588275 STK26Q9P289 416 aa25.09■■□□□ 1.61
LINC01842-201ENST00000588275 CDK12Q9NYV4 1490 aaPredicted RBP25.09■■□□□ 1.61
LINC01842-201ENST00000588275 NGLY1Q96IV0 654 aa25.08■■□□□ 1.61
LINC01842-201ENST00000588275 SOS2Q07890 1332 aaPredicted RBP25.08■■□□□ 1.6
LINC01842-201ENST00000588275 IFT172Q9UG01 1749 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms