RNA–Protein interactions for RNA: ENST00000588254.1

SSC5D-203, Transcript of scavenger receptor cysteine rich family member with 5 domains, humanhuman

TSL 2

Gene SSC5D, Length 3,085 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5D-203ENST00000588254 CENPJQ9HC77 1338 aaPredicted RBP21.57■■□□□ 1.04
SSC5D-203ENST00000588254 RSPH6AQ9H0K4 717 aa21.54■■□□□ 1.04
SSC5D-203ENST00000588254 UPF2Q9HAU5 1272 aaKnown RBP21.54■■□□□ 1.04
SSC5D-203ENST00000588254 PLA2R1Q13018 1463 aa21.54■■□□□ 1.04
SSC5D-203ENST00000588254 TRPM1Q7Z4N2 1603 aa21.53■■□□□ 1.04
SSC5D-203ENST00000588254 RLBP1P12271 317 aa21.53■■□□□ 1.04
SSC5D-203ENST00000588254 MFAP1P55081 439 aaKnown RBP21.53■■□□□ 1.04
SSC5D-203ENST00000588254 TBC1D2Q9BYX2 928 aa21.53■■□□□ 1.04
SSC5D-203ENST00000588254 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
SSC5D-203ENST00000588254 PCDHB15Q9Y5E8 787 aa21.53■■□□□ 1.04
SSC5D-203ENST00000588254 CROCC2H7BZ55 1655 aa21.53■■□□□ 1.04
SSC5D-203ENST00000588254 MAGI1Q96QZ7 1491 aaPredicted RBP21.51■■□□□ 1.03
SSC5D-203ENST00000588254 E9PSI1 815 aa21.5■■□□□ 1.03
SSC5D-203ENST00000588254 PDZRN3Q9UPQ7 1066 aa21.5■■□□□ 1.03
SSC5D-203ENST00000588254 PLEKHH2Q8IVE3 1493 aa21.5■■□□□ 1.03
SSC5D-203ENST00000588254 NKTRP30414 1462 aaKnown RBP21.5■■□□□ 1.03
SSC5D-203ENST00000588254 CDC42BPAQ5VT25 1732 aa21.5■■□□□ 1.03
SSC5D-203ENST00000588254 XRCC6P12956 609 aaKnown RBP eCLIP21.48■■□□□ 1.03
SSC5D-203ENST00000588254 ATP10BO94823 1461 aa21.47■■□□□ 1.03
SSC5D-203ENST00000588254 FOXD4L1Q9NU39 408 aa21.47■■□□□ 1.03
SSC5D-203ENST00000588254 WDR7Q9Y4E6 1490 aa21.46■■□□□ 1.03
SSC5D-203ENST00000588254 CGNL1Q0VF96 1302 aa21.46■■□□□ 1.03
SSC5D-203ENST00000588254 GOLGA6L3A6NEY3 463 aa21.46■■□□□ 1.03
SSC5D-203ENST00000588254 CARMIL2Q6F5E8 1435 aa21.46■■□□□ 1.03
SSC5D-203ENST00000588254 EIF3AQ14152 1382 aaKnown RBP21.46■■□□□ 1.03
SSC5D-203ENST00000588254 GPRASP1Q5JY77 1395 aa21.46■■□□□ 1.03
SSC5D-203ENST00000588254 WWC1Q8IX03 1113 aa21.46■■□□□ 1.03
SSC5D-203ENST00000588254 PTPRGP23470 1445 aa21.45■■□□□ 1.02
SSC5D-203ENST00000588254 MAPK8IP3Q9UPT6 1336 aa21.44■■□□□ 1.02
SSC5D-203ENST00000588254 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
SSC5D-203ENST00000588254 L1TD1Q5T7N2 865 aaKnown RBP21.42■■□□□ 1.02
SSC5D-203ENST00000588254 PNNQ9H307 717 aaKnown RBP21.42■■□□□ 1.02
SSC5D-203ENST00000588254 ANTXR1Q9H6X2 564 aa21.42■■□□□ 1.02
SSC5D-203ENST00000588254 TRMT2AQ8IZ69 625 aaKnown RBP21.42■■□□□ 1.02
SSC5D-203ENST00000588254 CARD14Q9BXL6 1004 aa21.42■■□□□ 1.02
SSC5D-203ENST00000588254 ADCY10Q96PN6 1610 aa21.41■■□□□ 1.02
SSC5D-203ENST00000588254 ABCC10Q5T3U5 1492 aa21.41■■□□□ 1.02
SSC5D-203ENST00000588254 CHGAP10645 457 aaKnown RBP21.41■■□□□ 1.02
SSC5D-203ENST00000588254 PRDM15P57071 1507 aaPredicted RBP21.41■■□□□ 1.02
SSC5D-203ENST00000588254 CCDC141Q6ZP82 1450 aa21.4■■□□□ 1.02
SSC5D-203ENST00000588254 TBC1D32Q96NH3 1257 aa21.4■■□□□ 1.02
SSC5D-203ENST00000588254 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
SSC5D-203ENST00000588254 MCM4P33991 863 aa21.39■■□□□ 1.01
SSC5D-203ENST00000588254 TCP11L2Q8N4U5 519 aa21.39■■□□□ 1.01
SSC5D-203ENST00000588254 RARSP54136 660 aaKnown RBP21.38■■□□□ 1.01
SSC5D-203ENST00000588254 PDE3AQ14432 1141 aa21.38■■□□□ 1.01
SSC5D-203ENST00000588254 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
SSC5D-203ENST00000588254 SHANK2Q9UPX8 1470 aa21.38■■□□□ 1.01
SSC5D-203ENST00000588254 FTSJ3Q8IY81 847 aaKnown RBP21.38■■□□□ 1.01
SSC5D-203ENST00000588254 TSR2Q969E8 191 aaKnown RBP21.38■■□□□ 1.01
SSC5D-203ENST00000588254 SYCP2Q9BX26 1530 aa21.38■■□□□ 1.01
SSC5D-203ENST00000588254 CDCA8Q53HL2 280 aa21.37■■□□□ 1.01
SSC5D-203ENST00000588254 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
SSC5D-203ENST00000588254 TRAK2O60296 914 aa21.37■■□□□ 1.01
SSC5D-203ENST00000588254 MORC1Q86VD1 984 aa21.36■■□□□ 1.01
SSC5D-203ENST00000588254 C22orf23Q9BZE7 217 aa21.35■■□□□ 1.01
SSC5D-203ENST00000588254 PMFBP1Q8TBY8 1022 aa21.34■■□□□ 1.01
SSC5D-203ENST00000588254 ARHGAP5Q13017 1502 aa21.33■■□□□ 1.01
SSC5D-203ENST00000588254 ASXL1Q8IXJ9 1541 aa21.33■■□□□ 1.01
SSC5D-203ENST00000588254 SLC12A5Q9H2X9 1139 aa21.32■■□□□ 1
SSC5D-203ENST00000588254 ITPRIPQ8IWB1 547 aa21.32■■□□□ 1
SSC5D-203ENST00000588254 TRAK1Q9UPV9 953 aa21.32■■□□□ 1
SSC5D-203ENST00000588254 NLRP1Q9C000 1473 aa21.31■■□□□ 1
SSC5D-203ENST00000588254 SAMD9LQ8IVG5 1584 aa21.31■■□□□ 1
SSC5D-203ENST00000588254 RWDD1Q9H446 243 aaPredicted RBP21.31■■□□□ 1
SSC5D-203ENST00000588254 INSRP06213 1382 aa21.3■■□□□ 1
SSC5D-203ENST00000588254 SAFB2Q14151 953 aaKnown RBP eCLIP21.3■■□□□ 1
SSC5D-203ENST00000588254 MYO5CQ9NQX4 1742 aa21.3■■□□□ 1
SSC5D-203ENST00000588254 U2AF1L5P0DN76 240 aaPredicted RBP21.3■■□□□ 1
SSC5D-203ENST00000588254 U2AF1Q01081 240 aaKnown RBP eCLIP21.3■■□□□ 1
SSC5D-203ENST00000588254 NUTM2DQ5VT03 806 aaPredicted RBP21.3■■□□□ 1
SSC5D-203ENST00000588254 AFAP1Q8N556 730 aa21.3■■□□□ 1
SSC5D-203ENST00000588254 HSP90AA1P07900 732 aaKnown RBP21.28■■□□□ 1
SSC5D-203ENST00000588254 MTHFSP49914 203 aa21.28■■□□□ 1
SSC5D-203ENST00000588254 SMC4Q9NTJ3 1288 aa21.27■■□□□ 1
SSC5D-203ENST00000588254 PIK3C2GO75747 1445 aa21.27■■□□□ 1
SSC5D-203ENST00000588254 HSCBQ8IWL3 235 aa21.27■■□□□ 1
SSC5D-203ENST00000588254 MYH16Q9H6N6 1097 aa21.27■■□□□ 1
SSC5D-203ENST00000588254 U2SURPO15042 1029 aaKnown RBP21.27■□□□□ 0.99
SSC5D-203ENST00000588254 HSP90AA2PQ14568 343 aaPredicted RBP21.26■□□□□ 0.99
SSC5D-203ENST00000588254 LNPKQ9C0E8 428 aa21.26■□□□□ 0.99
SSC5D-203ENST00000588254 CHMP5Q9NZZ3 219 aa21.26■□□□□ 0.99
SSC5D-203ENST00000588254 ADGRF5Q8IZF2 1346 aa21.26■□□□□ 0.99
SSC5D-203ENST00000588254 ERBB4Q15303 1308 aa21.25■□□□□ 0.99
SSC5D-203ENST00000588254 TMEM132EQ6IEE7 984 aa21.25■□□□□ 0.99
SSC5D-203ENST00000588254 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
SSC5D-203ENST00000588254 RUNDC1Q96C34 613 aa21.24■□□□□ 0.99
SSC5D-203ENST00000588254 GRPEL1Q9HAV7 217 aa21.24■□□□□ 0.99
SSC5D-203ENST00000588254 ABCA8O94911 1581 aa21.24■□□□□ 0.99
SSC5D-203ENST00000588254 TRIM44Q96DX7 344 aaPredicted RBP21.23■□□□□ 0.99
SSC5D-203ENST00000588254 SYNJ2O15056 1496 aa21.23■□□□□ 0.99
SSC5D-203ENST00000588254 RSPH4AQ5TD94 716 aa21.23■□□□□ 0.99
SSC5D-203ENST00000588254 ARID3AQ99856 593 aa21.23■□□□□ 0.99
SSC5D-203ENST00000588254 SCAF11Q99590 1463 aaKnown RBP21.22■□□□□ 0.99
SSC5D-203ENST00000588254 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
SSC5D-203ENST00000588254 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
SSC5D-203ENST00000588254 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
SSC5D-203ENST00000588254 PKNOX2Q96KN3 472 aa21.22■□□□□ 0.99
SSC5D-203ENST00000588254 EXOSC9Q06265 439 aaKnown RBP21.21■□□□□ 0.99
SSC5D-203ENST00000588254 FSD2A1L4K1 749 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms