RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 RIMS2Q9UQ26 1411 aa14.37□□□□□ -0.11
CHAF1A-206ENST00000587739 ZNF335Q9H4Z2 1342 aaPredicted RBP14.37□□□□□ -0.11
CHAF1A-206ENST00000587739 MED14O60244 1454 aa14.37□□□□□ -0.11
CHAF1A-206ENST00000587739 SPATA31E1Q6ZUB1 1445 aa14.36□□□□□ -0.11
CHAF1A-206ENST00000587739 SENP3Q9H4L4 574 aaPredicted RBP14.36□□□□□ -0.11
CHAF1A-206ENST00000587739 RGL3Q3MIN7 710 aa14.35□□□□□ -0.11
CHAF1A-206ENST00000587739 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 CCDC144AA2RUR9 1427 aa14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 SIN3AQ96ST3 1273 aa14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 EID1Q9Y6B2 187 aa14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 POLR1AO95602 1720 aaPredicted RBP14.34□□□□□ -0.11
CHAF1A-206ENST00000587739 KIF1BO60333 1816 aa14.32□□□□□ -0.12
CHAF1A-206ENST00000587739 ILDR2Q71H61 639 aa14.32□□□□□ -0.12
CHAF1A-206ENST00000587739 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
CHAF1A-206ENST00000587739 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.31□□□□□ -0.12
CHAF1A-206ENST00000587739 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
CHAF1A-206ENST00000587739 RPGRIP1LQ68CZ1 1315 aa14.3□□□□□ -0.12
CHAF1A-206ENST00000587739 HDGFP51858 240 aaKnown RBP14.29□□□□□ -0.12
CHAF1A-206ENST00000587739 ADGRF5Q8IZF2 1346 aa14.29□□□□□ -0.12
CHAF1A-206ENST00000587739 PLEKHG1Q9ULL1 1385 aa14.29□□□□□ -0.12
CHAF1A-206ENST00000587739 ADAMTS13Q76LX8 1427 aa14.29□□□□□ -0.12
CHAF1A-206ENST00000587739 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
CHAF1A-206ENST00000587739 UBAP1LF5GYI3 381 aa14.28□□□□□ -0.12
CHAF1A-206ENST00000587739 IQGAP1P46940 1657 aa14.27□□□□□ -0.12
CHAF1A-206ENST00000587739 PPP1R15AO75807 674 aaPredicted RBP14.27□□□□□ -0.13
CHAF1A-206ENST00000587739 TBX22Q9Y458 520 aa14.27□□□□□ -0.13
CHAF1A-206ENST00000587739 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
CHAF1A-206ENST00000587739 PPLO60437 1756 aa14.24□□□□□ -0.13
CHAF1A-206ENST00000587739 NRXN3Q9Y4C0 1643 aa14.24□□□□□ -0.13
CHAF1A-206ENST00000587739 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
CHAF1A-206ENST00000587739 BCANQ96GW7 911 aa14.24□□□□□ -0.13
CHAF1A-206ENST00000587739 STRCP1A6NGW2 1772 aa14.24□□□□□ -0.13
CHAF1A-206ENST00000587739 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
CHAF1A-206ENST00000587739 KDM2AQ9Y2K7 1162 aa14.23□□□□□ -0.13
CHAF1A-206ENST00000587739 METP08581 1390 aa14.22□□□□□ -0.13
CHAF1A-206ENST00000587739 KCNA6P17658 529 aa14.22□□□□□ -0.13
CHAF1A-206ENST00000587739 L3MBTL2Q969R5 705 aa14.22□□□□□ -0.13
CHAF1A-206ENST00000587739 PTPRUQ92729 1446 aa14.22□□□□□ -0.13
CHAF1A-206ENST00000587739 IFT172Q9UG01 1749 aa14.21□□□□□ -0.13
CHAF1A-206ENST00000587739 SCAF1Q9H7N4 1312 aaKnown RBP14.2□□□□□ -0.14
CHAF1A-206ENST00000587739 SETBP1Q9Y6X0 1596 aa14.2□□□□□ -0.14
CHAF1A-206ENST00000587739 NRXN1Q9ULB1 1477 aa14.19□□□□□ -0.14
CHAF1A-206ENST00000587739 PIP4K2BP78356 416 aa14.19□□□□□ -0.14
CHAF1A-206ENST00000587739 CFAP70Q5T0N1 1121 aa14.19□□□□□ -0.14
CHAF1A-206ENST00000587739 RBM33Q96EV2 1170 aaKnown RBP14.19□□□□□ -0.14
CHAF1A-206ENST00000587739 C14orf93Q9H972 538 aaKnown RBP14.19□□□□□ -0.14
CHAF1A-206ENST00000587739 TMEM132EQ6IEE7 984 aa14.18□□□□□ -0.14
CHAF1A-206ENST00000587739 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
CHAF1A-206ENST00000587739 ALKQ9UM73 1620 aa14.18□□□□□ -0.14
CHAF1A-206ENST00000587739 CHD2O14647 1828 aaKnown RBP14.17□□□□□ -0.14
CHAF1A-206ENST00000587739 PIK3C2GO75747 1445 aa14.16□□□□□ -0.14
CHAF1A-206ENST00000587739 CPS1P31327 1500 aa14.16□□□□□ -0.14
CHAF1A-206ENST00000587739 SETD1AO15047 1707 aaKnown RBP14.16□□□□□ -0.14
CHAF1A-206ENST00000587739 SOCS7O14512 581 aa14.16□□□□□ -0.14
CHAF1A-206ENST00000587739 LRRC7Q96NW7 1537 aa14.15□□□□□ -0.14
CHAF1A-206ENST00000587739 MYOM2P54296 1465 aa14.15□□□□□ -0.14
CHAF1A-206ENST00000587739 PIK3R4Q99570 1358 aa14.15□□□□□ -0.14
CHAF1A-206ENST00000587739 HSPA1LP34931 641 aa14.14□□□□□ -0.15
CHAF1A-206ENST00000587739 NBPF8Q3BBV2 869 aa14.14□□□□□ -0.15
CHAF1A-206ENST00000587739 STAC3Q96MF2 364 aa14.14□□□□□ -0.15
CHAF1A-206ENST00000587739 NBPF1Q3BBV0 1214 aa14.13□□□□□ -0.15
CHAF1A-206ENST00000587739 PROSER2Q86WR7 435 aaPredicted RBP14.13□□□□□ -0.15
CHAF1A-206ENST00000587739 ASXL1Q8IXJ9 1541 aa14.13□□□□□ -0.15
CHAF1A-206ENST00000587739 DIP2AQ14689 1571 aa14.13□□□□□ -0.15
CHAF1A-206ENST00000587739 NWD1Q149M9 1564 aa14.12□□□□□ -0.15
CHAF1A-206ENST00000587739 XIRP1Q702N8 1843 aaKnown RBP14.11□□□□□ -0.15
CHAF1A-206ENST00000587739 TMEM94Q12767 1356 aa14.1□□□□□ -0.15
CHAF1A-206ENST00000587739 TOM1O60784 492 aa14.1□□□□□ -0.15
CHAF1A-206ENST00000587739 CCER1Q8TC90 406 aaPredicted RBP14.1□□□□□ -0.15
CHAF1A-206ENST00000587739 STK26Q9P289 416 aa14.1□□□□□ -0.15
CHAF1A-206ENST00000587739 ROBO2Q9HCK4 1378 aa14.09□□□□□ -0.15
CHAF1A-206ENST00000587739 PRAG1Q86YV5 1406 aa14.09□□□□□ -0.15
CHAF1A-206ENST00000587739 WAPLQ7Z5K2 1190 aa14.09□□□□□ -0.15
CHAF1A-206ENST00000587739 CLSPNQ9HAW4 1339 aa14.09□□□□□ -0.15
CHAF1A-206ENST00000587739 MED1Q15648 1581 aaPredicted RBP14.09□□□□□ -0.15
CHAF1A-206ENST00000587739 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
CHAF1A-206ENST00000587739 XRN1Q8IZH2 1706 aaKnown RBP14.08□□□□□ -0.16
CHAF1A-206ENST00000587739 ADGRB1O14514 1584 aa14.08□□□□□ -0.16
CHAF1A-206ENST00000587739 LRPPRCP42704 1394 aaKnown RBP14.08□□□□□ -0.16
CHAF1A-206ENST00000587739 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
CHAF1A-206ENST00000587739 NKTRP30414 1462 aaKnown RBP14.06□□□□□ -0.16
CHAF1A-206ENST00000587739 PLEKHH1Q9ULM0 1364 aa14.06□□□□□ -0.16
CHAF1A-206ENST00000587739 SIRT1Q96EB6 747 aa14.05□□□□□ -0.16
CHAF1A-206ENST00000587739 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
CHAF1A-206ENST00000587739 TONSLQ96HA7 1378 aa14.04□□□□□ -0.16
CHAF1A-206ENST00000587739 TECPR2O15040 1411 aa14.04□□□□□ -0.16
CHAF1A-206ENST00000587739 NCOA3Q9Y6Q9 1424 aa14.03□□□□□ -0.16
CHAF1A-206ENST00000587739 PTCH1Q13635 1447 aa14.02□□□□□ -0.16
CHAF1A-206ENST00000587739 C19orf44Q9H6X5 657 aa14.02□□□□□ -0.17
CHAF1A-206ENST00000587739 TIMELESSQ9UNS1 1208 aa14.02□□□□□ -0.17
CHAF1A-206ENST00000587739 PRAM1Q96QH2 718 aa14□□□□□ -0.17
CHAF1A-206ENST00000587739 SIPA1L2Q9P2F8 1722 aaPredicted RBP14□□□□□ -0.17
CHAF1A-206ENST00000587739 KIAA1210Q9ULL0 1709 aa14□□□□□ -0.17
CHAF1A-206ENST00000587739 LAMC1P11047 1609 aa13.99□□□□□ -0.17
CHAF1A-206ENST00000587739 FAM135BQ49AJ0 1406 aa13.98□□□□□ -0.17
CHAF1A-206ENST00000587739 SAFB2Q14151 953 aaKnown RBP eCLIP13.98□□□□□ -0.17
CHAF1A-206ENST00000587739 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms