RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 STRCP1A6NGW2 1772 aa35.08■■■■□ 3.21
CHAF1A-205ENST00000587580 PPP1R15AO75807 674 aaPredicted RBP35.06■■■■□ 3.2
CHAF1A-205ENST00000587580 HDGFP51858 240 aaKnown RBP35.05■■■■□ 3.2
CHAF1A-205ENST00000587580 PLEKHG1Q9ULL1 1385 aa35.02■■■■□ 3.2
CHAF1A-205ENST00000587580 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.02■■■■□ 3.2
CHAF1A-205ENST00000587580 BCANQ96GW7 911 aa35.01■■■■□ 3.2
CHAF1A-205ENST00000587580 KIF1BO60333 1816 aa35.01■■■■□ 3.19
CHAF1A-205ENST00000587580 RAB3GAP2Q9H2M9 1393 aa35■■■■□ 3.19
CHAF1A-205ENST00000587580 SENP3Q9H4L4 574 aaPredicted RBP35■■■■□ 3.19
CHAF1A-205ENST00000587580 SLC26A8Q96RN1 970 aa34.99■■■■□ 3.19
CHAF1A-205ENST00000587580 ACIN1Q9UKV3 1341 aaKnown RBP34.99■■■■□ 3.19
CHAF1A-205ENST00000587580 NUTM2DQ5VT03 806 aaPredicted RBP34.98■■■■□ 3.19
CHAF1A-205ENST00000587580 FOXD1Q16676 465 aa34.97■■■■□ 3.19
CHAF1A-205ENST00000587580 MPHOSPH9Q99550 1183 aa34.97■■■■□ 3.19
CHAF1A-205ENST00000587580 ZNF326Q5BKZ1 582 aaKnown RBP34.95■■■■□ 3.19
CHAF1A-205ENST00000587580 LRRC7Q96NW7 1537 aa34.95■■■■□ 3.19
CHAF1A-205ENST00000587580 UBAP1LF5GYI3 381 aa34.9■■■■□ 3.18
CHAF1A-205ENST00000587580 NEXMIFQ5QGS0 1516 aa34.88■■■■□ 3.17
CHAF1A-205ENST00000587580 DIP2AQ14689 1571 aa34.87■■■■□ 3.17
CHAF1A-205ENST00000587580 NWD1Q149M9 1564 aa34.87■■■■□ 3.17
CHAF1A-205ENST00000587580 KCNA6P17658 529 aa34.86■■■■□ 3.17
CHAF1A-205ENST00000587580 ADAMTS13Q76LX8 1427 aa34.86■■■■□ 3.17
CHAF1A-205ENST00000587580 CCDC144AA2RUR9 1427 aa34.84■■■■□ 3.17
CHAF1A-205ENST00000587580 TBX22Q9Y458 520 aa34.82■■■■□ 3.16
CHAF1A-205ENST00000587580 XIRP1Q702N8 1843 aaKnown RBP34.82■■■■□ 3.16
CHAF1A-205ENST00000587580 CHD2O14647 1828 aaKnown RBP34.81■■■■□ 3.16
CHAF1A-205ENST00000587580 NKTRP30414 1462 aaKnown RBP34.81■■■■□ 3.16
CHAF1A-205ENST00000587580 NRXN3Q9Y4C0 1643 aa34.81■■■■□ 3.16
CHAF1A-205ENST00000587580 SETBP1Q9Y6X0 1596 aa34.8■■■■□ 3.16
CHAF1A-205ENST00000587580 TOM1O60784 492 aa34.77■■■■□ 3.16
CHAF1A-205ENST00000587580 HRCP23327 699 aa34.74■■■■□ 3.15
CHAF1A-205ENST00000587580 PPLO60437 1756 aa34.74■■■■□ 3.15
CHAF1A-205ENST00000587580 TMEM94Q12767 1356 aa34.74■■■■□ 3.15
CHAF1A-205ENST00000587580 ALKQ9UM73 1620 aa34.73■■■■□ 3.15
CHAF1A-205ENST00000587580 PIK3R4Q99570 1358 aa34.73■■■■□ 3.15
CHAF1A-205ENST00000587580 PROSER2Q86WR7 435 aaPredicted RBP34.72■■■■□ 3.15
CHAF1A-205ENST00000587580 RPGRIP1LQ68CZ1 1315 aa34.72■■■■□ 3.15
CHAF1A-205ENST00000587580 SCAF1Q9H7N4 1312 aaKnown RBP34.71■■■■□ 3.15
CHAF1A-205ENST00000587580 PIP4K2BP78356 416 aa34.7■■■■□ 3.15
CHAF1A-205ENST00000587580 SPATA31E1Q6ZUB1 1445 aa34.69■■■■□ 3.14
CHAF1A-205ENST00000587580 VGFO15240 615 aaPredicted RBP34.67■■■■□ 3.14
CHAF1A-205ENST00000587580 RBM33Q96EV2 1170 aaKnown RBP34.67■■■■□ 3.14
CHAF1A-205ENST00000587580 PTPRUQ92729 1446 aa34.64■■■■□ 3.14
CHAF1A-205ENST00000587580 RGL3Q3MIN7 710 aa34.64■■■■□ 3.14
CHAF1A-205ENST00000587580 IFT172Q9UG01 1749 aa34.63■■■■□ 3.13
CHAF1A-205ENST00000587580 XRN1Q8IZH2 1706 aaKnown RBP34.61■■■■□ 3.13
CHAF1A-205ENST00000587580 METP08581 1390 aa34.61■■■■□ 3.13
CHAF1A-205ENST00000587580 AMOTL2Q9Y2J4 779 aa34.6■■■■□ 3.13
CHAF1A-205ENST00000587580 SETD1AO15047 1707 aaKnown RBP34.59■■■■□ 3.13
CHAF1A-205ENST00000587580 ANKRD30BQ9BXX2 1392 aa34.58■■■■□ 3.13
CHAF1A-205ENST00000587580 MSH6P52701 1360 aa34.56■■■■□ 3.12
CHAF1A-205ENST00000587580 NCOA3Q9Y6Q9 1424 aa34.53■■■■□ 3.12
CHAF1A-205ENST00000587580 ADGRF5Q8IZF2 1346 aa34.52■■■■□ 3.12
CHAF1A-205ENST00000587580 C14orf37Q86TY3 774 aa34.5■■■■□ 3.11
CHAF1A-205ENST00000587580 HSPA1LP34931 641 aa34.48■■■■□ 3.11
CHAF1A-205ENST00000587580 PIK3C2GO75747 1445 aa34.44■■■■□ 3.1
CHAF1A-205ENST00000587580 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.44■■■■□ 3.1
CHAF1A-205ENST00000587580 MYOM2P54296 1465 aa34.43■■■■□ 3.1
CHAF1A-205ENST00000587580 ROBO1Q9Y6N7 1651 aa34.4■■■■□ 3.1
CHAF1A-205ENST00000587580 PTCH1Q13635 1447 aa34.39■■■■□ 3.1
CHAF1A-205ENST00000587580 FAM135BQ49AJ0 1406 aa34.39■■■■□ 3.1
CHAF1A-205ENST00000587580 C19orf44Q9H6X5 657 aa34.39■■■■□ 3.1
CHAF1A-205ENST00000587580 NRXN1Q9ULB1 1477 aa34.38■■■■□ 3.09
CHAF1A-205ENST00000587580 PRAG1Q86YV5 1406 aa34.37■■■■□ 3.09
CHAF1A-205ENST00000587580 ASXL1Q8IXJ9 1541 aa34.35■■■■□ 3.09
CHAF1A-205ENST00000587580 ATF3P18847 181 aa34.34■■■■□ 3.09
CHAF1A-205ENST00000587580 CADPS2Q86UW7 1296 aa34.34■■■■□ 3.09
CHAF1A-205ENST00000587580 NALCNQ8IZF0 1738 aa34.34■■■■□ 3.09
CHAF1A-205ENST00000587580 SLAIN2Q9P270 581 aa34.34■■■■□ 3.09
CHAF1A-205ENST00000587580 ROBO2Q9HCK4 1378 aa34.34■■■■□ 3.09
CHAF1A-205ENST00000587580 DCCP43146 1447 aa34.33■■■■□ 3.09
CHAF1A-205ENST00000587580 ADGRL3Q9HAR2 1447 aa34.33■■■■□ 3.09
CHAF1A-205ENST00000587580 LAMC1P11047 1609 aa34.32■■■■□ 3.08
CHAF1A-205ENST00000587580 TRIM26Q12899 539 aaPredicted RBP34.31■■■■□ 3.08
CHAF1A-205ENST00000587580 KNDC1Q76NI1 1749 aa34.27■■■■□ 3.08
CHAF1A-205ENST00000587580 LRPPRCP42704 1394 aaKnown RBP34.26■■■■□ 3.08
CHAF1A-205ENST00000587580 TMEM132EQ6IEE7 984 aa34.26■■■■□ 3.08
CHAF1A-205ENST00000587580 DCAF11Q8TEB1 546 aa34.26■■■■□ 3.08
CHAF1A-205ENST00000587580 C14orf93Q9H972 538 aaKnown RBP34.26■■■■□ 3.08
CHAF1A-205ENST00000587580 STK26Q9P289 416 aa34.25■■■■□ 3.07
CHAF1A-205ENST00000587580 TECPR2O15040 1411 aa34.24■■■■□ 3.07
CHAF1A-205ENST00000587580 CFAP70Q5T0N1 1121 aa34.24■■■■□ 3.07
CHAF1A-205ENST00000587580 KDM2AQ9Y2K7 1162 aa34.24■■■■□ 3.07
CHAF1A-205ENST00000587580 DHX57Q6P158 1386 aaKnown RBP34.23■■■■□ 3.07
CHAF1A-205ENST00000587580 YTHDC2Q9H6S0 1430 aaKnown RBP34.22■■■■□ 3.07
CHAF1A-205ENST00000587580 MST1RQ04912 1400 aa34.21■■■■□ 3.07
CHAF1A-205ENST00000587580 ABCC11Q96J66 1382 aa34.2■■■■□ 3.07
CHAF1A-205ENST00000587580 PHLPP1O60346 1717 aa34.19■■■■□ 3.06
CHAF1A-205ENST00000587580 STAC3Q96MF2 364 aa34.18■■■■□ 3.06
CHAF1A-205ENST00000587580 DISP3Q9P2K9 1392 aa34.18■■■■□ 3.06
CHAF1A-205ENST00000587580 MED1Q15648 1581 aaPredicted RBP34.14■■■■□ 3.06
CHAF1A-205ENST00000587580 ADGRB1O14514 1584 aa34.12■■■■□ 3.05
CHAF1A-205ENST00000587580 BRINP3Q76B58 766 aa34.12■■■■□ 3.05
CHAF1A-205ENST00000587580 WAPLQ7Z5K2 1190 aa34.12■■■■□ 3.05
CHAF1A-205ENST00000587580 AHDC1Q5TGY3 1603 aaPredicted RBP34.12■■■■□ 3.05
CHAF1A-205ENST00000587580 PLEKHH1Q9ULM0 1364 aa34.11■■■■□ 3.05
CHAF1A-205ENST00000587580 CDC42BPGQ6DT37 1551 aa34.11■■■■□ 3.05
CHAF1A-205ENST00000587580 COL16A1Q07092 1604 aaPredicted RBP34.1■■■■□ 3.05
CHAF1A-205ENST00000587580 C1orf167Q5SNV9 1468 aa34.07■■■■□ 3.04
CHAF1A-205ENST00000587580 DLC1Q96QB1 1528 aa34.05■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms