RNA–Protein interactions for RNA: ENST00000587509.5

PRKCSH-206, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 4

Gene PRKCSH, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-206ENST00000587509 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
PRKCSH-206ENST00000587509 BCANQ96GW7 911 aa17.45■□□□□ 0.38
PRKCSH-206ENST00000587509 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
PRKCSH-206ENST00000587509 PLEKHG1Q9ULL1 1385 aa17.44■□□□□ 0.38
PRKCSH-206ENST00000587509 MYO5BQ9ULV0 1848 aa17.42■□□□□ 0.38
PRKCSH-206ENST00000587509 DIP2AQ14689 1571 aa17.42■□□□□ 0.38
PRKCSH-206ENST00000587509 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
PRKCSH-206ENST00000587509 ZNF326Q5BKZ1 582 aaKnown RBP17.4■□□□□ 0.38
PRKCSH-206ENST00000587509 KIF1BO60333 1816 aa17.4■□□□□ 0.38
PRKCSH-206ENST00000587509 NKTRP30414 1462 aaKnown RBP17.39■□□□□ 0.37
PRKCSH-206ENST00000587509 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
PRKCSH-206ENST00000587509 UBAP1LF5GYI3 381 aa17.37■□□□□ 0.37
PRKCSH-206ENST00000587509 RAB3GAP2Q9H2M9 1393 aa17.37■□□□□ 0.37
PRKCSH-206ENST00000587509 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
PRKCSH-206ENST00000587509 TOM1O60784 492 aa17.36■□□□□ 0.37
PRKCSH-206ENST00000587509 LRRC7Q96NW7 1537 aa17.36■□□□□ 0.37
PRKCSH-206ENST00000587509 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
PRKCSH-206ENST00000587509 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
PRKCSH-206ENST00000587509 PIK3R4Q99570 1358 aa17.35■□□□□ 0.37
PRKCSH-206ENST00000587509 KCNA6P17658 529 aa17.34■□□□□ 0.37
PRKCSH-206ENST00000587509 STRCP1A6NGW2 1772 aa17.33■□□□□ 0.36
PRKCSH-206ENST00000587509 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
PRKCSH-206ENST00000587509 NEXMIFQ5QGS0 1516 aa17.32■□□□□ 0.36
PRKCSH-206ENST00000587509 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
PRKCSH-206ENST00000587509 TBX22Q9Y458 520 aa17.32■□□□□ 0.36
PRKCSH-206ENST00000587509 HRCP23327 699 aa17.3■□□□□ 0.36
PRKCSH-206ENST00000587509 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
PRKCSH-206ENST00000587509 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-206ENST00000587509 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-206ENST00000587509 NUTM2DQ5VT03 806 aaPredicted RBP17.28■□□□□ 0.36
PRKCSH-206ENST00000587509 TMEM94Q12767 1356 aa17.28■□□□□ 0.36
PRKCSH-206ENST00000587509 MSH6P52701 1360 aa17.27■□□□□ 0.35
PRKCSH-206ENST00000587509 FOXD1Q16676 465 aa17.26■□□□□ 0.35
PRKCSH-206ENST00000587509 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-206ENST00000587509 CHD2O14647 1828 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-206ENST00000587509 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
PRKCSH-206ENST00000587509 ANKRD30BQ9BXX2 1392 aa17.25■□□□□ 0.35
PRKCSH-206ENST00000587509 NRXN3Q9Y4C0 1643 aa17.25■□□□□ 0.35
PRKCSH-206ENST00000587509 PIP4K2BP78356 416 aa17.24■□□□□ 0.35
PRKCSH-206ENST00000587509 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-206ENST00000587509 PPLO60437 1756 aa17.23■□□□□ 0.35
PRKCSH-206ENST00000587509 C14orf37Q86TY3 774 aa17.22■□□□□ 0.35
PRKCSH-206ENST00000587509 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
PRKCSH-206ENST00000587509 XIRP1Q702N8 1843 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-206ENST00000587509 XRN1Q8IZH2 1706 aaKnown RBP17.2■□□□□ 0.34
PRKCSH-206ENST00000587509 AMOTL2Q9Y2J4 779 aa17.18■□□□□ 0.34
PRKCSH-206ENST00000587509 PTCH1Q13635 1447 aa17.17■□□□□ 0.34
PRKCSH-206ENST00000587509 RGL3Q3MIN7 710 aa17.17■□□□□ 0.34
PRKCSH-206ENST00000587509 IFT172Q9UG01 1749 aa17.17■□□□□ 0.34
PRKCSH-206ENST00000587509 ALKQ9UM73 1620 aa17.17■□□□□ 0.34
PRKCSH-206ENST00000587509 DCCP43146 1447 aa17.16■□□□□ 0.34
PRKCSH-206ENST00000587509 MYOM2P54296 1465 aa17.16■□□□□ 0.34
PRKCSH-206ENST00000587509 METP08581 1390 aa17.15■□□□□ 0.34
PRKCSH-206ENST00000587509 CADPS2Q86UW7 1296 aa17.15■□□□□ 0.34
PRKCSH-206ENST00000587509 LAMC1P11047 1609 aa17.14■□□□□ 0.33
PRKCSH-206ENST00000587509 PRAG1Q86YV5 1406 aa17.14■□□□□ 0.33
PRKCSH-206ENST00000587509 PTPRUQ92729 1446 aa17.14■□□□□ 0.33
PRKCSH-206ENST00000587509 FAM135BQ49AJ0 1406 aa17.13■□□□□ 0.33
PRKCSH-206ENST00000587509 SETD1AO15047 1707 aaKnown RBP17.13■□□□□ 0.33
PRKCSH-206ENST00000587509 ATF3P18847 181 aa17.13■□□□□ 0.33
PRKCSH-206ENST00000587509 C19orf44Q9H6X5 657 aa17.13■□□□□ 0.33
PRKCSH-206ENST00000587509 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
PRKCSH-206ENST00000587509 RBM33Q96EV2 1170 aaKnown RBP17.11■□□□□ 0.33
PRKCSH-206ENST00000587509 STAC3Q96MF2 364 aa17.11■□□□□ 0.33
PRKCSH-206ENST00000587509 ADGRL3Q9HAR2 1447 aa17.11■□□□□ 0.33
PRKCSH-206ENST00000587509 HSPA1LP34931 641 aa17.1■□□□□ 0.33
PRKCSH-206ENST00000587509 ADGRF5Q8IZF2 1346 aa17.09■□□□□ 0.33
PRKCSH-206ENST00000587509 ROBO1Q9Y6N7 1651 aa17.09■□□□□ 0.33
PRKCSH-206ENST00000587509 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.08■□□□□ 0.32
PRKCSH-206ENST00000587509 NRXN1Q9ULB1 1477 aa17.08■□□□□ 0.32
PRKCSH-206ENST00000587509 SLAIN2Q9P270 581 aa17.08■□□□□ 0.32
PRKCSH-206ENST00000587509 TECPR2O15040 1411 aa17.06■□□□□ 0.32
PRKCSH-206ENST00000587509 LRPPRCP42704 1394 aaKnown RBP17.05■□□□□ 0.32
PRKCSH-206ENST00000587509 KNDC1Q76NI1 1749 aa17.05■□□□□ 0.32
PRKCSH-206ENST00000587509 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
PRKCSH-206ENST00000587509 NALCNQ8IZF0 1738 aa17.04■□□□□ 0.32
PRKCSH-206ENST00000587509 ROBO2Q9HCK4 1378 aa17.03■□□□□ 0.32
PRKCSH-206ENST00000587509 DISP3Q9P2K9 1392 aa17.03■□□□□ 0.32
PRKCSH-206ENST00000587509 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.32
PRKCSH-206ENST00000587509 YTHDC2Q9H6S0 1430 aaKnown RBP17.02■□□□□ 0.31
PRKCSH-206ENST00000587509 ABCC11Q96J66 1382 aa17.02■□□□□ 0.31
PRKCSH-206ENST00000587509 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
PRKCSH-206ENST00000587509 DCAF11Q8TEB1 546 aa17.01■□□□□ 0.31
PRKCSH-206ENST00000587509 CDC42BPGQ6DT37 1551 aa17.01■□□□□ 0.31
PRKCSH-206ENST00000587509 C14orf93Q9H972 538 aaKnown RBP17■□□□□ 0.31
PRKCSH-206ENST00000587509 AHDC1Q5TGY3 1603 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-206ENST00000587509 PHLPP1O60346 1717 aa16.99■□□□□ 0.31
PRKCSH-206ENST00000587509 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
PRKCSH-206ENST00000587509 MST1RQ04912 1400 aa16.99■□□□□ 0.31
PRKCSH-206ENST00000587509 STK26Q9P289 416 aa16.98■□□□□ 0.31
PRKCSH-206ENST00000587509 DLC1Q96QB1 1528 aa16.96■□□□□ 0.31
PRKCSH-206ENST00000587509 KDM2AQ9Y2K7 1162 aa16.96■□□□□ 0.31
PRKCSH-206ENST00000587509 JCADQ9P266 1359 aa16.95■□□□□ 0.3
PRKCSH-206ENST00000587509 CFAP70Q5T0N1 1121 aa16.95■□□□□ 0.3
PRKCSH-206ENST00000587509 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
PRKCSH-206ENST00000587509 SIRT1Q96EB6 747 aa16.95■□□□□ 0.3
PRKCSH-206ENST00000587509 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-206ENST00000587509 C1orf167Q5SNV9 1468 aa16.94■□□□□ 0.3
PRKCSH-206ENST00000587509 BRINP3Q76B58 766 aa16.94■□□□□ 0.3
PRKCSH-206ENST00000587509 COL16A1Q07092 1604 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms