RNA–Protein interactions for RNA: ENST00000587479.2

RANBP3-211, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-211ENST00000587479 PPP1R15AO75807 674 aaPredicted RBP23.8■■□□□ 1.4
RANBP3-211ENST00000587479 ZFYVE9O95405 1425 aa23.8■■□□□ 1.4
RANBP3-211ENST00000587479 PIP4K2BP78356 416 aa23.79■■□□□ 1.4
RANBP3-211ENST00000587479 HFM1A2PYH4 1435 aa23.78■■□□□ 1.4
RANBP3-211ENST00000587479 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.78■■□□□ 1.4
RANBP3-211ENST00000587479 SLC26A8Q96RN1 970 aa23.78■■□□□ 1.4
RANBP3-211ENST00000587479 PLEKHG1Q9ULL1 1385 aa23.77■■□□□ 1.4
RANBP3-211ENST00000587479 KCNA6P17658 529 aa23.75■■□□□ 1.39
RANBP3-211ENST00000587479 XIRP1Q702N8 1843 aaKnown RBP23.75■■□□□ 1.39
RANBP3-211ENST00000587479 TRIM52Q96A61 297 aa23.73■■□□□ 1.39
RANBP3-211ENST00000587479 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
RANBP3-211ENST00000587479 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
RANBP3-211ENST00000587479 SENP3Q9H4L4 574 aaPredicted RBP23.7■■□□□ 1.38
RANBP3-211ENST00000587479 NKTRP30414 1462 aaKnown RBP23.69■■□□□ 1.38
RANBP3-211ENST00000587479 CHD2O14647 1828 aaKnown RBP23.69■■□□□ 1.38
RANBP3-211ENST00000587479 DISP3Q9P2K9 1392 aa23.68■■□□□ 1.38
RANBP3-211ENST00000587479 PROSER2Q86WR7 435 aaPredicted RBP23.68■■□□□ 1.38
RANBP3-211ENST00000587479 TRPM2O94759 1503 aa23.68■■□□□ 1.38
RANBP3-211ENST00000587479 DIP2AQ14689 1571 aa23.67■■□□□ 1.38
RANBP3-211ENST00000587479 HSPA1LP34931 641 aa23.67■■□□□ 1.38
RANBP3-211ENST00000587479 NUTM2DQ5VT03 806 aaPredicted RBP23.67■■□□□ 1.38
RANBP3-211ENST00000587479 TBX22Q9Y458 520 aa23.67■■□□□ 1.38
RANBP3-211ENST00000587479 TMEM94Q12767 1356 aa23.66■■□□□ 1.38
RANBP3-211ENST00000587479 KIF1BO60333 1816 aa23.66■■□□□ 1.38
RANBP3-211ENST00000587479 CLTCL1P53675 1640 aa23.66■■□□□ 1.38
RANBP3-211ENST00000587479 ZNF326Q5BKZ1 582 aaKnown RBP23.64■■□□□ 1.37
RANBP3-211ENST00000587479 SLC4A1APQ9BWU0 796 aaKnown RBP23.64■■□□□ 1.37
RANBP3-211ENST00000587479 ADAMTS13Q76LX8 1427 aa23.62■■□□□ 1.37
RANBP3-211ENST00000587479 PIK3R4Q99570 1358 aa23.6■■□□□ 1.37
RANBP3-211ENST00000587479 MSH6P52701 1360 aa23.57■■□□□ 1.36
RANBP3-211ENST00000587479 RBM33Q96EV2 1170 aaKnown RBP23.57■■□□□ 1.36
RANBP3-211ENST00000587479 SETBP1Q9Y6X0 1596 aa23.56■■□□□ 1.36
RANBP3-211ENST00000587479 NEXMIFQ5QGS0 1516 aa23.55■■□□□ 1.36
RANBP3-211ENST00000587479 ACIN1Q9UKV3 1341 aaKnown RBP23.55■■□□□ 1.36
RANBP3-211ENST00000587479 NRXN3Q9Y4C0 1643 aa23.54■■□□□ 1.36
RANBP3-211ENST00000587479 NCOA3Q9Y6Q9 1424 aa23.53■■□□□ 1.36
RANBP3-211ENST00000587479 FAM135BQ49AJ0 1406 aa23.52■■□□□ 1.36
RANBP3-211ENST00000587479 C14orf37Q86TY3 774 aa23.5■■□□□ 1.35
RANBP3-211ENST00000587479 ROBO1Q9Y6N7 1651 aa23.49■■□□□ 1.35
RANBP3-211ENST00000587479 AMOTL2Q9Y2J4 779 aa23.49■■□□□ 1.35
RANBP3-211ENST00000587479 SETD5Q9C0A6 1442 aa23.49■■□□□ 1.35
RANBP3-211ENST00000587479 MED1Q15648 1581 aaPredicted RBP23.48■■□□□ 1.35
RANBP3-211ENST00000587479 MPHOSPH9Q99550 1183 aa23.48■■□□□ 1.35
RANBP3-211ENST00000587479 RPGRIP1LQ68CZ1 1315 aa23.48■■□□□ 1.35
RANBP3-211ENST00000587479 VGFO15240 615 aaPredicted RBP23.47■■□□□ 1.35
RANBP3-211ENST00000587479 FOXD1Q16676 465 aa23.47■■□□□ 1.35
RANBP3-211ENST00000587479 PTPRUQ92729 1446 aa23.47■■□□□ 1.35
RANBP3-211ENST00000587479 XRN1Q8IZH2 1706 aaKnown RBP23.47■■□□□ 1.35
RANBP3-211ENST00000587479 PPLO60437 1756 aa23.45■■□□□ 1.34
RANBP3-211ENST00000587479 CCDC144AA2RUR9 1427 aa23.45■■□□□ 1.34
RANBP3-211ENST00000587479 SLAIN2Q9P270 581 aa23.45■■□□□ 1.34
RANBP3-211ENST00000587479 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.45■■□□□ 1.34
RANBP3-211ENST00000587479 METP08581 1390 aa23.43■■□□□ 1.34
RANBP3-211ENST00000587479 C19orf44Q9H6X5 657 aa23.43■■□□□ 1.34
RANBP3-211ENST00000587479 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
RANBP3-211ENST00000587479 CADPS2Q86UW7 1296 aa23.42■■□□□ 1.34
RANBP3-211ENST00000587479 ATF3P18847 181 aa23.41■■□□□ 1.34
RANBP3-211ENST00000587479 SETD1AO15047 1707 aaKnown RBP23.37■■□□□ 1.33
RANBP3-211ENST00000587479 PHLPP1O60346 1717 aa23.37■■□□□ 1.33
RANBP3-211ENST00000587479 RAB3GAP2Q9H2M9 1393 aa23.37■■□□□ 1.33
RANBP3-211ENST00000587479 PHF23Q9BUL5 403 aaPredicted RBP23.36■■□□□ 1.33
RANBP3-211ENST00000587479 DCCP43146 1447 aa23.35■■□□□ 1.33
RANBP3-211ENST00000587479 SPATA31E1Q6ZUB1 1445 aa23.34■■□□□ 1.33
RANBP3-211ENST00000587479 IFT172Q9UG01 1749 aa23.34■■□□□ 1.33
RANBP3-211ENST00000587479 RGL3Q3MIN7 710 aa23.34■■□□□ 1.33
RANBP3-211ENST00000587479 ANKRD30BQ9BXX2 1392 aa23.32■■□□□ 1.32
RANBP3-211ENST00000587479 PTCH1Q13635 1447 aa23.3■■□□□ 1.32
RANBP3-211ENST00000587479 ADGRL3Q9HAR2 1447 aa23.3■■□□□ 1.32
RANBP3-211ENST00000587479 NALCNQ8IZF0 1738 aa23.29■■□□□ 1.32
RANBP3-211ENST00000587479 SOCS7O14512 581 aa23.28■■□□□ 1.32
RANBP3-211ENST00000587479 ADGRF5Q8IZF2 1346 aa23.28■■□□□ 1.32
RANBP3-211ENST00000587479 COL16A1Q07092 1604 aaPredicted RBP23.26■■□□□ 1.31
RANBP3-211ENST00000587479 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
RANBP3-211ENST00000587479 PRAG1Q86YV5 1406 aa23.26■■□□□ 1.31
RANBP3-211ENST00000587479 JCADQ9P266 1359 aa23.25■■□□□ 1.31
RANBP3-211ENST00000587479 MST1RQ04912 1400 aa23.25■■□□□ 1.31
RANBP3-211ENST00000587479 HRCP23327 699 aa23.24■■□□□ 1.31
RANBP3-211ENST00000587479 ROBO2Q9HCK4 1378 aa23.24■■□□□ 1.31
RANBP3-211ENST00000587479 BRINP3Q76B58 766 aa23.23■■□□□ 1.31
RANBP3-211ENST00000587479 ASXL1Q8IXJ9 1541 aa23.21■■□□□ 1.31
RANBP3-211ENST00000587479 PIK3C2GO75747 1445 aa23.2■■□□□ 1.3
RANBP3-211ENST00000587479 NHSL1Q5SYE7 1610 aa23.18■■□□□ 1.3
RANBP3-211ENST00000587479 MYOM2P54296 1465 aa23.17■■□□□ 1.3
RANBP3-211ENST00000587479 SHPRHQ149N8 1683 aa23.17■■□□□ 1.3
RANBP3-211ENST00000587479 LAMC1P11047 1609 aa23.17■■□□□ 1.3
RANBP3-211ENST00000587479 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
RANBP3-211ENST00000587479 LRPPRCP42704 1394 aaKnown RBP23.16■■□□□ 1.3
RANBP3-211ENST00000587479 STK26Q9P289 416 aa23.16■■□□□ 1.3
RANBP3-211ENST00000587479 SPATA31A6Q5VVP1 1343 aa23.15■■□□□ 1.3
RANBP3-211ENST00000587479 C1orf167Q5SNV9 1468 aa23.15■■□□□ 1.3
RANBP3-211ENST00000587479 TECPR2O15040 1411 aa23.15■■□□□ 1.3
RANBP3-211ENST00000587479 NRXN1Q9ULB1 1477 aa23.14■■□□□ 1.29
RANBP3-211ENST00000587479 ABCC11Q96J66 1382 aa23.14■■□□□ 1.29
RANBP3-211ENST00000587479 TMEM132EQ6IEE7 984 aa23.13■■□□□ 1.29
RANBP3-211ENST00000587479 CDC42BPGQ6DT37 1551 aa23.12■■□□□ 1.29
RANBP3-211ENST00000587479 C14orf93Q9H972 538 aaKnown RBP23.12■■□□□ 1.29
RANBP3-211ENST00000587479 YTHDC2Q9H6S0 1430 aaKnown RBP23.11■■□□□ 1.29
RANBP3-211ENST00000587479 RGS17Q9UGC6 210 aaPredicted RBP23.11■■□□□ 1.29
RANBP3-211ENST00000587479 LRRC59Q96AG4 307 aaKnown RBP23.09■■□□□ 1.29
RANBP3-211ENST00000587479 DHX57Q6P158 1386 aaKnown RBP23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms