RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ROBO1Q9Y6N7 1651 aa25.4■■□□□ 1.66
NPC1-205ENST00000587163 NWD1Q149M9 1564 aa25.39■■□□□ 1.65
NPC1-205ENST00000587163 RPRD2Q5VT52 1461 aaKnown RBP25.38■■□□□ 1.65
NPC1-205ENST00000587163 ZFYVE9O95405 1425 aa25.37■■□□□ 1.65
NPC1-205ENST00000587163 NKTRP30414 1462 aaKnown RBP25.37■■□□□ 1.65
NPC1-205ENST00000587163 MYO5BQ9ULV0 1848 aa25.37■■□□□ 1.65
NPC1-205ENST00000587163 POTEAQ6S8J7 498 aa25.34■■□□□ 1.65
NPC1-205ENST00000587163 PLEKHG1Q9ULL1 1385 aa25.33■■□□□ 1.65
NPC1-205ENST00000587163 SLAIN2Q9P270 581 aa25.33■■□□□ 1.65
NPC1-205ENST00000587163 RIMS2Q9UQ26 1411 aa25.33■■□□□ 1.65
NPC1-205ENST00000587163 GCC2Q8IWJ2 1684 aa25.32■■□□□ 1.64
NPC1-205ENST00000587163 MSH6P52701 1360 aa25.32■■□□□ 1.64
NPC1-205ENST00000587163 TMEM131LA2VDJ0 1609 aa25.32■■□□□ 1.64
NPC1-205ENST00000587163 CHD2O14647 1828 aaKnown RBP25.3■■□□□ 1.64
NPC1-205ENST00000587163 PPP1R15AO75807 674 aaPredicted RBP25.3■■□□□ 1.64
NPC1-205ENST00000587163 HDGFP51858 240 aaKnown RBP25.28■■□□□ 1.64
NPC1-205ENST00000587163 TBX22Q9Y458 520 aa25.28■■□□□ 1.64
NPC1-205ENST00000587163 CHGAP10645 457 aaKnown RBP25.27■■□□□ 1.64
NPC1-205ENST00000587163 UNC13BO14795 1591 aa25.27■■□□□ 1.64
NPC1-205ENST00000587163 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
NPC1-205ENST00000587163 PHLPP1O60346 1717 aa25.24■■□□□ 1.63
NPC1-205ENST00000587163 E9PCH4 1651 aa25.24■■□□□ 1.63
NPC1-205ENST00000587163 ADAMTS13Q76LX8 1427 aa25.22■■□□□ 1.63
NPC1-205ENST00000587163 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.22■■□□□ 1.63
NPC1-205ENST00000587163 JCADQ9P266 1359 aa25.19■■□□□ 1.62
NPC1-205ENST00000587163 NCOA3Q9Y6Q9 1424 aa25.19■■□□□ 1.62
NPC1-205ENST00000587163 ROCK1Q13464 1354 aa25.18■■□□□ 1.62
NPC1-205ENST00000587163 C14orf37Q86TY3 774 aa25.17■■□□□ 1.62
NPC1-205ENST00000587163 COL16A1Q07092 1604 aaPredicted RBP25.16■■□□□ 1.62
NPC1-205ENST00000587163 IQGAP3Q86VI3 1631 aa25.16■■□□□ 1.62
NPC1-205ENST00000587163 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.15■■□□□ 1.62
NPC1-205ENST00000587163 C19orf44Q9H6X5 657 aa25.14■■□□□ 1.62
NPC1-205ENST00000587163 NUP155O75694 1391 aa25.14■■□□□ 1.61
NPC1-205ENST00000587163 PIK3R4Q99570 1358 aa25.13■■□□□ 1.61
NPC1-205ENST00000587163 DIP2AQ14689 1571 aa25.13■■□□□ 1.61
NPC1-205ENST00000587163 CADPS2Q86UW7 1296 aa25.12■■□□□ 1.61
NPC1-205ENST00000587163 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
NPC1-205ENST00000587163 ITGAEP38570 1179 aa25.11■■□□□ 1.61
NPC1-205ENST00000587163 AMOTL2Q9Y2J4 779 aa25.11■■□□□ 1.61
NPC1-205ENST00000587163 ATF3P18847 181 aa25.1■■□□□ 1.61
NPC1-205ENST00000587163 LRP6O75581 1613 aa25.1■■□□□ 1.61
NPC1-205ENST00000587163 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.61
NPC1-205ENST00000587163 TRPM2O94759 1503 aa25.07■■□□□ 1.6
NPC1-205ENST00000587163 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
NPC1-205ENST00000587163 SPATA31A6Q5VVP1 1343 aa25.07■■□□□ 1.6
NPC1-205ENST00000587163 PPARGC1BQ86YN6 1023 aaKnown RBP25.05■■□□□ 1.6
NPC1-205ENST00000587163 BRINP3Q76B58 766 aa25.04■■□□□ 1.6
NPC1-205ENST00000587163 NRXN3Q9Y4C0 1643 aa25.04■■□□□ 1.6
NPC1-205ENST00000587163 MEX3CQ5U5Q3 659 aaKnown RBP25.02■■□□□ 1.6
NPC1-205ENST00000587163 SHPRHQ149N8 1683 aa25.01■■□□□ 1.59
NPC1-205ENST00000587163 XRN1Q8IZH2 1706 aaKnown RBP24.99■■□□□ 1.59
NPC1-205ENST00000587163 SETBP1Q9Y6X0 1596 aa24.99■■□□□ 1.59
NPC1-205ENST00000587163 SPHKAPQ2M3C7 1700 aa24.98■■□□□ 1.59
NPC1-205ENST00000587163 METP08581 1390 aa24.98■■□□□ 1.59
NPC1-205ENST00000587163 ZNF326Q5BKZ1 582 aaKnown RBP24.98■■□□□ 1.59
NPC1-205ENST00000587163 ZNF772Q68DY9 489 aaPredicted RBP24.98■■□□□ 1.59
NPC1-205ENST00000587163 DCCP43146 1447 aa24.96■■□□□ 1.59
NPC1-205ENST00000587163 NUTM2BA6NNL0 878 aaPredicted RBP24.96■■□□□ 1.59
NPC1-205ENST00000587163 NUTM2EB1AL46 878 aaPredicted RBP24.96■■□□□ 1.59
NPC1-205ENST00000587163 NUTM2AQ8IVF1 878 aaPredicted RBP24.96■■□□□ 1.59
NPC1-205ENST00000587163 MST1RQ04912 1400 aa24.95■■□□□ 1.58
NPC1-205ENST00000587163 TRIM52Q96A61 297 aa24.94■■□□□ 1.58
NPC1-205ENST00000587163 ASXL1Q8IXJ9 1541 aa24.94■■□□□ 1.58
NPC1-205ENST00000587163 CLTCL1P53675 1640 aa24.9■■□□□ 1.58
NPC1-205ENST00000587163 SETD5Q9C0A6 1442 aa24.9■■□□□ 1.58
NPC1-205ENST00000587163 DDX17Q92841 729 aaKnown RBP24.9■■□□□ 1.58
NPC1-205ENST00000587163 UPF1Q92900 1129 aaKnown RBP eCLIP24.9■■□□□ 1.58
NPC1-205ENST00000587163 NEXMIFQ5QGS0 1516 aa24.89■■□□□ 1.57
NPC1-205ENST00000587163 NHSL1Q5SYE7 1610 aa24.88■■□□□ 1.57
NPC1-205ENST00000587163 RXRBP28702 533 aa24.88■■□□□ 1.57
NPC1-205ENST00000587163 AFF2P51816 1311 aa24.86■■□□□ 1.57
NPC1-205ENST00000587163 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
NPC1-205ENST00000587163 LRRC59Q96AG4 307 aaKnown RBP24.86■■□□□ 1.57
NPC1-205ENST00000587163 NALCNQ8IZF0 1738 aa24.84■■□□□ 1.57
NPC1-205ENST00000587163 NAIPQ13075 1403 aa24.82■■□□□ 1.56
NPC1-205ENST00000587163 PNPLA6Q8IY17 1366 aa24.81■■□□□ 1.56
NPC1-205ENST00000587163 KIF1BO60333 1816 aa24.8■■□□□ 1.56
NPC1-205ENST00000587163 CDK12Q9NYV4 1490 aaPredicted RBP24.79■■□□□ 1.56
NPC1-205ENST00000587163 C8orf37Q96NL8 207 aa24.79■■□□□ 1.56
NPC1-205ENST00000587163 C1orf167Q5SNV9 1468 aa24.78■■□□□ 1.56
NPC1-205ENST00000587163 RRBP1Q9P2E9 1410 aaKnown RBP24.78■■□□□ 1.56
NPC1-205ENST00000587163 ROBO2Q9HCK4 1378 aa24.77■■□□□ 1.56
NPC1-205ENST00000587163 VGFO15240 615 aaPredicted RBP24.76■■□□□ 1.55
NPC1-205ENST00000587163 QTRT2Q9H974 415 aaKnown RBP24.76■■□□□ 1.55
NPC1-205ENST00000587163 ORAI2Q96SN7 254 aa24.75■■□□□ 1.55
NPC1-205ENST00000587163 PTCH1Q13635 1447 aa24.74■■□□□ 1.55
NPC1-205ENST00000587163 ADAMTS2O95450 1211 aa24.72■■□□□ 1.55
NPC1-205ENST00000587163 RBM6P78332 1123 aaKnown RBP24.71■■□□□ 1.55
NPC1-205ENST00000587163 LAMC1P11047 1609 aa24.71■■□□□ 1.55
NPC1-205ENST00000587163 RGS12O14924 1447 aa24.7■■□□□ 1.55
NPC1-205ENST00000587163 SOS2Q07890 1332 aaPredicted RBP24.7■■□□□ 1.54
NPC1-205ENST00000587163 NGLY1Q96IV0 654 aa24.7■■□□□ 1.54
NPC1-205ENST00000587163 RPGRIP1LQ68CZ1 1315 aa24.69■■□□□ 1.54
NPC1-205ENST00000587163 SLC4A1APQ9BWU0 796 aaKnown RBP24.67■■□□□ 1.54
NPC1-205ENST00000587163 PRAG1Q86YV5 1406 aa24.67■■□□□ 1.54
NPC1-205ENST00000587163 HFM1A2PYH4 1435 aa24.66■■□□□ 1.54
NPC1-205ENST00000587163 PPLO60437 1756 aa24.65■■□□□ 1.54
NPC1-205ENST00000587163 FOXD1Q16676 465 aa24.63■■□□□ 1.53
NPC1-205ENST00000587163 USP21Q9UK80 565 aa24.61■■□□□ 1.53
NPC1-205ENST00000587163 FNBP4Q8N3X1 1017 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms