RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 SPHKAPQ2M3C7 1700 aa30.25■■■□□ 2.43
VAT1-203ENST00000587062 TOM1O60784 492 aa30.24■■■□□ 2.43
VAT1-203ENST00000587062 MYO5BQ9ULV0 1848 aa30.21■■■□□ 2.43
VAT1-203ENST00000587062 SLC26A8Q96RN1 970 aa30.2■■■□□ 2.43
VAT1-203ENST00000587062 PLEKHG1Q9ULL1 1385 aa30.19■■■□□ 2.42
VAT1-203ENST00000587062 ZFYVE9O95405 1425 aa30.19■■■□□ 2.42
VAT1-203ENST00000587062 ZNF326Q5BKZ1 582 aaKnown RBP30.18■■■□□ 2.42
VAT1-203ENST00000587062 KCNA6P17658 529 aa30.16■■■□□ 2.42
VAT1-203ENST00000587062 TRPM2O94759 1503 aa30.13■■■□□ 2.41
VAT1-203ENST00000587062 SETD5Q9C0A6 1442 aa30.13■■■□□ 2.41
VAT1-203ENST00000587062 LRRC7Q96NW7 1537 aa30.12■■■□□ 2.41
VAT1-203ENST00000587062 TBX22Q9Y458 520 aa30.12■■■□□ 2.41
VAT1-203ENST00000587062 SCAF1Q9H7N4 1312 aaKnown RBP30.12■■■□□ 2.41
VAT1-203ENST00000587062 NUTM2DQ5VT03 806 aaPredicted RBP30.1■■■□□ 2.41
VAT1-203ENST00000587062 STRCP1A6NGW2 1772 aa30.1■■■□□ 2.41
VAT1-203ENST00000587062 PROSER2Q86WR7 435 aaPredicted RBP30.08■■■□□ 2.41
VAT1-203ENST00000587062 MPHOSPH9Q99550 1183 aa30.08■■■□□ 2.41
VAT1-203ENST00000587062 SENP3Q9H4L4 574 aaPredicted RBP30.08■■■□□ 2.41
VAT1-203ENST00000587062 KIF1BO60333 1816 aa30.08■■■□□ 2.41
VAT1-203ENST00000587062 PIP4K2BP78356 416 aa30.07■■■□□ 2.4
VAT1-203ENST00000587062 CLTCL1P53675 1640 aa30.04■■■□□ 2.4
VAT1-203ENST00000587062 DIP2AQ14689 1571 aa30.03■■■□□ 2.4
VAT1-203ENST00000587062 NKTRP30414 1462 aaKnown RBP30.01■■■□□ 2.4
VAT1-203ENST00000587062 PIK3R4Q99570 1358 aa30.01■■■□□ 2.39
VAT1-203ENST00000587062 RPGRIP1LQ68CZ1 1315 aa30■■■□□ 2.39
VAT1-203ENST00000587062 VGFO15240 615 aaPredicted RBP30■■■□□ 2.39
VAT1-203ENST00000587062 TMEM94Q12767 1356 aa29.98■■■□□ 2.39
VAT1-203ENST00000587062 CCDC144AA2RUR9 1427 aa29.97■■■□□ 2.39
VAT1-203ENST00000587062 FOXD1Q16676 465 aa29.97■■■□□ 2.39
VAT1-203ENST00000587062 NWD1Q149M9 1564 aa29.96■■■□□ 2.39
VAT1-203ENST00000587062 RAB3GAP2Q9H2M9 1393 aa29.96■■■□□ 2.39
VAT1-203ENST00000587062 CHD2O14647 1828 aaKnown RBP29.96■■■□□ 2.39
VAT1-203ENST00000587062 ADAMTS13Q76LX8 1427 aa29.95■■■□□ 2.38
VAT1-203ENST00000587062 HRCP23327 699 aa29.92■■■□□ 2.38
VAT1-203ENST00000587062 MSH6P52701 1360 aa29.91■■■□□ 2.38
VAT1-203ENST00000587062 NEXMIFQ5QGS0 1516 aa29.91■■■□□ 2.38
VAT1-203ENST00000587062 C14orf37Q86TY3 774 aa29.9■■■□□ 2.38
VAT1-203ENST00000587062 AMOTL2Q9Y2J4 779 aa29.89■■■□□ 2.38
VAT1-203ENST00000587062 SETBP1Q9Y6X0 1596 aa29.89■■■□□ 2.38
VAT1-203ENST00000587062 NCOA3Q9Y6Q9 1424 aa29.88■■■□□ 2.37
VAT1-203ENST00000587062 XIRP1Q702N8 1843 aaKnown RBP29.88■■■□□ 2.37
VAT1-203ENST00000587062 HSPA1LP34931 641 aa29.85■■■□□ 2.37
VAT1-203ENST00000587062 RBM33Q96EV2 1170 aaKnown RBP29.85■■■□□ 2.37
VAT1-203ENST00000587062 RGL3Q3MIN7 710 aa29.83■■■□□ 2.37
VAT1-203ENST00000587062 ALKQ9UM73 1620 aa29.79■■■□□ 2.36
VAT1-203ENST00000587062 NRXN3Q9Y4C0 1643 aa29.79■■■□□ 2.36
VAT1-203ENST00000587062 C19orf44Q9H6X5 657 aa29.79■■■□□ 2.36
VAT1-203ENST00000587062 ANKRD30BQ9BXX2 1392 aa29.78■■■□□ 2.36
VAT1-203ENST00000587062 ATF3P18847 181 aa29.77■■■□□ 2.36
VAT1-203ENST00000587062 CADPS2Q86UW7 1296 aa29.77■■■□□ 2.36
VAT1-203ENST00000587062 FAM135BQ49AJ0 1406 aa29.77■■■□□ 2.36
VAT1-203ENST00000587062 PPLO60437 1756 aa29.76■■■□□ 2.35
VAT1-203ENST00000587062 METP08581 1390 aa29.76■■■□□ 2.35
VAT1-203ENST00000587062 SLAIN2Q9P270 581 aa29.75■■■□□ 2.35
VAT1-203ENST00000587062 PTPRUQ92729 1446 aa29.74■■■□□ 2.35
VAT1-203ENST00000587062 SPATA31E1Q6ZUB1 1445 aa29.73■■■□□ 2.35
VAT1-203ENST00000587062 DISP3Q9P2K9 1392 aa29.73■■■□□ 2.35
VAT1-203ENST00000587062 XRN1Q8IZH2 1706 aaKnown RBP29.68■■■□□ 2.34
VAT1-203ENST00000587062 ADGRF5Q8IZF2 1346 aa29.66■■■□□ 2.34
VAT1-203ENST00000587062 DCCP43146 1447 aa29.63■■■□□ 2.33
VAT1-203ENST00000587062 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.63■■■□□ 2.33
VAT1-203ENST00000587062 ROBO1Q9Y6N7 1651 aa29.63■■■□□ 2.33
VAT1-203ENST00000587062 IFT172Q9UG01 1749 aa29.61■■■□□ 2.33
VAT1-203ENST00000587062 PTCH1Q13635 1447 aa29.6■■■□□ 2.33
VAT1-203ENST00000587062 STAC3Q96MF2 364 aa29.59■■■□□ 2.33
VAT1-203ENST00000587062 SETD1AO15047 1707 aaKnown RBP29.58■■■□□ 2.33
VAT1-203ENST00000587062 ADGRL3Q9HAR2 1447 aa29.56■■■□□ 2.32
VAT1-203ENST00000587062 PIK3C2GO75747 1445 aa29.55■■■□□ 2.32
VAT1-203ENST00000587062 MYOM2P54296 1465 aa29.54■■■□□ 2.32
VAT1-203ENST00000587062 PRAG1Q86YV5 1406 aa29.54■■■□□ 2.32
VAT1-203ENST00000587062 C14orf93Q9H972 538 aaKnown RBP29.52■■■□□ 2.32
VAT1-203ENST00000587062 STK26Q9P289 416 aa29.52■■■□□ 2.32
VAT1-203ENST00000587062 ROBO2Q9HCK4 1378 aa29.52■■■□□ 2.32
VAT1-203ENST00000587062 DCAF11Q8TEB1 546 aa29.5■■■□□ 2.31
VAT1-203ENST00000587062 PHF23Q9BUL5 403 aaPredicted RBP29.5■■■□□ 2.31
VAT1-203ENST00000587062 LRPPRCP42704 1394 aaKnown RBP29.5■■■□□ 2.31
VAT1-203ENST00000587062 DHX57Q6P158 1386 aaKnown RBP29.5■■■□□ 2.31
VAT1-203ENST00000587062 PHLPP1O60346 1717 aa29.48■■■□□ 2.31
VAT1-203ENST00000587062 TMEM132EQ6IEE7 984 aa29.48■■■□□ 2.31
VAT1-203ENST00000587062 KDM2AQ9Y2K7 1162 aa29.48■■■□□ 2.31
VAT1-203ENST00000587062 LAMC1P11047 1609 aa29.48■■■□□ 2.31
VAT1-203ENST00000587062 ABCC11Q96J66 1382 aa29.48■■■□□ 2.31
VAT1-203ENST00000587062 MED1Q15648 1581 aaPredicted RBP29.47■■■□□ 2.31
VAT1-203ENST00000587062 NRXN1Q9ULB1 1477 aa29.46■■■□□ 2.31
VAT1-203ENST00000587062 CFAP70Q5T0N1 1121 aa29.45■■■□□ 2.31
VAT1-203ENST00000587062 BRINP3Q76B58 766 aa29.45■■■□□ 2.31
VAT1-203ENST00000587062 MST1RQ04912 1400 aa29.45■■■□□ 2.3
VAT1-203ENST00000587062 NALCNQ8IZF0 1738 aa29.44■■■□□ 2.3
VAT1-203ENST00000587062 TECPR2O15040 1411 aa29.44■■■□□ 2.3
VAT1-203ENST00000587062 SIRT1Q96EB6 747 aa29.43■■■□□ 2.3
VAT1-203ENST00000587062 YTHDC2Q9H6S0 1430 aaKnown RBP29.43■■■□□ 2.3
VAT1-203ENST00000587062 JCADQ9P266 1359 aa29.42■■■□□ 2.3
VAT1-203ENST00000587062 KNDC1Q76NI1 1749 aa29.39■■■□□ 2.3
VAT1-203ENST00000587062 AHDC1Q5TGY3 1603 aaPredicted RBP29.38■■■□□ 2.29
VAT1-203ENST00000587062 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
VAT1-203ENST00000587062 WAPLQ7Z5K2 1190 aa29.38■■■□□ 2.29
VAT1-203ENST00000587062 ASXL1Q8IXJ9 1541 aa29.36■■■□□ 2.29
VAT1-203ENST00000587062 C1orf167Q5SNV9 1468 aa29.36■■■□□ 2.29
VAT1-203ENST00000587062 LRRC59Q96AG4 307 aaKnown RBP29.34■■■□□ 2.29
VAT1-203ENST00000587062 POGKQ9P215 609 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms