RNA–Protein interactions for RNA: ENST00000587019.5

CCDC130-206, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-206ENST00000587019 RIMS2Q9UQ26 1411 aa25.65■■□□□ 1.7
CCDC130-206ENST00000587019 HSPA1LP34931 641 aa25.63■■□□□ 1.69
CCDC130-206ENST00000587019 NKTRP30414 1462 aaKnown RBP25.62■■□□□ 1.69
CCDC130-206ENST00000587019 PLEKHG1Q9ULL1 1385 aa25.62■■□□□ 1.69
CCDC130-206ENST00000587019 SLC26A8Q96RN1 970 aa25.62■■□□□ 1.69
CCDC130-206ENST00000587019 SPHKAPQ2M3C7 1700 aa25.61■■□□□ 1.69
CCDC130-206ENST00000587019 PPP1R15AO75807 674 aaPredicted RBP25.6■■□□□ 1.69
CCDC130-206ENST00000587019 NAIPQ13075 1403 aa25.58■■□□□ 1.69
CCDC130-206ENST00000587019 CHGAP10645 457 aaKnown RBP25.58■■□□□ 1.69
CCDC130-206ENST00000587019 KCNA6P17658 529 aa25.58■■□□□ 1.69
CCDC130-206ENST00000587019 HDGFP51858 240 aaKnown RBP25.58■■□□□ 1.69
CCDC130-206ENST00000587019 BCANQ96GW7 911 aa25.58■■□□□ 1.69
CCDC130-206ENST00000587019 TMEM94Q12767 1356 aa25.56■■□□□ 1.68
CCDC130-206ENST00000587019 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.55■■□□□ 1.68
CCDC130-206ENST00000587019 DIP2AQ14689 1571 aa25.55■■□□□ 1.68
CCDC130-206ENST00000587019 MED1Q15648 1581 aaPredicted RBP25.53■■□□□ 1.68
CCDC130-206ENST00000587019 CHD2O14647 1828 aaKnown RBP25.52■■□□□ 1.68
CCDC130-206ENST00000587019 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
CCDC130-206ENST00000587019 ILDR2Q71H61 639 aa25.51■■□□□ 1.67
CCDC130-206ENST00000587019 SENP3Q9H4L4 574 aaPredicted RBP25.51■■□□□ 1.67
CCDC130-206ENST00000587019 TRPM2O94759 1503 aa25.49■■□□□ 1.67
CCDC130-206ENST00000587019 PROSER2Q86WR7 435 aaPredicted RBP25.49■■□□□ 1.67
CCDC130-206ENST00000587019 ADAMTS13Q76LX8 1427 aa25.48■■□□□ 1.67
CCDC130-206ENST00000587019 CLTCL1P53675 1640 aa25.47■■□□□ 1.67
CCDC130-206ENST00000587019 TBX22Q9Y458 520 aa25.46■■□□□ 1.67
CCDC130-206ENST00000587019 NUTM2DQ5VT03 806 aaPredicted RBP25.45■■□□□ 1.66
CCDC130-206ENST00000587019 MSH6P52701 1360 aa25.44■■□□□ 1.66
CCDC130-206ENST00000587019 RBM33Q96EV2 1170 aaKnown RBP25.43■■□□□ 1.66
CCDC130-206ENST00000587019 FAM135BQ49AJ0 1406 aa25.43■■□□□ 1.66
CCDC130-206ENST00000587019 PIK3R4Q99570 1358 aa25.43■■□□□ 1.66
CCDC130-206ENST00000587019 SETBP1Q9Y6X0 1596 aa25.42■■□□□ 1.66
CCDC130-206ENST00000587019 ROBO1Q9Y6N7 1651 aa25.42■■□□□ 1.66
CCDC130-206ENST00000587019 NRXN3Q9Y4C0 1643 aa25.41■■□□□ 1.66
CCDC130-206ENST00000587019 KIF1BO60333 1816 aa25.39■■□□□ 1.65
CCDC130-206ENST00000587019 NEXMIFQ5QGS0 1516 aa25.38■■□□□ 1.65
CCDC130-206ENST00000587019 NCOA3Q9Y6Q9 1424 aa25.37■■□□□ 1.65
CCDC130-206ENST00000587019 ZNF326Q5BKZ1 582 aaKnown RBP25.37■■□□□ 1.65
CCDC130-206ENST00000587019 TRIM52Q96A61 297 aa25.37■■□□□ 1.65
CCDC130-206ENST00000587019 XRN1Q8IZH2 1706 aaKnown RBP25.34■■□□□ 1.65
CCDC130-206ENST00000587019 SOCS7O14512 581 aa25.34■■□□□ 1.65
CCDC130-206ENST00000587019 PTPRUQ92729 1446 aa25.32■■□□□ 1.64
CCDC130-206ENST00000587019 SLC4A1APQ9BWU0 796 aaKnown RBP25.31■■□□□ 1.64
CCDC130-206ENST00000587019 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.29■■□□□ 1.64
CCDC130-206ENST00000587019 C14orf37Q86TY3 774 aa25.29■■□□□ 1.64
CCDC130-206ENST00000587019 PHF23Q9BUL5 403 aaPredicted RBP25.29■■□□□ 1.64
CCDC130-206ENST00000587019 AMOTL2Q9Y2J4 779 aa25.28■■□□□ 1.64
CCDC130-206ENST00000587019 SLAIN2Q9P270 581 aa25.27■■□□□ 1.64
CCDC130-206ENST00000587019 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
CCDC130-206ENST00000587019 METP08581 1390 aa25.24■■□□□ 1.63
CCDC130-206ENST00000587019 DCCP43146 1447 aa25.23■■□□□ 1.63
CCDC130-206ENST00000587019 CADPS2Q86UW7 1296 aa25.23■■□□□ 1.63
CCDC130-206ENST00000587019 C19orf44Q9H6X5 657 aa25.23■■□□□ 1.63
CCDC130-206ENST00000587019 PPLO60437 1756 aa25.21■■□□□ 1.63
CCDC130-206ENST00000587019 SETD1AO15047 1707 aaKnown RBP25.21■■□□□ 1.63
CCDC130-206ENST00000587019 COL16A1Q07092 1604 aaPredicted RBP25.2■■□□□ 1.62
CCDC130-206ENST00000587019 ATF3P18847 181 aa25.2■■□□□ 1.62
CCDC130-206ENST00000587019 RPGRIP1LQ68CZ1 1315 aa25.18■■□□□ 1.62
CCDC130-206ENST00000587019 AHDC1Q5TGY3 1603 aaPredicted RBP25.18■■□□□ 1.62
CCDC130-206ENST00000587019 CCDC144AA2RUR9 1427 aa25.18■■□□□ 1.62
CCDC130-206ENST00000587019 VGFO15240 615 aaPredicted RBP25.17■■□□□ 1.62
CCDC130-206ENST00000587019 FOXD1Q16676 465 aa25.16■■□□□ 1.62
CCDC130-206ENST00000587019 NALCNQ8IZF0 1738 aa25.16■■□□□ 1.62
CCDC130-206ENST00000587019 ADGRL3Q9HAR2 1447 aa25.16■■□□□ 1.62
CCDC130-206ENST00000587019 PTCH1Q13635 1447 aa25.14■■□□□ 1.62
CCDC130-206ENST00000587019 JCADQ9P266 1359 aa25.14■■□□□ 1.61
CCDC130-206ENST00000587019 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
CCDC130-206ENST00000587019 MPHOSPH9Q99550 1183 aa25.12■■□□□ 1.61
CCDC130-206ENST00000587019 MST1RQ04912 1400 aa25.12■■□□□ 1.61
CCDC130-206ENST00000587019 ACIN1Q9UKV3 1341 aaKnown RBP25.12■■□□□ 1.61
CCDC130-206ENST00000587019 IFT172Q9UG01 1749 aa25.11■■□□□ 1.61
CCDC130-206ENST00000587019 ASXL1Q8IXJ9 1541 aa25.11■■□□□ 1.61
CCDC130-206ENST00000587019 SETD5Q9C0A6 1442 aa25.11■■□□□ 1.61
CCDC130-206ENST00000587019 SPATA31E1Q6ZUB1 1445 aa25.1■■□□□ 1.61
CCDC130-206ENST00000587019 SHPRHQ149N8 1683 aa25.07■■□□□ 1.6
CCDC130-206ENST00000587019 BRINP3Q76B58 766 aa25.07■■□□□ 1.6
CCDC130-206ENST00000587019 NHSL1Q5SYE7 1610 aa25.06■■□□□ 1.6
CCDC130-206ENST00000587019 ROBO2Q9HCK4 1378 aa25.05■■□□□ 1.6
CCDC130-206ENST00000587019 RGS17Q9UGC6 210 aaPredicted RBP25.05■■□□□ 1.6
CCDC130-206ENST00000587019 ANKRD30BQ9BXX2 1392 aa25.04■■□□□ 1.6
CCDC130-206ENST00000587019 RAB3GAP2Q9H2M9 1393 aa25.03■■□□□ 1.6
CCDC130-206ENST00000587019 SPATA31A6Q5VVP1 1343 aa25.01■■□□□ 1.59
CCDC130-206ENST00000587019 LRP6O75581 1613 aa25.01■■□□□ 1.59
CCDC130-206ENST00000587019 RGL3Q3MIN7 710 aa25■■□□□ 1.59
CCDC130-206ENST00000587019 ADGRF5Q8IZF2 1346 aa25■■□□□ 1.59
CCDC130-206ENST00000587019 PIK3C2GO75747 1445 aa24.98■■□□□ 1.59
CCDC130-206ENST00000587019 C1orf167Q5SNV9 1468 aa24.97■■□□□ 1.59
CCDC130-206ENST00000587019 KNDC1Q76NI1 1749 aa24.97■■□□□ 1.59
CCDC130-206ENST00000587019 CDC42BPGQ6DT37 1551 aa24.97■■□□□ 1.59
CCDC130-206ENST00000587019 TECPR2O15040 1411 aa24.95■■□□□ 1.59
CCDC130-206ENST00000587019 LAMC1P11047 1609 aa24.94■■□□□ 1.58
CCDC130-206ENST00000587019 POTEAQ6S8J7 498 aa24.93■■□□□ 1.58
CCDC130-206ENST00000587019 MYOM2P54296 1465 aa24.93■■□□□ 1.58
CCDC130-206ENST00000587019 LRPPRCP42704 1394 aaKnown RBP24.92■■□□□ 1.58
CCDC130-206ENST00000587019 MEX3CQ5U5Q3 659 aaKnown RBP24.91■■□□□ 1.58
CCDC130-206ENST00000587019 NRXN1Q9ULB1 1477 aa24.9■■□□□ 1.58
CCDC130-206ENST00000587019 DDX17Q92841 729 aaKnown RBP24.87■■□□□ 1.57
CCDC130-206ENST00000587019 LRRC59Q96AG4 307 aaKnown RBP24.87■■□□□ 1.57
CCDC130-206ENST00000587019 ABCC11Q96J66 1382 aa24.87■■□□□ 1.57
CCDC130-206ENST00000587019 PNPLA6Q8IY17 1366 aa24.86■■□□□ 1.57
CCDC130-206ENST00000587019 STK26Q9P289 416 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms