RNA–Protein interactions for RNA: ENST00000586892.1

SMARCA4-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 4

Gene SMARCA4, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-210ENST00000586892 RAB3GAP2Q9H2M9 1393 aa19.8■□□□□ 0.76
SMARCA4-210ENST00000586892 ILDR1Q86SU0 546 aaPredicted RBP19.79■□□□□ 0.76
SMARCA4-210ENST00000586892 CPS1P31327 1500 aa19.79■□□□□ 0.76
SMARCA4-210ENST00000586892 MPHOSPH9Q99550 1183 aa19.78■□□□□ 0.76
SMARCA4-210ENST00000586892 KIF1BO60333 1816 aa19.78■□□□□ 0.76
SMARCA4-210ENST00000586892 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
SMARCA4-210ENST00000586892 PLEKHG1Q9ULL1 1385 aa19.75■□□□□ 0.75
SMARCA4-210ENST00000586892 PPP1R15AO75807 674 aaPredicted RBP19.75■□□□□ 0.75
SMARCA4-210ENST00000586892 HRCP23327 699 aa19.73■□□□□ 0.75
SMARCA4-210ENST00000586892 STRCP1A6NGW2 1772 aa19.72■□□□□ 0.75
SMARCA4-210ENST00000586892 FOXD1Q16676 465 aa19.72■□□□□ 0.75
SMARCA4-210ENST00000586892 BCANQ96GW7 911 aa19.71■□□□□ 0.75
SMARCA4-210ENST00000586892 ZNF326Q5BKZ1 582 aaKnown RBP19.7■□□□□ 0.74
SMARCA4-210ENST00000586892 SLC26A8Q96RN1 970 aa19.7■□□□□ 0.74
SMARCA4-210ENST00000586892 CCDC144AA2RUR9 1427 aa19.69■□□□□ 0.74
SMARCA4-210ENST00000586892 NEXMIFQ5QGS0 1516 aa19.67■□□□□ 0.74
SMARCA4-210ENST00000586892 DIP2AQ14689 1571 aa19.67■□□□□ 0.74
SMARCA4-210ENST00000586892 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
SMARCA4-210ENST00000586892 LRRC7Q96NW7 1537 aa19.66■□□□□ 0.74
SMARCA4-210ENST00000586892 TBX22Q9Y458 520 aa19.65■□□□□ 0.74
SMARCA4-210ENST00000586892 KCNA6P17658 529 aa19.64■□□□□ 0.73
SMARCA4-210ENST00000586892 ADAMTS13Q76LX8 1427 aa19.64■□□□□ 0.73
SMARCA4-210ENST00000586892 NWD1Q149M9 1564 aa19.64■□□□□ 0.73
SMARCA4-210ENST00000586892 CHD2O14647 1828 aaKnown RBP19.63■□□□□ 0.73
SMARCA4-210ENST00000586892 SETBP1Q9Y6X0 1596 aa19.63■□□□□ 0.73
SMARCA4-210ENST00000586892 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
SMARCA4-210ENST00000586892 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
SMARCA4-210ENST00000586892 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
SMARCA4-210ENST00000586892 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
SMARCA4-210ENST00000586892 PPLO60437 1756 aa19.61■□□□□ 0.73
SMARCA4-210ENST00000586892 PIK3R4Q99570 1358 aa19.6■□□□□ 0.73
SMARCA4-210ENST00000586892 SPATA31E1Q6ZUB1 1445 aa19.59■□□□□ 0.73
SMARCA4-210ENST00000586892 UBAP1LF5GYI3 381 aa19.59■□□□□ 0.73
SMARCA4-210ENST00000586892 VGFO15240 615 aaPredicted RBP19.59■□□□□ 0.73
SMARCA4-210ENST00000586892 XIRP1Q702N8 1843 aaKnown RBP19.59■□□□□ 0.73
SMARCA4-210ENST00000586892 ANKRD30BQ9BXX2 1392 aa19.57■□□□□ 0.72
SMARCA4-210ENST00000586892 TOM1O60784 492 aa19.56■□□□□ 0.72
SMARCA4-210ENST00000586892 IFT172Q9UG01 1749 aa19.56■□□□□ 0.72
SMARCA4-210ENST00000586892 RGL3Q3MIN7 710 aa19.54■□□□□ 0.72
SMARCA4-210ENST00000586892 PROSER2Q86WR7 435 aaPredicted RBP19.54■□□□□ 0.72
SMARCA4-210ENST00000586892 TMEM94Q12767 1356 aa19.54■□□□□ 0.72
SMARCA4-210ENST00000586892 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-210ENST00000586892 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
SMARCA4-210ENST00000586892 ALKQ9UM73 1620 aa19.51■□□□□ 0.71
SMARCA4-210ENST00000586892 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
SMARCA4-210ENST00000586892 METP08581 1390 aa19.5■□□□□ 0.71
SMARCA4-210ENST00000586892 TRIM26Q12899 539 aaPredicted RBP19.5■□□□□ 0.71
SMARCA4-210ENST00000586892 AMOTL2Q9Y2J4 779 aa19.49■□□□□ 0.71
SMARCA4-210ENST00000586892 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
SMARCA4-210ENST00000586892 ADGRF5Q8IZF2 1346 aa19.47■□□□□ 0.71
SMARCA4-210ENST00000586892 MSH6P52701 1360 aa19.46■□□□□ 0.71
SMARCA4-210ENST00000586892 PIP4K2BP78356 416 aa19.46■□□□□ 0.71
SMARCA4-210ENST00000586892 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-210ENST00000586892 MYOM2P54296 1465 aa19.46■□□□□ 0.71
SMARCA4-210ENST00000586892 SCAF1Q9H7N4 1312 aaKnown RBP19.46■□□□□ 0.71
SMARCA4-210ENST00000586892 PIK3C2GO75747 1445 aa19.45■□□□□ 0.7
SMARCA4-210ENST00000586892 NRXN1Q9ULB1 1477 aa19.42■□□□□ 0.7
SMARCA4-210ENST00000586892 PRAG1Q86YV5 1406 aa19.42■□□□□ 0.7
SMARCA4-210ENST00000586892 C14orf37Q86TY3 774 aa19.41■□□□□ 0.7
SMARCA4-210ENST00000586892 PTCH1Q13635 1447 aa19.41■□□□□ 0.7
SMARCA4-210ENST00000586892 LAMC1P11047 1609 aa19.4■□□□□ 0.7
SMARCA4-210ENST00000586892 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.39■□□□□ 0.7
SMARCA4-210ENST00000586892 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
SMARCA4-210ENST00000586892 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
SMARCA4-210ENST00000586892 DCCP43146 1447 aa19.37■□□□□ 0.69
SMARCA4-210ENST00000586892 FAM135BQ49AJ0 1406 aa19.36■□□□□ 0.69
SMARCA4-210ENST00000586892 CADPS2Q86UW7 1296 aa19.36■□□□□ 0.69
SMARCA4-210ENST00000586892 ASXL1Q8IXJ9 1541 aa19.35■□□□□ 0.69
SMARCA4-210ENST00000586892 ATF3P18847 181 aa19.35■□□□□ 0.69
SMARCA4-210ENST00000586892 DCAF11Q8TEB1 546 aa19.35■□□□□ 0.69
SMARCA4-210ENST00000586892 C14orf93Q9H972 538 aaKnown RBP19.35■□□□□ 0.69
SMARCA4-210ENST00000586892 TECPR2O15040 1411 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 ADGRL3Q9HAR2 1447 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 KNDC1Q76NI1 1749 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 ROBO2Q9HCK4 1378 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 ROBO1Q9Y6N7 1651 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 HSPA1LP34931 641 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 SLAIN2Q9P270 581 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
SMARCA4-210ENST00000586892 LRPPRCP42704 1394 aaKnown RBP19.33■□□□□ 0.69
SMARCA4-210ENST00000586892 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.69
SMARCA4-210ENST00000586892 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
SMARCA4-210ENST00000586892 ABCC11Q96J66 1382 aa19.32■□□□□ 0.68
SMARCA4-210ENST00000586892 CFAP70Q5T0N1 1121 aa19.31■□□□□ 0.68
SMARCA4-210ENST00000586892 TMEM132EQ6IEE7 984 aa19.31■□□□□ 0.68
SMARCA4-210ENST00000586892 YTHDC2Q9H6S0 1430 aaKnown RBP19.31■□□□□ 0.68
SMARCA4-210ENST00000586892 STK26Q9P289 416 aa19.29■□□□□ 0.68
SMARCA4-210ENST00000586892 ADGRB1O14514 1584 aa19.27■□□□□ 0.67
SMARCA4-210ENST00000586892 MST1RQ04912 1400 aa19.25■□□□□ 0.67
SMARCA4-210ENST00000586892 SIRT1Q96EB6 747 aa19.25■□□□□ 0.67
SMARCA4-210ENST00000586892 CDC42BPGQ6DT37 1551 aa19.23■□□□□ 0.67
SMARCA4-210ENST00000586892 KIAA1210Q9ULL0 1709 aa19.23■□□□□ 0.67
SMARCA4-210ENST00000586892 SIN3AQ96ST3 1273 aa19.23■□□□□ 0.67
SMARCA4-210ENST00000586892 DLC1Q96QB1 1528 aa19.23■□□□□ 0.67
SMARCA4-210ENST00000586892 PHLPP1O60346 1717 aa19.22■□□□□ 0.67
SMARCA4-210ENST00000586892 WAPLQ7Z5K2 1190 aa19.22■□□□□ 0.67
SMARCA4-210ENST00000586892 NEUROD1Q13562 356 aa19.21■□□□□ 0.67
SMARCA4-210ENST00000586892 PLEKHH1Q9ULM0 1364 aa19.2■□□□□ 0.66
SMARCA4-210ENST00000586892 BRINP3Q76B58 766 aa19.2■□□□□ 0.66
SMARCA4-210ENST00000586892 L3MBTL2Q969R5 705 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms