RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 IQGAP3Q86VI3 1631 aa21.57■■□□□ 1.04
ATG4D-206ENST00000586863 NWD1Q149M9 1564 aa21.56■■□□□ 1.04
ATG4D-206ENST00000586863 TMEM94Q12767 1356 aa21.55■■□□□ 1.04
ATG4D-206ENST00000586863 KCNA6P17658 529 aa21.54■■□□□ 1.04
ATG4D-206ENST00000586863 PPARGC1BQ86YN6 1023 aaKnown RBP21.54■■□□□ 1.04
ATG4D-206ENST00000586863 RIMS2Q9UQ26 1411 aa21.52■■□□□ 1.04
ATG4D-206ENST00000586863 NKTRP30414 1462 aaKnown RBP21.52■■□□□ 1.03
ATG4D-206ENST00000586863 ITGAEP38570 1179 aa21.51■■□□□ 1.03
ATG4D-206ENST00000586863 PLEKHG1Q9ULL1 1385 aa21.5■■□□□ 1.03
ATG4D-206ENST00000586863 RBM33Q96EV2 1170 aaKnown RBP21.5■■□□□ 1.03
ATG4D-206ENST00000586863 BCANQ96GW7 911 aa21.49■■□□□ 1.03
ATG4D-206ENST00000586863 CHD2O14647 1828 aaKnown RBP21.49■■□□□ 1.03
ATG4D-206ENST00000586863 NUP155O75694 1391 aa21.48■■□□□ 1.03
ATG4D-206ENST00000586863 PROSER2Q86WR7 435 aaPredicted RBP21.47■■□□□ 1.03
ATG4D-206ENST00000586863 FAM135BQ49AJ0 1406 aa21.46■■□□□ 1.03
ATG4D-206ENST00000586863 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
ATG4D-206ENST00000586863 CHGAP10645 457 aaKnown RBP21.46■■□□□ 1.03
ATG4D-206ENST00000586863 ROBO1Q9Y6N7 1651 aa21.46■■□□□ 1.03
ATG4D-206ENST00000586863 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
ATG4D-206ENST00000586863 SPHKAPQ2M3C7 1700 aa21.42■■□□□ 1.02
ATG4D-206ENST00000586863 NUTM2DQ5VT03 806 aaPredicted RBP21.42■■□□□ 1.02
ATG4D-206ENST00000586863 ADAMTS13Q76LX8 1427 aa21.42■■□□□ 1.02
ATG4D-206ENST00000586863 HDGFP51858 240 aaKnown RBP21.41■■□□□ 1.02
ATG4D-206ENST00000586863 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.4■■□□□ 1.02
ATG4D-206ENST00000586863 DIP2AQ14689 1571 aa21.4■■□□□ 1.02
ATG4D-206ENST00000586863 MSH6P52701 1360 aa21.39■■□□□ 1.02
ATG4D-206ENST00000586863 TBX22Q9Y458 520 aa21.39■■□□□ 1.01
ATG4D-206ENST00000586863 RRBP1Q9P2E9 1410 aaKnown RBP21.38■■□□□ 1.01
ATG4D-206ENST00000586863 NRXN3Q9Y4C0 1643 aa21.34■■□□□ 1.01
ATG4D-206ENST00000586863 TRPM2O94759 1503 aa21.33■■□□□ 1
ATG4D-206ENST00000586863 PIK3R4Q99570 1358 aa21.33■■□□□ 1
ATG4D-206ENST00000586863 PHLPP1O60346 1717 aa21.32■■□□□ 1
ATG4D-206ENST00000586863 NAIPQ13075 1403 aa21.32■■□□□ 1
ATG4D-206ENST00000586863 CLTCL1P53675 1640 aa21.32■■□□□ 1
ATG4D-206ENST00000586863 SLAIN2Q9P270 581 aa21.31■■□□□ 1
ATG4D-206ENST00000586863 RGS17Q9UGC6 210 aaPredicted RBP21.31■■□□□ 1
ATG4D-206ENST00000586863 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.31■■□□□ 1
ATG4D-206ENST00000586863 PTPRUQ92729 1446 aa21.3■■□□□ 1
ATG4D-206ENST00000586863 NCOA3Q9Y6Q9 1424 aa21.3■■□□□ 1
ATG4D-206ENST00000586863 SETBP1Q9Y6X0 1596 aa21.3■■□□□ 1
ATG4D-206ENST00000586863 XRN1Q8IZH2 1706 aaKnown RBP21.28■■□□□ 1
ATG4D-206ENST00000586863 C14orf37Q86TY3 774 aa21.27■■□□□ 1
ATG4D-206ENST00000586863 COL16A1Q07092 1604 aaPredicted RBP21.26■□□□□ 0.99
ATG4D-206ENST00000586863 AMOTL2Q9Y2J4 779 aa21.26■□□□□ 0.99
ATG4D-206ENST00000586863 NEXMIFQ5QGS0 1516 aa21.25■□□□□ 0.99
ATG4D-206ENST00000586863 KIF1BO60333 1816 aa21.25■□□□□ 0.99
ATG4D-206ENST00000586863 ZNF326Q5BKZ1 582 aaKnown RBP21.25■□□□□ 0.99
ATG4D-206ENST00000586863 C19orf44Q9H6X5 657 aa21.23■□□□□ 0.99
ATG4D-206ENST00000586863 HFM1A2PYH4 1435 aa21.22■□□□□ 0.99
ATG4D-206ENST00000586863 JCADQ9P266 1359 aa21.22■□□□□ 0.99
ATG4D-206ENST00000586863 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
ATG4D-206ENST00000586863 AHDC1Q5TGY3 1603 aaPredicted RBP21.21■□□□□ 0.99
ATG4D-206ENST00000586863 METP08581 1390 aa21.21■□□□□ 0.99
ATG4D-206ENST00000586863 ATF3P18847 181 aa21.2■□□□□ 0.98
ATG4D-206ENST00000586863 POTEAQ6S8J7 498 aa21.18■□□□□ 0.98
ATG4D-206ENST00000586863 DCCP43146 1447 aa21.17■□□□□ 0.98
ATG4D-206ENST00000586863 TRIM52Q96A61 297 aa21.16■□□□□ 0.98
ATG4D-206ENST00000586863 SETD1AO15047 1707 aaKnown RBP21.15■□□□□ 0.98
ATG4D-206ENST00000586863 SHPRHQ149N8 1683 aa21.15■□□□□ 0.98
ATG4D-206ENST00000586863 LRP6O75581 1613 aa21.15■□□□□ 0.98
ATG4D-206ENST00000586863 NALCNQ8IZF0 1738 aa21.14■□□□□ 0.97
ATG4D-206ENST00000586863 BRINP3Q76B58 766 aa21.13■□□□□ 0.97
ATG4D-206ENST00000586863 ASXL1Q8IXJ9 1541 aa21.13■□□□□ 0.97
ATG4D-206ENST00000586863 MST1RQ04912 1400 aa21.12■□□□□ 0.97
ATG4D-206ENST00000586863 ADGRL3Q9HAR2 1447 aa21.12■□□□□ 0.97
ATG4D-206ENST00000586863 PPLO60437 1756 aa21.11■□□□□ 0.97
ATG4D-206ENST00000586863 SLC4A1APQ9BWU0 796 aaKnown RBP21.11■□□□□ 0.97
ATG4D-206ENST00000586863 NHSL1Q5SYE7 1610 aa21.11■□□□□ 0.97
ATG4D-206ENST00000586863 SPATA31A6Q5VVP1 1343 aa21.09■□□□□ 0.97
ATG4D-206ENST00000586863 PTCH1Q13635 1447 aa21.06■□□□□ 0.96
ATG4D-206ENST00000586863 FOXD1Q16676 465 aa21.06■□□□□ 0.96
ATG4D-206ENST00000586863 VGFO15240 615 aaPredicted RBP21.05■□□□□ 0.96
ATG4D-206ENST00000586863 ROBO2Q9HCK4 1378 aa21.04■□□□□ 0.96
ATG4D-206ENST00000586863 RPGRIP1LQ68CZ1 1315 aa21.04■□□□□ 0.96
ATG4D-206ENST00000586863 MEX3CQ5U5Q3 659 aaKnown RBP21.03■□□□□ 0.96
ATG4D-206ENST00000586863 PRAG1Q86YV5 1406 aa21.03■□□□□ 0.96
ATG4D-206ENST00000586863 SETD5Q9C0A6 1442 aa21.03■□□□□ 0.96
ATG4D-206ENST00000586863 DDX17Q92841 729 aaKnown RBP21.01■□□□□ 0.95
ATG4D-206ENST00000586863 C1orf167Q5SNV9 1468 aa21■□□□□ 0.95
ATG4D-206ENST00000586863 IFT172Q9UG01 1749 aa20.99■□□□□ 0.95
ATG4D-206ENST00000586863 CCDC144AA2RUR9 1427 aa20.99■□□□□ 0.95
ATG4D-206ENST00000586863 NUTM2BA6NNL0 878 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-206ENST00000586863 NUTM2EB1AL46 878 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-206ENST00000586863 NUTM2AQ8IVF1 878 aaPredicted RBP20.98■□□□□ 0.95
ATG4D-206ENST00000586863 LAMC1P11047 1609 aa20.97■□□□□ 0.95
ATG4D-206ENST00000586863 SPATA31E1Q6ZUB1 1445 aa20.97■□□□□ 0.95
ATG4D-206ENST00000586863 ZNF772Q68DY9 489 aaPredicted RBP20.96■□□□□ 0.95
ATG4D-206ENST00000586863 MPHOSPH9Q99550 1183 aa20.95■□□□□ 0.94
ATG4D-206ENST00000586863 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
ATG4D-206ENST00000586863 PNPLA6Q8IY17 1366 aa20.95■□□□□ 0.94
ATG4D-206ENST00000586863 LRRC59Q96AG4 307 aaKnown RBP20.94■□□□□ 0.94
ATG4D-206ENST00000586863 RGL3Q3MIN7 710 aa20.92■□□□□ 0.94
ATG4D-206ENST00000586863 CDC42BPGQ6DT37 1551 aa20.91■□□□□ 0.94
ATG4D-206ENST00000586863 ORAI2Q96SN7 254 aa20.91■□□□□ 0.94
ATG4D-206ENST00000586863 ANKRD30BQ9BXX2 1392 aa20.9■□□□□ 0.94
ATG4D-206ENST00000586863 AFF2P51816 1311 aa20.9■□□□□ 0.94
ATG4D-206ENST00000586863 TECPR2O15040 1411 aa20.89■□□□□ 0.94
ATG4D-206ENST00000586863 KNDC1Q76NI1 1749 aa20.89■□□□□ 0.93
ATG4D-206ENST00000586863 PIK3C2GO75747 1445 aa20.88■□□□□ 0.93
ATG4D-206ENST00000586863 SOS2Q07890 1332 aaPredicted RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms