RNA–Protein interactions for RNA: ENST00000586177.1

AP3D1-204, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 5

Gene AP3D1, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-204ENST00000586177 NPHP4O75161 1426 aaPredicted RBP24.94■■□□□ 1.58
AP3D1-204ENST00000586177 RGL3Q3MIN7 710 aa24.93■■□□□ 1.58
AP3D1-204ENST00000586177 MED14O60244 1454 aa24.92■■□□□ 1.58
AP3D1-204ENST00000586177 BCANQ96GW7 911 aa24.92■■□□□ 1.58
AP3D1-204ENST00000586177 ZFYVE9O95405 1425 aa24.92■■□□□ 1.58
AP3D1-204ENST00000586177 RPGRIP1LQ68CZ1 1315 aa24.9■■□□□ 1.58
AP3D1-204ENST00000586177 DHX57Q6P158 1386 aaKnown RBP24.9■■□□□ 1.58
AP3D1-204ENST00000586177 NEURL4Q96JN8 1562 aa24.89■■□□□ 1.58
AP3D1-204ENST00000586177 SENP3Q9H4L4 574 aaPredicted RBP24.89■■□□□ 1.58
AP3D1-204ENST00000586177 MYO5BQ9ULV0 1848 aa24.89■■□□□ 1.57
AP3D1-204ENST00000586177 KIF1BO60333 1816 aa24.88■■□□□ 1.57
AP3D1-204ENST00000586177 POLR1AO95602 1720 aaPredicted RBP24.87■■□□□ 1.57
AP3D1-204ENST00000586177 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
AP3D1-204ENST00000586177 VGFO15240 615 aaPredicted RBP24.85■■□□□ 1.57
AP3D1-204ENST00000586177 PLEKHG1Q9ULL1 1385 aa24.84■■□□□ 1.57
AP3D1-204ENST00000586177 SLC26A8Q96RN1 970 aa24.84■■□□□ 1.57
AP3D1-204ENST00000586177 IQGAP1P46940 1657 aa24.8■■□□□ 1.56
AP3D1-204ENST00000586177 SIN3AQ96ST3 1273 aa24.79■■□□□ 1.56
AP3D1-204ENST00000586177 NEXMIFQ5QGS0 1516 aa24.79■■□□□ 1.56
AP3D1-204ENST00000586177 ZNF335Q9H4Z2 1342 aaPredicted RBP24.79■■□□□ 1.56
AP3D1-204ENST00000586177 NEUROD1Q13562 356 aa24.77■■□□□ 1.56
AP3D1-204ENST00000586177 TBX22Q9Y458 520 aa24.77■■□□□ 1.56
AP3D1-204ENST00000586177 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
AP3D1-204ENST00000586177 DCAF11Q8TEB1 546 aa24.73■■□□□ 1.55
AP3D1-204ENST00000586177 KDM2AQ9Y2K7 1162 aa24.72■■□□□ 1.55
AP3D1-204ENST00000586177 ADAMTS13Q76LX8 1427 aa24.71■■□□□ 1.55
AP3D1-204ENST00000586177 KCNA6P17658 529 aa24.69■■□□□ 1.54
AP3D1-204ENST00000586177 STAC3Q96MF2 364 aa24.69■■□□□ 1.54
AP3D1-204ENST00000586177 PPLO60437 1756 aa24.67■■□□□ 1.54
AP3D1-204ENST00000586177 CERKQ8TCT0 537 aa24.67■■□□□ 1.54
AP3D1-204ENST00000586177 SETBP1Q9Y6X0 1596 aa24.66■■□□□ 1.54
AP3D1-204ENST00000586177 LTBP4Q8N2S1 1624 aa24.65■■□□□ 1.54
AP3D1-204ENST00000586177 CCER1Q8TC90 406 aaPredicted RBP24.64■■□□□ 1.54
AP3D1-204ENST00000586177 L3MBTL2Q969R5 705 aa24.64■■□□□ 1.54
AP3D1-204ENST00000586177 PIK3R4Q99570 1358 aa24.64■■□□□ 1.53
AP3D1-204ENST00000586177 DIP2AQ14689 1571 aa24.63■■□□□ 1.53
AP3D1-204ENST00000586177 METP08581 1390 aa24.62■■□□□ 1.53
AP3D1-204ENST00000586177 MYOM2P54296 1465 aa24.62■■□□□ 1.53
AP3D1-204ENST00000586177 AMOTL2Q9Y2J4 779 aa24.61■■□□□ 1.53
AP3D1-204ENST00000586177 IFT172Q9UG01 1749 aa24.61■■□□□ 1.53
AP3D1-204ENST00000586177 NRXN3Q9Y4C0 1643 aa24.61■■□□□ 1.53
AP3D1-204ENST00000586177 C14orf93Q9H972 538 aaKnown RBP24.6■■□□□ 1.53
AP3D1-204ENST00000586177 CPS1P31327 1500 aa24.6■■□□□ 1.53
AP3D1-204ENST00000586177 PIK3C2GO75747 1445 aa24.6■■□□□ 1.53
AP3D1-204ENST00000586177 CFAP70Q5T0N1 1121 aa24.59■■□□□ 1.53
AP3D1-204ENST00000586177 PROSER2Q86WR7 435 aaPredicted RBP24.59■■□□□ 1.53
AP3D1-204ENST00000586177 CLSPNQ9HAW4 1339 aa24.59■■□□□ 1.53
AP3D1-204ENST00000586177 NRXN1Q9ULB1 1477 aa24.58■■□□□ 1.53
AP3D1-204ENST00000586177 ALKQ9UM73 1620 aa24.58■■□□□ 1.53
AP3D1-204ENST00000586177 PTPRUQ92729 1446 aa24.56■■□□□ 1.52
AP3D1-204ENST00000586177 TMEM132EQ6IEE7 984 aa24.55■■□□□ 1.52
AP3D1-204ENST00000586177 TONSLQ96HA7 1378 aa24.54■■□□□ 1.52
AP3D1-204ENST00000586177 STRCP1A6NGW2 1772 aa24.53■■□□□ 1.52
AP3D1-204ENST00000586177 LRRC7Q96NW7 1537 aa24.53■■□□□ 1.52
AP3D1-204ENST00000586177 RBM33Q96EV2 1170 aaKnown RBP24.53■■□□□ 1.52
AP3D1-204ENST00000586177 STK26Q9P289 416 aa24.51■■□□□ 1.51
AP3D1-204ENST00000586177 CHD2O14647 1828 aaKnown RBP24.51■■□□□ 1.51
AP3D1-204ENST00000586177 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
AP3D1-204ENST00000586177 TMEM94Q12767 1356 aa24.5■■□□□ 1.51
AP3D1-204ENST00000586177 NKTRP30414 1462 aaKnown RBP24.5■■□□□ 1.51
AP3D1-204ENST00000586177 IQSEC2Q5JU85 1478 aa24.47■■□□□ 1.51
AP3D1-204ENST00000586177 PRAG1Q86YV5 1406 aa24.46■■□□□ 1.51
AP3D1-204ENST00000586177 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
AP3D1-204ENST00000586177 SETD1AO15047 1707 aaKnown RBP24.46■■□□□ 1.51
AP3D1-204ENST00000586177 C14orf37Q86TY3 774 aa24.45■■□□□ 1.5
AP3D1-204ENST00000586177 YTHDC2Q9H6S0 1430 aaKnown RBP24.44■■□□□ 1.5
AP3D1-204ENST00000586177 ABCC11Q96J66 1382 aa24.43■■□□□ 1.5
AP3D1-204ENST00000586177 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
AP3D1-204ENST00000586177 UBAP1LF5GYI3 381 aa24.42■■□□□ 1.5
AP3D1-204ENST00000586177 NBPF1Q3BBV0 1214 aa24.42■■□□□ 1.5
AP3D1-204ENST00000586177 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
AP3D1-204ENST00000586177 LAMC1P11047 1609 aa24.41■■□□□ 1.5
AP3D1-204ENST00000586177 NCOA3Q9Y6Q9 1424 aa24.41■■□□□ 1.5
AP3D1-204ENST00000586177 XRN1Q8IZH2 1706 aaKnown RBP24.41■■□□□ 1.5
AP3D1-204ENST00000586177 ASXL1Q8IXJ9 1541 aa24.4■■□□□ 1.5
AP3D1-204ENST00000586177 TOM1O60784 492 aa24.4■■□□□ 1.5
AP3D1-204ENST00000586177 NBPF8Q3BBV2 869 aa24.4■■□□□ 1.5
AP3D1-204ENST00000586177 WAPLQ7Z5K2 1190 aa24.39■■□□□ 1.49
AP3D1-204ENST00000586177 FBXO41Q8TF61 875 aa24.39■■□□□ 1.49
AP3D1-204ENST00000586177 SIRT1Q96EB6 747 aa24.39■■□□□ 1.49
AP3D1-204ENST00000586177 C19orf44Q9H6X5 657 aa24.39■■□□□ 1.49
AP3D1-204ENST00000586177 TRAK1Q9UPV9 953 aa24.39■■□□□ 1.49
AP3D1-204ENST00000586177 PTCH1Q13635 1447 aa24.38■■□□□ 1.49
AP3D1-204ENST00000586177 MSH6P52701 1360 aa24.38■■□□□ 1.49
AP3D1-204ENST00000586177 ADGRB1O14514 1584 aa24.37■■□□□ 1.49
AP3D1-204ENST00000586177 TECPR2O15040 1411 aa24.36■■□□□ 1.49
AP3D1-204ENST00000586177 POGKQ9P215 609 aa24.34■■□□□ 1.49
AP3D1-204ENST00000586177 ATF3P18847 181 aa24.33■■□□□ 1.49
AP3D1-204ENST00000586177 PRAM1Q96QH2 718 aa24.33■■□□□ 1.49
AP3D1-204ENST00000586177 XIRP1Q702N8 1843 aaKnown RBP24.32■■□□□ 1.48
AP3D1-204ENST00000586177 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
AP3D1-204ENST00000586177 PLEKHH1Q9ULM0 1364 aa24.31■■□□□ 1.48
AP3D1-204ENST00000586177 PIP4K2BP78356 416 aa24.31■■□□□ 1.48
AP3D1-204ENST00000586177 CADPS2Q86UW7 1296 aa24.31■■□□□ 1.48
AP3D1-204ENST00000586177 KIAA1210Q9ULL0 1709 aa24.31■■□□□ 1.48
AP3D1-204ENST00000586177 ROCK2O75116 1388 aaKnown RBP24.3■■□□□ 1.48
AP3D1-204ENST00000586177 SAFB2Q14151 953 aaKnown RBP eCLIP24.3■■□□□ 1.48
AP3D1-204ENST00000586177 SCAF1Q9H7N4 1312 aaKnown RBP24.29■■□□□ 1.48
AP3D1-204ENST00000586177 ADGRL3Q9HAR2 1447 aa24.28■■□□□ 1.48
AP3D1-204ENST00000586177 SLAIN2Q9P270 581 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms