RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 SETD5Q9C0A6 1442 aa15.53■□□□□ 0.08
SMARCA4-209ENST00000586122 KIF1BO60333 1816 aa15.53■□□□□ 0.08
SMARCA4-209ENST00000586122 PLEKHG1Q9ULL1 1385 aa15.52■□□□□ 0.08
SMARCA4-209ENST00000586122 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
SMARCA4-209ENST00000586122 CLTCL1P53675 1640 aa15.51■□□□□ 0.07
SMARCA4-209ENST00000586122 PPP1R15AO75807 674 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-209ENST00000586122 STRCP1A6NGW2 1772 aa15.5■□□□□ 0.07
SMARCA4-209ENST00000586122 DIP2AQ14689 1571 aa15.49■□□□□ 0.07
SMARCA4-209ENST00000586122 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
SMARCA4-209ENST00000586122 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
SMARCA4-209ENST00000586122 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
SMARCA4-209ENST00000586122 BCANQ96GW7 911 aa15.46■□□□□ 0.07
SMARCA4-209ENST00000586122 MPHOSPH9Q99550 1183 aa15.46■□□□□ 0.07
SMARCA4-209ENST00000586122 RAB3GAP2Q9H2M9 1393 aa15.46■□□□□ 0.07
SMARCA4-209ENST00000586122 KCNA6P17658 529 aa15.45■□□□□ 0.06
SMARCA4-209ENST00000586122 HRCP23327 699 aa15.45■□□□□ 0.06
SMARCA4-209ENST00000586122 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
SMARCA4-209ENST00000586122 PIK3R4Q99570 1358 aa15.45■□□□□ 0.06
SMARCA4-209ENST00000586122 UBAP1LF5GYI3 381 aa15.44■□□□□ 0.06
SMARCA4-209ENST00000586122 TOM1O60784 492 aa15.44■□□□□ 0.06
SMARCA4-209ENST00000586122 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-209ENST00000586122 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
SMARCA4-209ENST00000586122 CHD2O14647 1828 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-209ENST00000586122 SETBP1Q9Y6X0 1596 aa15.44■□□□□ 0.06
SMARCA4-209ENST00000586122 CCDC144AA2RUR9 1427 aa15.43■□□□□ 0.06
SMARCA4-209ENST00000586122 NEXMIFQ5QGS0 1516 aa15.43■□□□□ 0.06
SMARCA4-209ENST00000586122 ADAMTS13Q76LX8 1427 aa15.43■□□□□ 0.06
SMARCA4-209ENST00000586122 RPGRIP1LQ68CZ1 1315 aa15.43■□□□□ 0.06
SMARCA4-209ENST00000586122 XIRP1Q702N8 1843 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-209ENST00000586122 VGFO15240 615 aaPredicted RBP15.39■□□□□ 0.05
SMARCA4-209ENST00000586122 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
SMARCA4-209ENST00000586122 PPLO60437 1756 aa15.39■□□□□ 0.05
SMARCA4-209ENST00000586122 NUTM2DQ5VT03 806 aaPredicted RBP15.38■□□□□ 0.05
SMARCA4-209ENST00000586122 NCOA3Q9Y6Q9 1424 aa15.37■□□□□ 0.05
SMARCA4-209ENST00000586122 FOXD1Q16676 465 aa15.37■□□□□ 0.05
SMARCA4-209ENST00000586122 TMEM94Q12767 1356 aa15.36■□□□□ 0.05
SMARCA4-209ENST00000586122 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
SMARCA4-209ENST00000586122 SPATA31E1Q6ZUB1 1445 aa15.35■□□□□ 0.05
SMARCA4-209ENST00000586122 ANKRD30BQ9BXX2 1392 aa15.35■□□□□ 0.05
SMARCA4-209ENST00000586122 ALKQ9UM73 1620 aa15.34■□□□□ 0.05
SMARCA4-209ENST00000586122 XRN1Q8IZH2 1706 aaKnown RBP15.34■□□□□ 0.05
SMARCA4-209ENST00000586122 IFT172Q9UG01 1749 aa15.34■□□□□ 0.05
SMARCA4-209ENST00000586122 MSH6P52701 1360 aa15.32■□□□□ 0.04
SMARCA4-209ENST00000586122 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
SMARCA4-209ENST00000586122 SETD1AO15047 1707 aaKnown RBP15.31■□□□□ 0.04
SMARCA4-209ENST00000586122 PIP4K2BP78356 416 aa15.3■□□□□ 0.04
SMARCA4-209ENST00000586122 SCAF1Q9H7N4 1312 aaKnown RBP15.3■□□□□ 0.04
SMARCA4-209ENST00000586122 AMOTL2Q9Y2J4 779 aa15.3■□□□□ 0.04
SMARCA4-209ENST00000586122 PRAG1Q86YV5 1406 aa15.29■□□□□ 0.04
SMARCA4-209ENST00000586122 PTPRUQ92729 1446 aa15.29■□□□□ 0.04
SMARCA4-209ENST00000586122 METP08581 1390 aa15.28■□□□□ 0.04
SMARCA4-209ENST00000586122 FAM135BQ49AJ0 1406 aa15.27■□□□□ 0.04
SMARCA4-209ENST00000586122 RGL3Q3MIN7 710 aa15.27■□□□□ 0.04
SMARCA4-209ENST00000586122 MYOM2P54296 1465 aa15.27■□□□□ 0.03
SMARCA4-209ENST00000586122 DCCP43146 1447 aa15.26■□□□□ 0.03
SMARCA4-209ENST00000586122 PTCH1Q13635 1447 aa15.26■□□□□ 0.03
SMARCA4-209ENST00000586122 LAMC1P11047 1609 aa15.25■□□□□ 0.03
SMARCA4-209ENST00000586122 C14orf37Q86TY3 774 aa15.25■□□□□ 0.03
SMARCA4-209ENST00000586122 STAC3Q96MF2 364 aa15.25■□□□□ 0.03
SMARCA4-209ENST00000586122 C19orf44Q9H6X5 657 aa15.25■□□□□ 0.03
SMARCA4-209ENST00000586122 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.25■□□□□ 0.03
SMARCA4-209ENST00000586122 PIK3C2GO75747 1445 aa15.25■□□□□ 0.03
SMARCA4-209ENST00000586122 CADPS2Q86UW7 1296 aa15.24■□□□□ 0.03
SMARCA4-209ENST00000586122 ADGRF5Q8IZF2 1346 aa15.23■□□□□ 0.03
SMARCA4-209ENST00000586122 NRXN1Q9ULB1 1477 aa15.23■□□□□ 0.03
SMARCA4-209ENST00000586122 HSPA1LP34931 641 aa15.23■□□□□ 0.03
SMARCA4-209ENST00000586122 RBM33Q96EV2 1170 aaKnown RBP15.23■□□□□ 0.03
SMARCA4-209ENST00000586122 ROBO1Q9Y6N7 1651 aa15.22■□□□□ 0.03
SMARCA4-209ENST00000586122 ATF3P18847 181 aa15.22■□□□□ 0.03
SMARCA4-209ENST00000586122 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
SMARCA4-209ENST00000586122 SLAIN2Q9P270 581 aa15.21■□□□□ 0.03
SMARCA4-209ENST00000586122 KNDC1Q76NI1 1749 aa15.2■□□□□ 0.02
SMARCA4-209ENST00000586122 TECPR2O15040 1411 aa15.2■□□□□ 0.02
SMARCA4-209ENST00000586122 NALCNQ8IZF0 1738 aa15.18■□□□□ 0.02
SMARCA4-209ENST00000586122 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-209ENST00000586122 ABCC11Q96J66 1382 aa15.17■□□□□ 0.02
SMARCA4-209ENST00000586122 ROBO2Q9HCK4 1378 aa15.17■□□□□ 0.02
SMARCA4-209ENST00000586122 TRIM26Q12899 539 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-209ENST00000586122 C14orf93Q9H972 538 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-209ENST00000586122 ASXL1Q8IXJ9 1541 aa15.16■□□□□ 0.02
SMARCA4-209ENST00000586122 YTHDC2Q9H6S0 1430 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-209ENST00000586122 DHX57Q6P158 1386 aaKnown RBP15.14■□□□□ 0.01
SMARCA4-209ENST00000586122 SIRT1Q96EB6 747 aa15.14■□□□□ 0.01
SMARCA4-209ENST00000586122 MST1RQ04912 1400 aa15.14■□□□□ 0.01
SMARCA4-209ENST00000586122 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
SMARCA4-209ENST00000586122 AHDC1Q5TGY3 1603 aaPredicted RBP15.14■□□□□ 0.01
SMARCA4-209ENST00000586122 CDC42BPGQ6DT37 1551 aa15.13■□□□□ 0.01
SMARCA4-209ENST00000586122 DCAF11Q8TEB1 546 aa15.13■□□□□ 0.01
SMARCA4-209ENST00000586122 DISP3Q9P2K9 1392 aa15.11■□□□□ 0.01
SMARCA4-209ENST00000586122 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
SMARCA4-209ENST00000586122 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
SMARCA4-209ENST00000586122 DLC1Q96QB1 1528 aa15.11■□□□□ 0.01
SMARCA4-209ENST00000586122 KIAA1210Q9ULL0 1709 aa15.1■□□□□ 0.01
SMARCA4-209ENST00000586122 TMEM132EQ6IEE7 984 aa15.1■□□□□ 0.01
SMARCA4-209ENST00000586122 STK26Q9P289 416 aa15.1■□□□□ 0.01
SMARCA4-209ENST00000586122 ADGRB1O14514 1584 aa15.1■□□□□ 0.01
SMARCA4-209ENST00000586122 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
SMARCA4-209ENST00000586122 BRINP3Q76B58 766 aa15.09■□□□□ 0.01
SMARCA4-209ENST00000586122 NHSL1Q5SYE7 1610 aa15.09■□□□□ 0.01
SMARCA4-209ENST00000586122 KDM2AQ9Y2K7 1162 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms