RNA–Protein interactions for RNA: ENST00000585951.1

CTDP1-203, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 3

Gene CTDP1, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-203ENST00000585951 ACIN1Q9UKV3 1341 aaKnown RBP29.44■■■□□ 2.3
CTDP1-203ENST00000585951 STRCP1A6NGW2 1772 aa29.43■■■□□ 2.3
CTDP1-203ENST00000585951 HDGFP51858 240 aaKnown RBP29.42■■■□□ 2.3
CTDP1-203ENST00000585951 PLEKHG1Q9ULL1 1385 aa29.39■■■□□ 2.29
CTDP1-203ENST00000585951 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.38■■■□□ 2.29
CTDP1-203ENST00000585951 MPHOSPH9Q99550 1183 aa29.38■■■□□ 2.29
CTDP1-203ENST00000585951 KIF1BO60333 1816 aa29.38■■■□□ 2.29
CTDP1-203ENST00000585951 RAB3GAP2Q9H2M9 1393 aa29.38■■■□□ 2.29
CTDP1-203ENST00000585951 PPP1R15AO75807 674 aaPredicted RBP29.36■■■□□ 2.29
CTDP1-203ENST00000585951 FOXD1Q16676 465 aa29.33■■■□□ 2.29
CTDP1-203ENST00000585951 SLC26A8Q96RN1 970 aa29.33■■■□□ 2.29
CTDP1-203ENST00000585951 NUTM2DQ5VT03 806 aaPredicted RBP29.31■■■□□ 2.28
CTDP1-203ENST00000585951 BCANQ96GW7 911 aa29.31■■■□□ 2.28
CTDP1-203ENST00000585951 LRRC7Q96NW7 1537 aa29.3■■■□□ 2.28
CTDP1-203ENST00000585951 ZNF326Q5BKZ1 582 aaKnown RBP29.28■■■□□ 2.28
CTDP1-203ENST00000585951 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
CTDP1-203ENST00000585951 NEXMIFQ5QGS0 1516 aa29.25■■■□□ 2.27
CTDP1-203ENST00000585951 KCNA6P17658 529 aa29.25■■■□□ 2.27
CTDP1-203ENST00000585951 HRCP23327 699 aa29.25■■■□□ 2.27
CTDP1-203ENST00000585951 ADAMTS13Q76LX8 1427 aa29.25■■■□□ 2.27
CTDP1-203ENST00000585951 DIP2AQ14689 1571 aa29.24■■■□□ 2.27
CTDP1-203ENST00000585951 NWD1Q149M9 1564 aa29.24■■■□□ 2.27
CTDP1-203ENST00000585951 TBX22Q9Y458 520 aa29.24■■■□□ 2.27
CTDP1-203ENST00000585951 CHD2O14647 1828 aaKnown RBP29.23■■■□□ 2.27
CTDP1-203ENST00000585951 UBAP1LF5GYI3 381 aa29.23■■■□□ 2.27
CTDP1-203ENST00000585951 CCDC144AA2RUR9 1427 aa29.22■■■□□ 2.27
CTDP1-203ENST00000585951 XIRP1Q702N8 1843 aaKnown RBP29.21■■■□□ 2.27
CTDP1-203ENST00000585951 SETBP1Q9Y6X0 1596 aa29.2■■■□□ 2.26
CTDP1-203ENST00000585951 NRXN3Q9Y4C0 1643 aa29.2■■■□□ 2.26
CTDP1-203ENST00000585951 NKTRP30414 1462 aaKnown RBP29.18■■■□□ 2.26
CTDP1-203ENST00000585951 PIK3R4Q99570 1358 aa29.16■■■□□ 2.26
CTDP1-203ENST00000585951 RPGRIP1LQ68CZ1 1315 aa29.16■■■□□ 2.26
CTDP1-203ENST00000585951 TOM1O60784 492 aa29.15■■■□□ 2.26
CTDP1-203ENST00000585951 PPLO60437 1756 aa29.15■■■□□ 2.26
CTDP1-203ENST00000585951 ALKQ9UM73 1620 aa29.13■■■□□ 2.25
CTDP1-203ENST00000585951 SPATA31E1Q6ZUB1 1445 aa29.13■■■□□ 2.25
CTDP1-203ENST00000585951 TMEM94Q12767 1356 aa29.12■■■□□ 2.25
CTDP1-203ENST00000585951 VGFO15240 615 aaPredicted RBP29.11■■■□□ 2.25
CTDP1-203ENST00000585951 PROSER2Q86WR7 435 aaPredicted RBP29.1■■■□□ 2.25
CTDP1-203ENST00000585951 IFT172Q9UG01 1749 aa29.06■■■□□ 2.24
CTDP1-203ENST00000585951 PTPRUQ92729 1446 aa29.06■■■□□ 2.24
CTDP1-203ENST00000585951 ANKRD30BQ9BXX2 1392 aa29.05■■■□□ 2.24
CTDP1-203ENST00000585951 RGL3Q3MIN7 710 aa29.05■■■□□ 2.24
CTDP1-203ENST00000585951 METP08581 1390 aa29.04■■■□□ 2.24
CTDP1-203ENST00000585951 PIP4K2BP78356 416 aa29.04■■■□□ 2.24
CTDP1-203ENST00000585951 RBM33Q96EV2 1170 aaKnown RBP29.04■■■□□ 2.24
CTDP1-203ENST00000585951 AMOTL2Q9Y2J4 779 aa29.03■■■□□ 2.24
CTDP1-203ENST00000585951 SETD1AO15047 1707 aaKnown RBP29.03■■■□□ 2.24
CTDP1-203ENST00000585951 XRN1Q8IZH2 1706 aaKnown RBP29.03■■■□□ 2.24
CTDP1-203ENST00000585951 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
CTDP1-203ENST00000585951 NCOA3Q9Y6Q9 1424 aa29■■■□□ 2.23
CTDP1-203ENST00000585951 ADGRF5Q8IZF2 1346 aa28.96■■■□□ 2.23
CTDP1-203ENST00000585951 MSH6P52701 1360 aa28.96■■■□□ 2.23
CTDP1-203ENST00000585951 PIK3C2GO75747 1445 aa28.9■■■□□ 2.22
CTDP1-203ENST00000585951 HSPA1LP34931 641 aa28.89■■■□□ 2.22
CTDP1-203ENST00000585951 MYOM2P54296 1465 aa28.89■■■□□ 2.22
CTDP1-203ENST00000585951 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.88■■■□□ 2.21
CTDP1-203ENST00000585951 PRAG1Q86YV5 1406 aa28.87■■■□□ 2.21
CTDP1-203ENST00000585951 NRXN1Q9ULB1 1477 aa28.87■■■□□ 2.21
CTDP1-203ENST00000585951 C14orf37Q86TY3 774 aa28.87■■■□□ 2.21
CTDP1-203ENST00000585951 C19orf44Q9H6X5 657 aa28.87■■■□□ 2.21
CTDP1-203ENST00000585951 FAM135BQ49AJ0 1406 aa28.86■■■□□ 2.21
CTDP1-203ENST00000585951 PTCH1Q13635 1447 aa28.86■■■□□ 2.21
CTDP1-203ENST00000585951 TRIM26Q12899 539 aaPredicted RBP28.83■■■□□ 2.21
CTDP1-203ENST00000585951 ROBO1Q9Y6N7 1651 aa28.82■■■□□ 2.2
CTDP1-203ENST00000585951 CADPS2Q86UW7 1296 aa28.81■■■□□ 2.2
CTDP1-203ENST00000585951 SLAIN2Q9P270 581 aa28.81■■■□□ 2.2
CTDP1-203ENST00000585951 ASXL1Q8IXJ9 1541 aa28.8■■■□□ 2.2
CTDP1-203ENST00000585951 DCCP43146 1447 aa28.8■■■□□ 2.2
CTDP1-203ENST00000585951 ROBO2Q9HCK4 1378 aa28.8■■■□□ 2.2
CTDP1-203ENST00000585951 LAMC1P11047 1609 aa28.79■■■□□ 2.2
CTDP1-203ENST00000585951 ATF3P18847 181 aa28.78■■■□□ 2.2
CTDP1-203ENST00000585951 C14orf93Q9H972 538 aaKnown RBP28.78■■■□□ 2.2
CTDP1-203ENST00000585951 ADGRL3Q9HAR2 1447 aa28.77■■■□□ 2.2
CTDP1-203ENST00000585951 NALCNQ8IZF0 1738 aa28.77■■■□□ 2.2
CTDP1-203ENST00000585951 STAC3Q96MF2 364 aa28.75■■■□□ 2.19
CTDP1-203ENST00000585951 TECPR2O15040 1411 aa28.75■■■□□ 2.19
CTDP1-203ENST00000585951 LRPPRCP42704 1394 aaKnown RBP28.75■■■□□ 2.19
CTDP1-203ENST00000585951 DHX57Q6P158 1386 aaKnown RBP28.75■■■□□ 2.19
CTDP1-203ENST00000585951 KNDC1Q76NI1 1749 aa28.74■■■□□ 2.19
CTDP1-203ENST00000585951 TMEM132EQ6IEE7 984 aa28.74■■■□□ 2.19
CTDP1-203ENST00000585951 DCAF11Q8TEB1 546 aa28.74■■■□□ 2.19
CTDP1-203ENST00000585951 CFAP70Q5T0N1 1121 aa28.73■■■□□ 2.19
CTDP1-203ENST00000585951 ABCC11Q96J66 1382 aa28.73■■■□□ 2.19
CTDP1-203ENST00000585951 YTHDC2Q9H6S0 1430 aaKnown RBP28.7■■■□□ 2.19
CTDP1-203ENST00000585951 STK26Q9P289 416 aa28.7■■■□□ 2.18
CTDP1-203ENST00000585951 KDM2AQ9Y2K7 1162 aa28.7■■■□□ 2.18
CTDP1-203ENST00000585951 MST1RQ04912 1400 aa28.68■■■□□ 2.18
CTDP1-203ENST00000585951 ADGRB1O14514 1584 aa28.64■■■□□ 2.18
CTDP1-203ENST00000585951 PHLPP1O60346 1717 aa28.63■■■□□ 2.17
CTDP1-203ENST00000585951 BRINP3Q76B58 766 aa28.62■■■□□ 2.17
CTDP1-203ENST00000585951 WAPLQ7Z5K2 1190 aa28.62■■■□□ 2.17
CTDP1-203ENST00000585951 SIRT1Q96EB6 747 aa28.62■■■□□ 2.17
CTDP1-203ENST00000585951 PLEKHH1Q9ULM0 1364 aa28.61■■■□□ 2.17
CTDP1-203ENST00000585951 AHDC1Q5TGY3 1603 aaPredicted RBP28.6■■■□□ 2.17
CTDP1-203ENST00000585951 CDC42BPGQ6DT37 1551 aa28.59■■■□□ 2.17
CTDP1-203ENST00000585951 SIN3AQ96ST3 1273 aa28.58■■■□□ 2.17
CTDP1-203ENST00000585951 DISP3Q9P2K9 1392 aa28.58■■■□□ 2.17
CTDP1-203ENST00000585951 DLC1Q96QB1 1528 aa28.58■■■□□ 2.17
CTDP1-203ENST00000585951 COL16A1Q07092 1604 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms