RNA–Protein interactions for RNA: ENST00000585900.1

HMG20B-216, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-216ENST00000585900 RIMS2Q9UQ26 1411 aa27.5■■□□□ 1.99
HMG20B-216ENST00000585900 SLC26A8Q96RN1 970 aa27.5■■□□□ 1.99
HMG20B-216ENST00000585900 PLEKHG1Q9ULL1 1385 aa27.48■■□□□ 1.99
HMG20B-216ENST00000585900 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.47■■□□□ 1.99
HMG20B-216ENST00000585900 MYO5BQ9ULV0 1848 aa27.46■■□□□ 1.99
HMG20B-216ENST00000585900 KCNA6P17658 529 aa27.46■■□□□ 1.99
HMG20B-216ENST00000585900 NAIPQ13075 1403 aa27.46■■□□□ 1.99
HMG20B-216ENST00000585900 HSPA1LP34931 641 aa27.44■■□□□ 1.98
HMG20B-216ENST00000585900 ALKQ9UM73 1620 aa27.43■■□□□ 1.98
HMG20B-216ENST00000585900 NKTRP30414 1462 aaKnown RBP27.42■■□□□ 1.98
HMG20B-216ENST00000585900 HFM1A2PYH4 1435 aa27.41■■□□□ 1.98
HMG20B-216ENST00000585900 TMEM94Q12767 1356 aa27.4■■□□□ 1.98
HMG20B-216ENST00000585900 SENP3Q9H4L4 574 aaPredicted RBP27.4■■□□□ 1.98
HMG20B-216ENST00000585900 SPHKAPQ2M3C7 1700 aa27.4■■□□□ 1.98
HMG20B-216ENST00000585900 NWD1Q149M9 1564 aa27.39■■□□□ 1.98
HMG20B-216ENST00000585900 PROSER2Q86WR7 435 aaPredicted RBP27.38■■□□□ 1.97
HMG20B-216ENST00000585900 XIRP1Q702N8 1843 aaKnown RBP27.35■■□□□ 1.97
HMG20B-216ENST00000585900 NUTM2DQ5VT03 806 aaPredicted RBP27.35■■□□□ 1.97
HMG20B-216ENST00000585900 TRIM52Q96A61 297 aa27.35■■□□□ 1.97
HMG20B-216ENST00000585900 DIP2AQ14689 1571 aa27.34■■□□□ 1.97
HMG20B-216ENST00000585900 TBX22Q9Y458 520 aa27.33■■□□□ 1.97
HMG20B-216ENST00000585900 TRPM2O94759 1503 aa27.31■■□□□ 1.96
HMG20B-216ENST00000585900 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
HMG20B-216ENST00000585900 MSH6P52701 1360 aa27.29■■□□□ 1.96
HMG20B-216ENST00000585900 ADAMTS13Q76LX8 1427 aa27.29■■□□□ 1.96
HMG20B-216ENST00000585900 PIK3R4Q99570 1358 aa27.27■■□□□ 1.96
HMG20B-216ENST00000585900 RBM33Q96EV2 1170 aaKnown RBP27.27■■□□□ 1.96
HMG20B-216ENST00000585900 CHD2O14647 1828 aaKnown RBP27.27■■□□□ 1.96
HMG20B-216ENST00000585900 SLC4A1APQ9BWU0 796 aaKnown RBP27.26■■□□□ 1.95
HMG20B-216ENST00000585900 CLTCL1P53675 1640 aa27.26■■□□□ 1.95
HMG20B-216ENST00000585900 FAM135BQ49AJ0 1406 aa27.24■■□□□ 1.95
HMG20B-216ENST00000585900 MED1Q15648 1581 aaPredicted RBP27.23■■□□□ 1.95
HMG20B-216ENST00000585900 ILDR2Q71H61 639 aa27.23■■□□□ 1.95
HMG20B-216ENST00000585900 C14orf37Q86TY3 774 aa27.21■■□□□ 1.95
HMG20B-216ENST00000585900 NCOA3Q9Y6Q9 1424 aa27.2■■□□□ 1.94
HMG20B-216ENST00000585900 SETBP1Q9Y6X0 1596 aa27.19■■□□□ 1.94
HMG20B-216ENST00000585900 KIF1BO60333 1816 aa27.18■■□□□ 1.94
HMG20B-216ENST00000585900 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
HMG20B-216ENST00000585900 ROBO1Q9Y6N7 1651 aa27.15■■□□□ 1.94
HMG20B-216ENST00000585900 AMOTL2Q9Y2J4 779 aa27.15■■□□□ 1.94
HMG20B-216ENST00000585900 NRXN3Q9Y4C0 1643 aa27.15■■□□□ 1.94
HMG20B-216ENST00000585900 PHF23Q9BUL5 403 aaPredicted RBP27.13■■□□□ 1.93
HMG20B-216ENST00000585900 SLAIN2Q9P270 581 aa27.13■■□□□ 1.93
HMG20B-216ENST00000585900 PTPRUQ92729 1446 aa27.11■■□□□ 1.93
HMG20B-216ENST00000585900 ACIN1Q9UKV3 1341 aaKnown RBP27.1■■□□□ 1.93
HMG20B-216ENST00000585900 VGFO15240 615 aaPredicted RBP27.09■■□□□ 1.93
HMG20B-216ENST00000585900 ATF3P18847 181 aa27.09■■□□□ 1.93
HMG20B-216ENST00000585900 CADPS2Q86UW7 1296 aa27.09■■□□□ 1.93
HMG20B-216ENST00000585900 C19orf44Q9H6X5 657 aa27.09■■□□□ 1.93
HMG20B-216ENST00000585900 XRN1Q8IZH2 1706 aaKnown RBP27.08■■□□□ 1.93
HMG20B-216ENST00000585900 SOCS7O14512 581 aa27.08■■□□□ 1.93
HMG20B-216ENST00000585900 RPGRIP1LQ68CZ1 1315 aa27.08■■□□□ 1.93
HMG20B-216ENST00000585900 CCDC144AA2RUR9 1427 aa27.07■■□□□ 1.92
HMG20B-216ENST00000585900 METP08581 1390 aa27.06■■□□□ 1.92
HMG20B-216ENST00000585900 FOXD1Q16676 465 aa27.05■■□□□ 1.92
HMG20B-216ENST00000585900 MPHOSPH9Q99550 1183 aa27.05■■□□□ 1.92
HMG20B-216ENST00000585900 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.04■■□□□ 1.92
HMG20B-216ENST00000585900 DCCP43146 1447 aa27.03■■□□□ 1.92
HMG20B-216ENST00000585900 SETD5Q9C0A6 1442 aa27.02■■□□□ 1.92
HMG20B-216ENST00000585900 PHLPP1O60346 1717 aa26.99■■□□□ 1.91
HMG20B-216ENST00000585900 PPLO60437 1756 aa26.97■■□□□ 1.91
HMG20B-216ENST00000585900 PTCH1Q13635 1447 aa26.94■■□□□ 1.9
HMG20B-216ENST00000585900 ADGRL3Q9HAR2 1447 aa26.94■■□□□ 1.9
HMG20B-216ENST00000585900 JCADQ9P266 1359 aa26.94■■□□□ 1.9
HMG20B-216ENST00000585900 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
HMG20B-216ENST00000585900 SPATA31E1Q6ZUB1 1445 aa26.91■■□□□ 1.9
HMG20B-216ENST00000585900 SETD1AO15047 1707 aaKnown RBP26.91■■□□□ 1.9
HMG20B-216ENST00000585900 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
HMG20B-216ENST00000585900 RAB3GAP2Q9H2M9 1393 aa26.91■■□□□ 1.9
HMG20B-216ENST00000585900 COL16A1Q07092 1604 aaPredicted RBP26.9■■□□□ 1.9
HMG20B-216ENST00000585900 AHDC1Q5TGY3 1603 aaPredicted RBP26.9■■□□□ 1.9
HMG20B-216ENST00000585900 BRINP3Q76B58 766 aa26.88■■□□□ 1.89
HMG20B-216ENST00000585900 MST1RQ04912 1400 aa26.88■■□□□ 1.89
HMG20B-216ENST00000585900 PRAG1Q86YV5 1406 aa26.88■■□□□ 1.89
HMG20B-216ENST00000585900 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
HMG20B-216ENST00000585900 ASXL1Q8IXJ9 1541 aa26.86■■□□□ 1.89
HMG20B-216ENST00000585900 ROBO2Q9HCK4 1378 aa26.85■■□□□ 1.89
HMG20B-216ENST00000585900 ADGRF5Q8IZF2 1346 aa26.85■■□□□ 1.89
HMG20B-216ENST00000585900 IFT172Q9UG01 1749 aa26.82■■□□□ 1.88
HMG20B-216ENST00000585900 SPATA31A6Q5VVP1 1343 aa26.82■■□□□ 1.88
HMG20B-216ENST00000585900 PIK3C2GO75747 1445 aa26.79■■□□□ 1.88
HMG20B-216ENST00000585900 RGS17Q9UGC6 210 aaPredicted RBP26.78■■□□□ 1.88
HMG20B-216ENST00000585900 SHPRHQ149N8 1683 aa26.77■■□□□ 1.88
HMG20B-216ENST00000585900 C1orf167Q5SNV9 1468 aa26.76■■□□□ 1.87
HMG20B-216ENST00000585900 MEX3CQ5U5Q3 659 aaKnown RBP26.76■■□□□ 1.87
HMG20B-216ENST00000585900 NHSL1Q5SYE7 1610 aa26.75■■□□□ 1.87
HMG20B-216ENST00000585900 LRPPRCP42704 1394 aaKnown RBP26.74■■□□□ 1.87
HMG20B-216ENST00000585900 STK26Q9P289 416 aa26.74■■□□□ 1.87
HMG20B-216ENST00000585900 TECPR2O15040 1411 aa26.73■■□□□ 1.87
HMG20B-216ENST00000585900 MYOM2P54296 1465 aa26.73■■□□□ 1.87
HMG20B-216ENST00000585900 HRCP23327 699 aa26.71■■□□□ 1.87
HMG20B-216ENST00000585900 LRRC59Q96AG4 307 aaKnown RBP26.71■■□□□ 1.87
HMG20B-216ENST00000585900 LRP6O75581 1613 aa26.71■■□□□ 1.87
HMG20B-216ENST00000585900 CDC42BPGQ6DT37 1551 aa26.71■■□□□ 1.87
HMG20B-216ENST00000585900 ABCC11Q96J66 1382 aa26.7■■□□□ 1.86
HMG20B-216ENST00000585900 TMEM132EQ6IEE7 984 aa26.69■■□□□ 1.86
HMG20B-216ENST00000585900 LAMC1P11047 1609 aa26.68■■□□□ 1.86
HMG20B-216ENST00000585900 NRXN1Q9ULB1 1477 aa26.68■■□□□ 1.86
HMG20B-216ENST00000585900 KNDC1Q76NI1 1749 aa26.68■■□□□ 1.86
HMG20B-216ENST00000585900 YTHDC2Q9H6S0 1430 aaKnown RBP26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms