RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 PPLO60437 1756 aa13.02□□□□□ -0.33
ATG4D-202ENST00000585437 NEXMIFQ5QGS0 1516 aa13.01□□□□□ -0.33
ATG4D-202ENST00000585437 SETD1AO15047 1707 aaKnown RBP13□□□□□ -0.33
ATG4D-202ENST00000585437 ALKQ9UM73 1620 aa13□□□□□ -0.33
ATG4D-202ENST00000585437 RIMS2Q9UQ26 1411 aa13□□□□□ -0.33
ATG4D-202ENST00000585437 SETBP1Q9Y6X0 1596 aa12.99□□□□□ -0.33
ATG4D-202ENST00000585437 LRRC7Q96NW7 1537 aa12.99□□□□□ -0.33
ATG4D-202ENST00000585437 PLEKHG1Q9ULL1 1385 aa12.99□□□□□ -0.33
ATG4D-202ENST00000585437 TXNDC2Q86VQ3 553 aa12.99□□□□□ -0.33
ATG4D-202ENST00000585437 SETD5Q9C0A6 1442 aa12.98□□□□□ -0.33
ATG4D-202ENST00000585437 STAG3Q9UJ98 1225 aa12.98□□□□□ -0.33
ATG4D-202ENST00000585437 EID1Q9Y6B2 187 aa12.98□□□□□ -0.33
ATG4D-202ENST00000585437 NKTRP30414 1462 aaKnown RBP12.97□□□□□ -0.33
ATG4D-202ENST00000585437 XRN1Q8IZH2 1706 aaKnown RBP12.96□□□□□ -0.33
ATG4D-202ENST00000585437 ADAMTS13Q76LX8 1427 aa12.96□□□□□ -0.34
ATG4D-202ENST00000585437 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
ATG4D-202ENST00000585437 RAB3GAP2Q9H2M9 1393 aa12.94□□□□□ -0.34
ATG4D-202ENST00000585437 TRIM52Q96A61 297 aa12.93□□□□□ -0.34
ATG4D-202ENST00000585437 SLC4A1APQ9BWU0 796 aaKnown RBP12.93□□□□□ -0.34
ATG4D-202ENST00000585437 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
ATG4D-202ENST00000585437 SPATA31E1Q6ZUB1 1445 aa12.9□□□□□ -0.34
ATG4D-202ENST00000585437 PIK3R4Q99570 1358 aa12.9□□□□□ -0.34
ATG4D-202ENST00000585437 HDGFP51858 240 aaKnown RBP12.89□□□□□ -0.35
ATG4D-202ENST00000585437 MPHOSPH9Q99550 1183 aa12.89□□□□□ -0.35
ATG4D-202ENST00000585437 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
ATG4D-202ENST00000585437 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
ATG4D-202ENST00000585437 SLC26A8Q96RN1 970 aa12.88□□□□□ -0.35
ATG4D-202ENST00000585437 PPP1R15AO75807 674 aaPredicted RBP12.87□□□□□ -0.35
ATG4D-202ENST00000585437 KCNA6P17658 529 aa12.87□□□□□ -0.35
ATG4D-202ENST00000585437 TBX22Q9Y458 520 aa12.87□□□□□ -0.35
ATG4D-202ENST00000585437 NALCNQ8IZF0 1738 aa12.86□□□□□ -0.35
ATG4D-202ENST00000585437 HRCP23327 699 aa12.86□□□□□ -0.35
ATG4D-202ENST00000585437 FOXD1Q16676 465 aa12.86□□□□□ -0.35
ATG4D-202ENST00000585437 LAMC1P11047 1609 aa12.86□□□□□ -0.35
ATG4D-202ENST00000585437 PRAG1Q86YV5 1406 aa12.86□□□□□ -0.35
ATG4D-202ENST00000585437 PTPRUQ92729 1446 aa12.86□□□□□ -0.35
ATG4D-202ENST00000585437 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
ATG4D-202ENST00000585437 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.85□□□□□ -0.35
ATG4D-202ENST00000585437 TMEM94Q12767 1356 aa12.84□□□□□ -0.35
ATG4D-202ENST00000585437 NCOA3Q9Y6Q9 1424 aa12.84□□□□□ -0.35
ATG4D-202ENST00000585437 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
ATG4D-202ENST00000585437 NUTM2DQ5VT03 806 aaPredicted RBP12.83□□□□□ -0.36
ATG4D-202ENST00000585437 MYOM2P54296 1465 aa12.83□□□□□ -0.36
ATG4D-202ENST00000585437 NRXN1Q9ULB1 1477 aa12.83□□□□□ -0.36
ATG4D-202ENST00000585437 RPGRIP1LQ68CZ1 1315 aa12.83□□□□□ -0.36
ATG4D-202ENST00000585437 ROBO1Q9Y6N7 1651 aa12.83□□□□□ -0.36
ATG4D-202ENST00000585437 ASXL1Q8IXJ9 1541 aa12.83□□□□□ -0.36
ATG4D-202ENST00000585437 ZNF326Q5BKZ1 582 aaKnown RBP12.82□□□□□ -0.36
ATG4D-202ENST00000585437 ANKRD30BQ9BXX2 1392 aa12.81□□□□□ -0.36
ATG4D-202ENST00000585437 PIK3C2GO75747 1445 aa12.81□□□□□ -0.36
ATG4D-202ENST00000585437 METP08581 1390 aa12.81□□□□□ -0.36
ATG4D-202ENST00000585437 TOM1O60784 492 aa12.8□□□□□ -0.36
ATG4D-202ENST00000585437 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
ATG4D-202ENST00000585437 BCANQ96GW7 911 aa12.79□□□□□ -0.36
ATG4D-202ENST00000585437 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-202ENST00000585437 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
ATG4D-202ENST00000585437 DCCP43146 1447 aa12.78□□□□□ -0.36
ATG4D-202ENST00000585437 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
ATG4D-202ENST00000585437 MSH6P52701 1360 aa12.76□□□□□ -0.37
ATG4D-202ENST00000585437 TECPR2O15040 1411 aa12.76□□□□□ -0.37
ATG4D-202ENST00000585437 FAM135BQ49AJ0 1406 aa12.76□□□□□ -0.37
ATG4D-202ENST00000585437 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
ATG4D-202ENST00000585437 NHSL1Q5SYE7 1610 aa12.75□□□□□ -0.37
ATG4D-202ENST00000585437 ADGRL3Q9HAR2 1447 aa12.75□□□□□ -0.37
ATG4D-202ENST00000585437 AMOTL2Q9Y2J4 779 aa12.75□□□□□ -0.37
ATG4D-202ENST00000585437 KIAA1210Q9ULL0 1709 aa12.74□□□□□ -0.37
ATG4D-202ENST00000585437 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
ATG4D-202ENST00000585437 CDC42BPGQ6DT37 1551 aa12.74□□□□□ -0.37
ATG4D-202ENST00000585437 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
ATG4D-202ENST00000585437 AHDC1Q5TGY3 1603 aaPredicted RBP12.73□□□□□ -0.37
ATG4D-202ENST00000585437 RBM33Q96EV2 1170 aaKnown RBP12.73□□□□□ -0.37
ATG4D-202ENST00000585437 ADGRB1O14514 1584 aa12.73□□□□□ -0.37
ATG4D-202ENST00000585437 PIP4K2BP78356 416 aa12.72□□□□□ -0.37
ATG4D-202ENST00000585437 MED1Q15648 1581 aaPredicted RBP12.72□□□□□ -0.37
ATG4D-202ENST00000585437 ROBO2Q9HCK4 1378 aa12.71□□□□□ -0.37
ATG4D-202ENST00000585437 HSPA1LP34931 641 aa12.71□□□□□ -0.37
ATG4D-202ENST00000585437 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
ATG4D-202ENST00000585437 RGL3Q3MIN7 710 aa12.71□□□□□ -0.37
ATG4D-202ENST00000585437 FMN2Q9NZ56 1722 aa12.71□□□□□ -0.38
ATG4D-202ENST00000585437 SCAF1Q9H7N4 1312 aaKnown RBP12.7□□□□□ -0.38
ATG4D-202ENST00000585437 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
ATG4D-202ENST00000585437 MST1RQ04912 1400 aa12.7□□□□□ -0.38
ATG4D-202ENST00000585437 DLC1Q96QB1 1528 aa12.69□□□□□ -0.38
ATG4D-202ENST00000585437 SHPRHQ149N8 1683 aa12.69□□□□□ -0.38
ATG4D-202ENST00000585437 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
ATG4D-202ENST00000585437 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
ATG4D-202ENST00000585437 C19orf44Q9H6X5 657 aa12.68□□□□□ -0.38
ATG4D-202ENST00000585437 YTHDC2Q9H6S0 1430 aaKnown RBP12.68□□□□□ -0.38
ATG4D-202ENST00000585437 ADGRB2O60241 1585 aa12.68□□□□□ -0.38
ATG4D-202ENST00000585437 PCGF6Q9BYE7 350 aa12.67□□□□□ -0.38
ATG4D-202ENST00000585437 ABCC11Q96J66 1382 aa12.67□□□□□ -0.38
ATG4D-202ENST00000585437 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
ATG4D-202ENST00000585437 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
ATG4D-202ENST00000585437 RGPD8O14715 1765 aaPredicted RBP12.66□□□□□ -0.38
ATG4D-202ENST00000585437 C14orf93Q9H972 538 aaKnown RBP12.65□□□□□ -0.38
ATG4D-202ENST00000585437 TRPM1Q7Z4N2 1603 aa12.64□□□□□ -0.39
ATG4D-202ENST00000585437 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
ATG4D-202ENST00000585437 C14orf37Q86TY3 774 aa12.63□□□□□ -0.39
ATG4D-202ENST00000585437 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
ATG4D-202ENST00000585437 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms