RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 ANKRD30BQ9BXX2 1392 aa19.69■□□□□ 0.74
CHAF1A-202ENST00000585371 DHX57Q6P158 1386 aaKnown RBP19.68■□□□□ 0.74
CHAF1A-202ENST00000585371 SOCS7O14512 581 aa19.67■□□□□ 0.74
CHAF1A-202ENST00000585371 TOM1O60784 492 aa19.67■□□□□ 0.74
CHAF1A-202ENST00000585371 ARHGAP23Q9P227 1491 aa19.65■□□□□ 0.74
CHAF1A-202ENST00000585371 SLIT1O75093 1534 aa19.64■□□□□ 0.73
CHAF1A-202ENST00000585371 SCAF1Q9H7N4 1312 aaKnown RBP19.62■□□□□ 0.73
CHAF1A-202ENST00000585371 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
CHAF1A-202ENST00000585371 PIP4K2BP78356 416 aa19.6■□□□□ 0.73
CHAF1A-202ENST00000585371 SPATA31E1Q6ZUB1 1445 aa19.59■□□□□ 0.73
CHAF1A-202ENST00000585371 TMEM2Q9UHN6 1383 aa19.59■□□□□ 0.73
CHAF1A-202ENST00000585371 SCAF11Q99590 1463 aaKnown RBP19.59■□□□□ 0.73
CHAF1A-202ENST00000585371 ZFYVE9O95405 1425 aa19.59■□□□□ 0.73
CHAF1A-202ENST00000585371 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
CHAF1A-202ENST00000585371 IFT172Q9UG01 1749 aa19.57■□□□□ 0.72
CHAF1A-202ENST00000585371 HSPA1LP34931 641 aa19.57■□□□□ 0.72
CHAF1A-202ENST00000585371 PPLO60437 1756 aa19.57■□□□□ 0.72
CHAF1A-202ENST00000585371 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
CHAF1A-202ENST00000585371 STAG3Q9UJ98 1225 aa19.56■□□□□ 0.72
CHAF1A-202ENST00000585371 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
CHAF1A-202ENST00000585371 LTKP29376 864 aa19.55■□□□□ 0.72
CHAF1A-202ENST00000585371 LRRC7Q96NW7 1537 aa19.55■□□□□ 0.72
CHAF1A-202ENST00000585371 RIMS2Q9UQ26 1411 aa19.54■□□□□ 0.72
CHAF1A-202ENST00000585371 ALKQ9UM73 1620 aa19.54■□□□□ 0.72
CHAF1A-202ENST00000585371 TXNDC2Q86VQ3 553 aa19.52■□□□□ 0.72
CHAF1A-202ENST00000585371 EID1Q9Y6B2 187 aa19.52■□□□□ 0.72
CHAF1A-202ENST00000585371 MED1Q15648 1581 aaPredicted RBP19.52■□□□□ 0.71
CHAF1A-202ENST00000585371 NRXN3Q9Y4C0 1643 aa19.48■□□□□ 0.71
CHAF1A-202ENST00000585371 SIN3AQ96ST3 1273 aa19.48■□□□□ 0.71
CHAF1A-202ENST00000585371 RPGRIP1LQ68CZ1 1315 aa19.46■□□□□ 0.71
CHAF1A-202ENST00000585371 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
CHAF1A-202ENST00000585371 ZNF326Q5BKZ1 582 aaKnown RBP19.45■□□□□ 0.7
CHAF1A-202ENST00000585371 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
CHAF1A-202ENST00000585371 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
CHAF1A-202ENST00000585371 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHAF1A-202ENST00000585371 XIRP1Q702N8 1843 aaKnown RBP19.44■□□□□ 0.7
CHAF1A-202ENST00000585371 SETD1AO15047 1707 aaKnown RBP19.43■□□□□ 0.7
CHAF1A-202ENST00000585371 SETBP1Q9Y6X0 1596 aa19.43■□□□□ 0.7
CHAF1A-202ENST00000585371 ADAMTS13Q76LX8 1427 aa19.42■□□□□ 0.7
CHAF1A-202ENST00000585371 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
CHAF1A-202ENST00000585371 MYOM2P54296 1465 aa19.41■□□□□ 0.7
CHAF1A-202ENST00000585371 NRXN1Q9ULB1 1477 aa19.41■□□□□ 0.7
CHAF1A-202ENST00000585371 ADGRF5Q8IZF2 1346 aa19.39■□□□□ 0.69
CHAF1A-202ENST00000585371 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.69
CHAF1A-202ENST00000585371 PHF23Q9BUL5 403 aaPredicted RBP19.38■□□□□ 0.69
CHAF1A-202ENST00000585371 DIP2AQ14689 1571 aa19.37■□□□□ 0.69
CHAF1A-202ENST00000585371 VGFO15240 615 aaPredicted RBP19.37■□□□□ 0.69
CHAF1A-202ENST00000585371 PPP1R15AO75807 674 aaPredicted RBP19.37■□□□□ 0.69
CHAF1A-202ENST00000585371 NEUROD1Q13562 356 aa19.37■□□□□ 0.69
CHAF1A-202ENST00000585371 CHD2O14647 1828 aaKnown RBP19.37■□□□□ 0.69
CHAF1A-202ENST00000585371 KCNA6P17658 529 aa19.36■□□□□ 0.69
CHAF1A-202ENST00000585371 PIK3C2GO75747 1445 aa19.35■□□□□ 0.69
CHAF1A-202ENST00000585371 L3MBTL2Q969R5 705 aa19.34■□□□□ 0.69
CHAF1A-202ENST00000585371 SLC26A8Q96RN1 970 aa19.34■□□□□ 0.69
CHAF1A-202ENST00000585371 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
CHAF1A-202ENST00000585371 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
CHAF1A-202ENST00000585371 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
CHAF1A-202ENST00000585371 FAM135BQ49AJ0 1406 aa19.34■□□□□ 0.69
CHAF1A-202ENST00000585371 TMEM94Q12767 1356 aa19.33■□□□□ 0.69
CHAF1A-202ENST00000585371 DCAF11Q8TEB1 546 aa19.33■□□□□ 0.68
CHAF1A-202ENST00000585371 TBX22Q9Y458 520 aa19.33■□□□□ 0.68
CHAF1A-202ENST00000585371 CCER1Q8TC90 406 aaPredicted RBP19.32■□□□□ 0.68
CHAF1A-202ENST00000585371 ASXL1Q8IXJ9 1541 aa19.31■□□□□ 0.68
CHAF1A-202ENST00000585371 LAMC1P11047 1609 aa19.3■□□□□ 0.68
CHAF1A-202ENST00000585371 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
CHAF1A-202ENST00000585371 STAC3Q96MF2 364 aa19.3■□□□□ 0.68
CHAF1A-202ENST00000585371 KDM2AQ9Y2K7 1162 aa19.3■□□□□ 0.68
CHAF1A-202ENST00000585371 PTPRUQ92729 1446 aa19.29■□□□□ 0.68
CHAF1A-202ENST00000585371 BCANQ96GW7 911 aa19.29■□□□□ 0.68
CHAF1A-202ENST00000585371 METP08581 1390 aa19.29■□□□□ 0.68
CHAF1A-202ENST00000585371 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
CHAF1A-202ENST00000585371 KIAA1210Q9ULL0 1709 aa19.28■□□□□ 0.68
CHAF1A-202ENST00000585371 PRAG1Q86YV5 1406 aa19.28■□□□□ 0.68
CHAF1A-202ENST00000585371 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
CHAF1A-202ENST00000585371 ROBO1Q9Y6N7 1651 aa19.27■□□□□ 0.67
CHAF1A-202ENST00000585371 C14orf93Q9H972 538 aaKnown RBP19.26■□□□□ 0.67
CHAF1A-202ENST00000585371 ADGRB1O14514 1584 aa19.25■□□□□ 0.67
CHAF1A-202ENST00000585371 MSH6P52701 1360 aa19.25■□□□□ 0.67
CHAF1A-202ENST00000585371 TONSLQ96HA7 1378 aa19.25■□□□□ 0.67
CHAF1A-202ENST00000585371 TRPM1Q7Z4N2 1603 aa19.25■□□□□ 0.67
CHAF1A-202ENST00000585371 CFAP70Q5T0N1 1121 aa19.24■□□□□ 0.67
CHAF1A-202ENST00000585371 KNDC1Q76NI1 1749 aa19.22■□□□□ 0.67
CHAF1A-202ENST00000585371 NBPF8Q3BBV2 869 aa19.21■□□□□ 0.67
CHAF1A-202ENST00000585371 NCOA3Q9Y6Q9 1424 aa19.2■□□□□ 0.66
CHAF1A-202ENST00000585371 RBM33Q96EV2 1170 aaKnown RBP19.2■□□□□ 0.66
CHAF1A-202ENST00000585371 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
CHAF1A-202ENST00000585371 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
CHAF1A-202ENST00000585371 AMOTL2Q9Y2J4 779 aa19.18■□□□□ 0.66
CHAF1A-202ENST00000585371 SLAIN2Q9P270 581 aa19.17■□□□□ 0.66
CHAF1A-202ENST00000585371 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
CHAF1A-202ENST00000585371 PHLPP1O60346 1717 aa19.17■□□□□ 0.66
CHAF1A-202ENST00000585371 TECPR2O15040 1411 aa19.17■□□□□ 0.66
CHAF1A-202ENST00000585371 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
CHAF1A-202ENST00000585371 RGS17Q9UGC6 210 aaPredicted RBP19.16■□□□□ 0.66
CHAF1A-202ENST00000585371 NBPF1Q3BBV0 1214 aa19.15■□□□□ 0.66
CHAF1A-202ENST00000585371 ABCC11Q96J66 1382 aa19.15■□□□□ 0.66
CHAF1A-202ENST00000585371 PTCH1Q13635 1447 aa19.14■□□□□ 0.65
CHAF1A-202ENST00000585371 ARHGEF28Q8N1W1 1705 aaKnown RBP19.14■□□□□ 0.65
CHAF1A-202ENST00000585371 ROBO2Q9HCK4 1378 aa19.13■□□□□ 0.65
CHAF1A-202ENST00000585371 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms