RNA–Protein interactions for RNA: ENST00000584923.1

SNORD3A-201, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

BASIC

Gene SNORD3A, Length 699 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-201ENST00000584923 TRPM2O94759 1503 aa15.45■□□□□ 0.06
SNORD3A-201ENST00000584923 SCAF11Q99590 1463 aaKnown RBP15.45■□□□□ 0.06
SNORD3A-201ENST00000584923 CHGAP10645 457 aaKnown RBP15.44■□□□□ 0.06
SNORD3A-201ENST00000584923 IQSEC2Q5JU85 1478 aa15.44■□□□□ 0.06
SNORD3A-201ENST00000584923 TRIM26Q12899 539 aaPredicted RBP15.43■□□□□ 0.06
SNORD3A-201ENST00000584923 FOXD1Q16676 465 aa15.42■□□□□ 0.06
SNORD3A-201ENST00000584923 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.41■□□□□ 0.06
SNORD3A-201ENST00000584923 ZFYVE9O95405 1425 aa15.41■□□□□ 0.06
SNORD3A-201ENST00000584923 CLTCL1P53675 1640 aa15.4■□□□□ 0.06
SNORD3A-201ENST00000584923 RIMS2Q9UQ26 1411 aa15.39■□□□□ 0.05
SNORD3A-201ENST00000584923 KIF1BO60333 1816 aa15.38■□□□□ 0.05
SNORD3A-201ENST00000584923 CPS1P31327 1500 aa15.38■□□□□ 0.05
SNORD3A-201ENST00000584923 XIRP1Q702N8 1843 aaKnown RBP15.36■□□□□ 0.05
SNORD3A-201ENST00000584923 CCDC144AA2RUR9 1427 aa15.36■□□□□ 0.05
SNORD3A-201ENST00000584923 PLEKHG1Q9ULL1 1385 aa15.36■□□□□ 0.05
SNORD3A-201ENST00000584923 PPP1R15AO75807 674 aaPredicted RBP15.35■□□□□ 0.05
SNORD3A-201ENST00000584923 ZNF326Q5BKZ1 582 aaKnown RBP15.35■□□□□ 0.05
SNORD3A-201ENST00000584923 PCGF6Q9BYE7 350 aa15.35■□□□□ 0.05
SNORD3A-201ENST00000584923 RPGRIP1LQ68CZ1 1315 aa15.35■□□□□ 0.05
SNORD3A-201ENST00000584923 ALKQ9UM73 1620 aa15.33■□□□□ 0.04
SNORD3A-201ENST00000584923 ANKRD30BQ9BXX2 1392 aa15.33■□□□□ 0.04
SNORD3A-201ENST00000584923 UBAP1LF5GYI3 381 aa15.32■□□□□ 0.04
SNORD3A-201ENST00000584923 NUTM2DQ5VT03 806 aaPredicted RBP15.32■□□□□ 0.04
SNORD3A-201ENST00000584923 BCANQ96GW7 911 aa15.32■□□□□ 0.04
SNORD3A-201ENST00000584923 SLC26A8Q96RN1 970 aa15.32■□□□□ 0.04
SNORD3A-201ENST00000584923 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
SNORD3A-201ENST00000584923 LRRC7Q96NW7 1537 aa15.32■□□□□ 0.04
SNORD3A-201ENST00000584923 VGFO15240 615 aaPredicted RBP15.31■□□□□ 0.04
SNORD3A-201ENST00000584923 SPATA31E1Q6ZUB1 1445 aa15.31■□□□□ 0.04
SNORD3A-201ENST00000584923 NEXMIFQ5QGS0 1516 aa15.3■□□□□ 0.04
SNORD3A-201ENST00000584923 ADAMTS13Q76LX8 1427 aa15.28■□□□□ 0.04
SNORD3A-201ENST00000584923 KCNA6P17658 529 aa15.28■□□□□ 0.04
SNORD3A-201ENST00000584923 RGL3Q3MIN7 710 aa15.28■□□□□ 0.04
SNORD3A-201ENST00000584923 CHD2O14647 1828 aaKnown RBP15.28■□□□□ 0.04
SNORD3A-201ENST00000584923 PIK3R4Q99570 1358 aa15.26■□□□□ 0.03
SNORD3A-201ENST00000584923 DIP2AQ14689 1571 aa15.26■□□□□ 0.03
SNORD3A-201ENST00000584923 SETBP1Q9Y6X0 1596 aa15.26■□□□□ 0.03
SNORD3A-201ENST00000584923 NWD1Q149M9 1564 aa15.25■□□□□ 0.03
SNORD3A-201ENST00000584923 PPLO60437 1756 aa15.25■□□□□ 0.03
SNORD3A-201ENST00000584923 NRXN3Q9Y4C0 1643 aa15.23■□□□□ 0.03
SNORD3A-201ENST00000584923 PIP4K2BP78356 416 aa15.22■□□□□ 0.03
SNORD3A-201ENST00000584923 STAC3Q96MF2 364 aa15.22■□□□□ 0.03
SNORD3A-201ENST00000584923 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
SNORD3A-201ENST00000584923 TOM1O60784 492 aa15.21■□□□□ 0.03
SNORD3A-201ENST00000584923 NKTRP30414 1462 aaKnown RBP15.2■□□□□ 0.02
SNORD3A-201ENST00000584923 ADGRF5Q8IZF2 1346 aa15.2■□□□□ 0.02
SNORD3A-201ENST00000584923 SCAF1Q9H7N4 1312 aaKnown RBP15.19■□□□□ 0.02
SNORD3A-201ENST00000584923 PROSER2Q86WR7 435 aaPredicted RBP15.19■□□□□ 0.02
SNORD3A-201ENST00000584923 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
SNORD3A-201ENST00000584923 AMOTL2Q9Y2J4 779 aa15.19■□□□□ 0.02
SNORD3A-201ENST00000584923 METP08581 1390 aa15.19■□□□□ 0.02
SNORD3A-201ENST00000584923 DHX57Q6P158 1386 aaKnown RBP15.19■□□□□ 0.02
SNORD3A-201ENST00000584923 TMEM94Q12767 1356 aa15.18■□□□□ 0.02
SNORD3A-201ENST00000584923 MYOM2P54296 1465 aa15.17■□□□□ 0.02
SNORD3A-201ENST00000584923 HSPA1LP34931 641 aa15.17■□□□□ 0.02
SNORD3A-201ENST00000584923 PTPRUQ92729 1446 aa15.17■□□□□ 0.02
SNORD3A-201ENST00000584923 NRXN1Q9ULB1 1477 aa15.16■□□□□ 0.02
SNORD3A-201ENST00000584923 PIK3C2GO75747 1445 aa15.16■□□□□ 0.02
SNORD3A-201ENST00000584923 NCOA3Q9Y6Q9 1424 aa15.16■□□□□ 0.02
SNORD3A-201ENST00000584923 SETD1AO15047 1707 aaKnown RBP15.15■□□□□ 0.02
SNORD3A-201ENST00000584923 C14orf93Q9H972 538 aaKnown RBP15.15■□□□□ 0.02
SNORD3A-201ENST00000584923 DCAF11Q8TEB1 546 aa15.14■□□□□ 0.01
SNORD3A-201ENST00000584923 XRN1Q8IZH2 1706 aaKnown RBP15.14■□□□□ 0.01
SNORD3A-201ENST00000584923 SIN3AQ96ST3 1273 aa15.12■□□□□ 0.01
SNORD3A-201ENST00000584923 PRAG1Q86YV5 1406 aa15.11■□□□□ 0.01
SNORD3A-201ENST00000584923 KDM2AQ9Y2K7 1162 aa15.11■□□□□ 0.01
SNORD3A-201ENST00000584923 ROBO1Q9Y6N7 1651 aa15.11■□□□□ 0.01
SNORD3A-201ENST00000584923 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.11■□□□□ 0.01
SNORD3A-201ENST00000584923 DISP3Q9P2K9 1392 aa15.1■□□□□ 0.01
SNORD3A-201ENST00000584923 CFAP70Q5T0N1 1121 aa15.09■□□□□ 0.01
SNORD3A-201ENST00000584923 C19orf44Q9H6X5 657 aa15.09■□□□□ 0.01
SNORD3A-201ENST00000584923 LAMC1P11047 1609 aa15.09■□□□□ 0.01
SNORD3A-201ENST00000584923 MSH6P52701 1360 aa15.09■□□□□ 0.01
SNORD3A-201ENST00000584923 ABCC11Q96J66 1382 aa15.09■□□□□ 0.01
SNORD3A-201ENST00000584923 NEUROD1Q13562 356 aa15.08■□□□□ 0
SNORD3A-201ENST00000584923 TMEM132EQ6IEE7 984 aa15.08■□□□□ 0
SNORD3A-201ENST00000584923 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0
SNORD3A-201ENST00000584923 PTCH1Q13635 1447 aa15.08■□□□□ 0
SNORD3A-201ENST00000584923 L3MBTL2Q969R5 705 aa15.07■□□□□ 0
SNORD3A-201ENST00000584923 SIRT1Q96EB6 747 aa15.07■□□□□ 0
SNORD3A-201ENST00000584923 TECPR2O15040 1411 aa15.07■□□□□ 0
SNORD3A-201ENST00000584923 C14orf37Q86TY3 774 aa15.06■□□□□ 0
SNORD3A-201ENST00000584923 ROBO2Q9HCK4 1378 aa15.06■□□□□ 0
SNORD3A-201ENST00000584923 FAM135BQ49AJ0 1406 aa15.06■□□□□ 0
SNORD3A-201ENST00000584923 MED1Q15648 1581 aaPredicted RBP15.06■□□□□ 0
SNORD3A-201ENST00000584923 YTHDC2Q9H6S0 1430 aaKnown RBP15.05■□□□□ -0
SNORD3A-201ENST00000584923 ASXL1Q8IXJ9 1541 aa15.05■□□□□ -0
SNORD3A-201ENST00000584923 CADPS2Q86UW7 1296 aa15.04■□□□□ -0
SNORD3A-201ENST00000584923 STK26Q9P289 416 aa15.04■□□□□ -0
SNORD3A-201ENST00000584923 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
SNORD3A-201ENST00000584923 DCCP43146 1447 aa15.03■□□□□ -0
SNORD3A-201ENST00000584923 ATF3P18847 181 aa15.03■□□□□ -0
SNORD3A-201ENST00000584923 ILDR2Q71H61 639 aa15.03■□□□□ -0
SNORD3A-201ENST00000584923 SLAIN2Q9P270 581 aa15.03■□□□□ -0
SNORD3A-201ENST00000584923 ADGRB1O14514 1584 aa15.02■□□□□ -0
SNORD3A-201ENST00000584923 ADGRL3Q9HAR2 1447 aa15.02■□□□□ -0
SNORD3A-201ENST00000584923 CLSPNQ9HAW4 1339 aa15.02■□□□□ -0
SNORD3A-201ENST00000584923 PHLPP1O60346 1717 aa15.02□□□□□ -0.01
SNORD3A-201ENST00000584923 KNDC1Q76NI1 1749 aa15.02□□□□□ -0.01
SNORD3A-201ENST00000584923 KIAA1210Q9ULL0 1709 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms