RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 IQSEC2Q5JU85 1478 aa24.21■■□□□ 1.47
ERBB2-222ENST00000584908 CPS1P31327 1500 aa24.18■■□□□ 1.46
ERBB2-222ENST00000584908 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
ERBB2-222ENST00000584908 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
ERBB2-222ENST00000584908 STRCP1A6NGW2 1772 aa24.16■■□□□ 1.46
ERBB2-222ENST00000584908 PLEKHG1Q9ULL1 1385 aa24.16■■□□□ 1.46
ERBB2-222ENST00000584908 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.16■■□□□ 1.46
ERBB2-222ENST00000584908 FBXO41Q8TF61 875 aa24.15■■□□□ 1.46
ERBB2-222ENST00000584908 FOXD1Q16676 465 aa24.12■■□□□ 1.45
ERBB2-222ENST00000584908 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
ERBB2-222ENST00000584908 ILDR1Q86SU0 546 aaPredicted RBP24.1■■□□□ 1.45
ERBB2-222ENST00000584908 DIP2AQ14689 1571 aa24.09■■□□□ 1.45
ERBB2-222ENST00000584908 PPP1R15AO75807 674 aaPredicted RBP24.09■■□□□ 1.45
ERBB2-222ENST00000584908 CCDC144AA2RUR9 1427 aa24.08■■□□□ 1.45
ERBB2-222ENST00000584908 ADAMTS13Q76LX8 1427 aa24.06■■□□□ 1.44
ERBB2-222ENST00000584908 SLC26A8Q96RN1 970 aa24.06■■□□□ 1.44
ERBB2-222ENST00000584908 NWD1Q149M9 1564 aa24.05■■□□□ 1.44
ERBB2-222ENST00000584908 SETBP1Q9Y6X0 1596 aa24.05■■□□□ 1.44
ERBB2-222ENST00000584908 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
ERBB2-222ENST00000584908 PPLO60437 1756 aa24.05■■□□□ 1.44
ERBB2-222ENST00000584908 ZNF326Q5BKZ1 582 aaKnown RBP24.05■■□□□ 1.44
ERBB2-222ENST00000584908 NRXN3Q9Y4C0 1643 aa24.05■■□□□ 1.44
ERBB2-222ENST00000584908 LRRC7Q96NW7 1537 aa24.04■■□□□ 1.44
ERBB2-222ENST00000584908 SPATA31E1Q6ZUB1 1445 aa24.04■■□□□ 1.44
ERBB2-222ENST00000584908 RPGRIP1LQ68CZ1 1315 aa24.04■■□□□ 1.44
ERBB2-222ENST00000584908 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
ERBB2-222ENST00000584908 NUTM2DQ5VT03 806 aaPredicted RBP24.03■■□□□ 1.44
ERBB2-222ENST00000584908 KCNA6P17658 529 aa24.01■■□□□ 1.43
ERBB2-222ENST00000584908 XIRP1Q702N8 1843 aaKnown RBP24.01■■□□□ 1.43
ERBB2-222ENST00000584908 ANKRD30BQ9BXX2 1392 aa24■■□□□ 1.43
ERBB2-222ENST00000584908 IFT172Q9UG01 1749 aa24■■□□□ 1.43
ERBB2-222ENST00000584908 NKTRP30414 1462 aaKnown RBP24■■□□□ 1.43
ERBB2-222ENST00000584908 PIK3R4Q99570 1358 aa23.99■■□□□ 1.43
ERBB2-222ENST00000584908 BCANQ96GW7 911 aa23.99■■□□□ 1.43
ERBB2-222ENST00000584908 VGFO15240 615 aaPredicted RBP23.96■■□□□ 1.43
ERBB2-222ENST00000584908 SETD1AO15047 1707 aaKnown RBP23.94■■□□□ 1.42
ERBB2-222ENST00000584908 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
ERBB2-222ENST00000584908 TRIM26Q12899 539 aaPredicted RBP23.92■■□□□ 1.42
ERBB2-222ENST00000584908 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
ERBB2-222ENST00000584908 ALKQ9UM73 1620 aa23.9■■□□□ 1.42
ERBB2-222ENST00000584908 PTPRUQ92729 1446 aa23.89■■□□□ 1.42
ERBB2-222ENST00000584908 UBAP1LF5GYI3 381 aa23.88■■□□□ 1.41
ERBB2-222ENST00000584908 RGL3Q3MIN7 710 aa23.88■■□□□ 1.41
ERBB2-222ENST00000584908 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
ERBB2-222ENST00000584908 METP08581 1390 aa23.87■■□□□ 1.41
ERBB2-222ENST00000584908 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
ERBB2-222ENST00000584908 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
ERBB2-222ENST00000584908 MYOM2P54296 1465 aa23.85■■□□□ 1.41
ERBB2-222ENST00000584908 TOM1O60784 492 aa23.84■■□□□ 1.41
ERBB2-222ENST00000584908 NRXN1Q9ULB1 1477 aa23.84■■□□□ 1.41
ERBB2-222ENST00000584908 ADGRF5Q8IZF2 1346 aa23.83■■□□□ 1.41
ERBB2-222ENST00000584908 PIK3C2GO75747 1445 aa23.83■■□□□ 1.41
ERBB2-222ENST00000584908 AMOTL2Q9Y2J4 779 aa23.83■■□□□ 1.4
ERBB2-222ENST00000584908 PRAG1Q86YV5 1406 aa23.82■■□□□ 1.4
ERBB2-222ENST00000584908 LAMC1P11047 1609 aa23.77■■□□□ 1.4
ERBB2-222ENST00000584908 RBM33Q96EV2 1170 aaKnown RBP23.76■■□□□ 1.39
ERBB2-222ENST00000584908 STAC3Q96MF2 364 aa23.76■■□□□ 1.39
ERBB2-222ENST00000584908 PTCH1Q13635 1447 aa23.75■■□□□ 1.39
ERBB2-222ENST00000584908 MSH6P52701 1360 aa23.75■■□□□ 1.39
ERBB2-222ENST00000584908 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
ERBB2-222ENST00000584908 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.73■■□□□ 1.39
ERBB2-222ENST00000584908 ASXL1Q8IXJ9 1541 aa23.73■■□□□ 1.39
ERBB2-222ENST00000584908 KNDC1Q76NI1 1749 aa23.71■■□□□ 1.39
ERBB2-222ENST00000584908 TECPR2O15040 1411 aa23.7■■□□□ 1.38
ERBB2-222ENST00000584908 PIP4K2BP78356 416 aa23.7■■□□□ 1.38
ERBB2-222ENST00000584908 C14orf93Q9H972 538 aaKnown RBP23.7■■□□□ 1.38
ERBB2-222ENST00000584908 DCCP43146 1447 aa23.69■■□□□ 1.38
ERBB2-222ENST00000584908 C19orf44Q9H6X5 657 aa23.69■■□□□ 1.38
ERBB2-222ENST00000584908 FAM135BQ49AJ0 1406 aa23.69■■□□□ 1.38
ERBB2-222ENST00000584908 ROBO2Q9HCK4 1378 aa23.68■■□□□ 1.38
ERBB2-222ENST00000584908 NALCNQ8IZF0 1738 aa23.68■■□□□ 1.38
ERBB2-222ENST00000584908 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
ERBB2-222ENST00000584908 DCAF11Q8TEB1 546 aa23.67■■□□□ 1.38
ERBB2-222ENST00000584908 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
ERBB2-222ENST00000584908 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
ERBB2-222ENST00000584908 SCAF1Q9H7N4 1312 aaKnown RBP23.66■■□□□ 1.38
ERBB2-222ENST00000584908 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.38
ERBB2-222ENST00000584908 ADGRB1O14514 1584 aa23.63■■□□□ 1.37
ERBB2-222ENST00000584908 YTHDC2Q9H6S0 1430 aaKnown RBP23.63■■□□□ 1.37
ERBB2-222ENST00000584908 CFAP70Q5T0N1 1121 aa23.63■■□□□ 1.37
ERBB2-222ENST00000584908 C14orf37Q86TY3 774 aa23.63■■□□□ 1.37
ERBB2-222ENST00000584908 CADPS2Q86UW7 1296 aa23.63■■□□□ 1.37
ERBB2-222ENST00000584908 SLAIN2Q9P270 581 aa23.62■■□□□ 1.37
ERBB2-222ENST00000584908 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
ERBB2-222ENST00000584908 KDM2AQ9Y2K7 1162 aa23.61■■□□□ 1.37
ERBB2-222ENST00000584908 HSPA1LP34931 641 aa23.6■■□□□ 1.37
ERBB2-222ENST00000584908 KIAA1210Q9ULL0 1709 aa23.6■■□□□ 1.37
ERBB2-222ENST00000584908 ATF3P18847 181 aa23.59■■□□□ 1.37
ERBB2-222ENST00000584908 SIRT1Q96EB6 747 aa23.59■■□□□ 1.37
ERBB2-222ENST00000584908 SIN3AQ96ST3 1273 aa23.58■■□□□ 1.36
ERBB2-222ENST00000584908 DLC1Q96QB1 1528 aa23.57■■□□□ 1.36
ERBB2-222ENST00000584908 MST1RQ04912 1400 aa23.56■■□□□ 1.36
ERBB2-222ENST00000584908 STK26Q9P289 416 aa23.56■■□□□ 1.36
ERBB2-222ENST00000584908 CDC42BPGQ6DT37 1551 aa23.55■■□□□ 1.36
ERBB2-222ENST00000584908 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
ERBB2-222ENST00000584908 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
ERBB2-222ENST00000584908 WAPLQ7Z5K2 1190 aa23.51■■□□□ 1.35
ERBB2-222ENST00000584908 AHDC1Q5TGY3 1603 aaPredicted RBP23.5■■□□□ 1.35
ERBB2-222ENST00000584908 PHLPP1O60346 1717 aa23.49■■□□□ 1.35
ERBB2-222ENST00000584908 C1orf167Q5SNV9 1468 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms