RNA–Protein interactions for RNA: ENST00000584527.1

SPECC1-223, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 3 BASIC

Gene SPECC1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-223ENST00000584527 TMEM131LA2VDJ0 1609 aa23.21■■□□□ 1.31
SPECC1-223ENST00000584527 PLEKHG1Q9ULL1 1385 aa23.19■■□□□ 1.3
SPECC1-223ENST00000584527 IQGAP3Q86VI3 1631 aa23.19■■□□□ 1.3
SPECC1-223ENST00000584527 SLC26A8Q96RN1 970 aa23.18■■□□□ 1.3
SPECC1-223ENST00000584527 MYO5BQ9ULV0 1848 aa23.17■■□□□ 1.3
SPECC1-223ENST00000584527 E9PCH4 1651 aa23.16■■□□□ 1.3
SPECC1-223ENST00000584527 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
SPECC1-223ENST00000584527 PHF23Q9BUL5 403 aaPredicted RBP23.15■■□□□ 1.3
SPECC1-223ENST00000584527 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
SPECC1-223ENST00000584527 PPARGC1BQ86YN6 1023 aaKnown RBP23.14■■□□□ 1.29
SPECC1-223ENST00000584527 CHD2O14647 1828 aaKnown RBP23.13■■□□□ 1.29
SPECC1-223ENST00000584527 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
SPECC1-223ENST00000584527 DIP2AQ14689 1571 aa23.12■■□□□ 1.29
SPECC1-223ENST00000584527 PROSER2Q86WR7 435 aaPredicted RBP23.12■■□□□ 1.29
SPECC1-223ENST00000584527 NCOA3Q9Y6Q9 1424 aa23.1■■□□□ 1.29
SPECC1-223ENST00000584527 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.09■■□□□ 1.29
SPECC1-223ENST00000584527 MSH6P52701 1360 aa23.09■■□□□ 1.29
SPECC1-223ENST00000584527 TBX22Q9Y458 520 aa23.08■■□□□ 1.29
SPECC1-223ENST00000584527 PPP1R15AO75807 674 aaPredicted RBP23.07■■□□□ 1.28
SPECC1-223ENST00000584527 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
SPECC1-223ENST00000584527 PIK3R4Q99570 1358 aa23.06■■□□□ 1.28
SPECC1-223ENST00000584527 BCANQ96GW7 911 aa23.06■■□□□ 1.28
SPECC1-223ENST00000584527 ADAMTS13Q76LX8 1427 aa23.06■■□□□ 1.28
SPECC1-223ENST00000584527 NUP155O75694 1391 aa23.04■■□□□ 1.28
SPECC1-223ENST00000584527 RBM33Q96EV2 1170 aaKnown RBP23.02■■□□□ 1.28
SPECC1-223ENST00000584527 TRPM2O94759 1503 aa23■■□□□ 1.27
SPECC1-223ENST00000584527 SLAIN2Q9P270 581 aa22.99■■□□□ 1.27
SPECC1-223ENST00000584527 RGS17Q9UGC6 210 aaPredicted RBP22.99■■□□□ 1.27
SPECC1-223ENST00000584527 SPHKAPQ2M3C7 1700 aa22.99■■□□□ 1.27
SPECC1-223ENST00000584527 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
SPECC1-223ENST00000584527 RRBP1Q9P2E9 1410 aaKnown RBP22.98■■□□□ 1.27
SPECC1-223ENST00000584527 PHLPP1O60346 1717 aa22.97■■□□□ 1.27
SPECC1-223ENST00000584527 SETBP1Q9Y6X0 1596 aa22.96■■□□□ 1.27
SPECC1-223ENST00000584527 COL16A1Q07092 1604 aaPredicted RBP22.94■■□□□ 1.26
SPECC1-223ENST00000584527 NRXN3Q9Y4C0 1643 aa22.94■■□□□ 1.26
SPECC1-223ENST00000584527 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.94■■□□□ 1.26
SPECC1-223ENST00000584527 JCADQ9P266 1359 aa22.93■■□□□ 1.26
SPECC1-223ENST00000584527 XRN1Q8IZH2 1706 aaKnown RBP22.92■■□□□ 1.26
SPECC1-223ENST00000584527 ITGAEP38570 1179 aa22.92■■□□□ 1.26
SPECC1-223ENST00000584527 DCCP43146 1447 aa22.91■■□□□ 1.26
SPECC1-223ENST00000584527 AHDC1Q5TGY3 1603 aaPredicted RBP22.91■■□□□ 1.26
SPECC1-223ENST00000584527 CADPS2Q86UW7 1296 aa22.91■■□□□ 1.26
SPECC1-223ENST00000584527 C19orf44Q9H6X5 657 aa22.91■■□□□ 1.26
SPECC1-223ENST00000584527 PTPRUQ92729 1446 aa22.91■■□□□ 1.26
SPECC1-223ENST00000584527 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
SPECC1-223ENST00000584527 AMOTL2Q9Y2J4 779 aa22.87■■□□□ 1.25
SPECC1-223ENST00000584527 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
SPECC1-223ENST00000584527 NAIPQ13075 1403 aa22.86■■□□□ 1.25
SPECC1-223ENST00000584527 C14orf37Q86TY3 774 aa22.86■■□□□ 1.25
SPECC1-223ENST00000584527 NEXMIFQ5QGS0 1516 aa22.85■■□□□ 1.25
SPECC1-223ENST00000584527 ATF3P18847 181 aa22.84■■□□□ 1.25
SPECC1-223ENST00000584527 POTEAQ6S8J7 498 aa22.84■■□□□ 1.25
SPECC1-223ENST00000584527 SHPRHQ149N8 1683 aa22.84■■□□□ 1.25
SPECC1-223ENST00000584527 SPATA31A6Q5VVP1 1343 aa22.83■■□□□ 1.25
SPECC1-223ENST00000584527 HFM1A2PYH4 1435 aa22.8■■□□□ 1.24
SPECC1-223ENST00000584527 LRP6O75581 1613 aa22.79■■□□□ 1.24
SPECC1-223ENST00000584527 METP08581 1390 aa22.79■■□□□ 1.24
SPECC1-223ENST00000584527 ZNF326Q5BKZ1 582 aaKnown RBP22.79■■□□□ 1.24
SPECC1-223ENST00000584527 KIF1BO60333 1816 aa22.79■■□□□ 1.24
SPECC1-223ENST00000584527 MST1RQ04912 1400 aa22.78■■□□□ 1.24
SPECC1-223ENST00000584527 ASXL1Q8IXJ9 1541 aa22.77■■□□□ 1.24
SPECC1-223ENST00000584527 ADGRL3Q9HAR2 1447 aa22.77■■□□□ 1.24
SPECC1-223ENST00000584527 BRINP3Q76B58 766 aa22.77■■□□□ 1.24
SPECC1-223ENST00000584527 PRAG1Q86YV5 1406 aa22.76■■□□□ 1.23
SPECC1-223ENST00000584527 NHSL1Q5SYE7 1610 aa22.75■■□□□ 1.23
SPECC1-223ENST00000584527 PTCH1Q13635 1447 aa22.74■■□□□ 1.23
SPECC1-223ENST00000584527 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
SPECC1-223ENST00000584527 SETD1AO15047 1707 aaKnown RBP22.73■■□□□ 1.23
SPECC1-223ENST00000584527 NALCNQ8IZF0 1738 aa22.73■■□□□ 1.23
SPECC1-223ENST00000584527 RPGRIP1LQ68CZ1 1315 aa22.68■■□□□ 1.22
SPECC1-223ENST00000584527 VGFO15240 615 aaPredicted RBP22.68■■□□□ 1.22
SPECC1-223ENST00000584527 ZNF772Q68DY9 489 aaPredicted RBP22.68■■□□□ 1.22
SPECC1-223ENST00000584527 LAMC1P11047 1609 aa22.67■■□□□ 1.22
SPECC1-223ENST00000584527 MEX3CQ5U5Q3 659 aaKnown RBP22.66■■□□□ 1.22
SPECC1-223ENST00000584527 PPLO60437 1756 aa22.66■■□□□ 1.22
SPECC1-223ENST00000584527 TRIM52Q96A61 297 aa22.63■■□□□ 1.21
SPECC1-223ENST00000584527 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
SPECC1-223ENST00000584527 SLC4A1APQ9BWU0 796 aaKnown RBP22.63■■□□□ 1.21
SPECC1-223ENST00000584527 C1orf167Q5SNV9 1468 aa22.62■■□□□ 1.21
SPECC1-223ENST00000584527 CDK12Q9NYV4 1490 aaPredicted RBP22.61■■□□□ 1.21
SPECC1-223ENST00000584527 ROBO2Q9HCK4 1378 aa22.61■■□□□ 1.21
SPECC1-223ENST00000584527 PNPLA6Q8IY17 1366 aa22.6■■□□□ 1.21
SPECC1-223ENST00000584527 CDC42BPGQ6DT37 1551 aa22.56■■□□□ 1.2
SPECC1-223ENST00000584527 CCDC144AA2RUR9 1427 aa22.55■■□□□ 1.2
SPECC1-223ENST00000584527 NUTM2BA6NNL0 878 aaPredicted RBP22.54■■□□□ 1.2
SPECC1-223ENST00000584527 NUTM2EB1AL46 878 aaPredicted RBP22.54■■□□□ 1.2
SPECC1-223ENST00000584527 NUTM2AQ8IVF1 878 aaPredicted RBP22.54■■□□□ 1.2
SPECC1-223ENST00000584527 SPATA31E1Q6ZUB1 1445 aa22.54■■□□□ 1.2
SPECC1-223ENST00000584527 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
SPECC1-223ENST00000584527 RXRBP28702 533 aa22.53■■□□□ 1.2
SPECC1-223ENST00000584527 TECPR2O15040 1411 aa22.53■■□□□ 1.2
SPECC1-223ENST00000584527 AFF2P51816 1311 aa22.53■■□□□ 1.2
SPECC1-223ENST00000584527 SOS2Q07890 1332 aaPredicted RBP22.53■■□□□ 1.2
SPECC1-223ENST00000584527 ANKRD30BQ9BXX2 1392 aa22.51■■□□□ 1.19
SPECC1-223ENST00000584527 DDX17Q92841 729 aaKnown RBP22.51■■□□□ 1.19
SPECC1-223ENST00000584527 ACIN1Q9UKV3 1341 aaKnown RBP22.49■■□□□ 1.19
SPECC1-223ENST00000584527 COL22A1Q8NFW1 1626 aaPredicted RBP22.49■■□□□ 1.19
SPECC1-223ENST00000584527 KNDC1Q76NI1 1749 aa22.48■■□□□ 1.19
SPECC1-223ENST00000584527 UPF1Q92900 1129 aaKnown RBP eCLIP22.47■■□□□ 1.19
SPECC1-223ENST00000584527 ORAI2Q96SN7 254 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms