RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 PLEKHG1Q9ULL1 1385 aa25.34■■□□□ 1.65
ITGB4-211ENST00000584374 PCGF6Q9BYE7 350 aa25.34■■□□□ 1.65
ITGB4-211ENST00000584374 CHGAP10645 457 aaKnown RBP25.33■■□□□ 1.65
ITGB4-211ENST00000584374 SLC4A1APQ9BWU0 796 aaKnown RBP25.31■■□□□ 1.64
ITGB4-211ENST00000584374 SLC26A8Q96RN1 970 aa25.3■■□□□ 1.64
ITGB4-211ENST00000584374 ALKQ9UM73 1620 aa25.29■■□□□ 1.64
ITGB4-211ENST00000584374 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
ITGB4-211ENST00000584374 ADAMTS13Q76LX8 1427 aa25.27■■□□□ 1.64
ITGB4-211ENST00000584374 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
ITGB4-211ENST00000584374 UBAP1LF5GYI3 381 aa25.26■■□□□ 1.63
ITGB4-211ENST00000584374 NUTM2DQ5VT03 806 aaPredicted RBP25.26■■□□□ 1.63
ITGB4-211ENST00000584374 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.26■■□□□ 1.63
ITGB4-211ENST00000584374 HDGFP51858 240 aaKnown RBP25.25■■□□□ 1.63
ITGB4-211ENST00000584374 PPP1R15AO75807 674 aaPredicted RBP25.24■■□□□ 1.63
ITGB4-211ENST00000584374 FOXD1Q16676 465 aa25.24■■□□□ 1.63
ITGB4-211ENST00000584374 NEXMIFQ5QGS0 1516 aa25.23■■□□□ 1.63
ITGB4-211ENST00000584374 KCNA6P17658 529 aa25.23■■□□□ 1.63
ITGB4-211ENST00000584374 MPHOSPH9Q99550 1183 aa25.23■■□□□ 1.63
ITGB4-211ENST00000584374 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
ITGB4-211ENST00000584374 RAB3GAP2Q9H2M9 1393 aa25.22■■□□□ 1.63
ITGB4-211ENST00000584374 XIRP1Q702N8 1843 aaKnown RBP25.22■■□□□ 1.63
ITGB4-211ENST00000584374 NRXN3Q9Y4C0 1643 aa25.21■■□□□ 1.63
ITGB4-211ENST00000584374 DIP2AQ14689 1571 aa25.2■■□□□ 1.62
ITGB4-211ENST00000584374 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
ITGB4-211ENST00000584374 NKTRP30414 1462 aaKnown RBP25.19■■□□□ 1.62
ITGB4-211ENST00000584374 SETBP1Q9Y6X0 1596 aa25.18■■□□□ 1.62
ITGB4-211ENST00000584374 BCANQ96GW7 911 aa25.18■■□□□ 1.62
ITGB4-211ENST00000584374 KIF1BO60333 1816 aa25.18■■□□□ 1.62
ITGB4-211ENST00000584374 ACIN1Q9UKV3 1341 aaKnown RBP25.17■■□□□ 1.62
ITGB4-211ENST00000584374 CHD2O14647 1828 aaKnown RBP25.16■■□□□ 1.62
ITGB4-211ENST00000584374 TMEM94Q12767 1356 aa25.16■■□□□ 1.62
ITGB4-211ENST00000584374 ZNF326Q5BKZ1 582 aaKnown RBP25.15■■□□□ 1.62
ITGB4-211ENST00000584374 TOM1O60784 492 aa25.14■■□□□ 1.62
ITGB4-211ENST00000584374 PIK3R4Q99570 1358 aa25.13■■□□□ 1.61
ITGB4-211ENST00000584374 PTPRUQ92729 1446 aa25.12■■□□□ 1.61
ITGB4-211ENST00000584374 CCDC144AA2RUR9 1427 aa25.11■■□□□ 1.61
ITGB4-211ENST00000584374 SPATA31E1Q6ZUB1 1445 aa25.11■■□□□ 1.61
ITGB4-211ENST00000584374 RBM33Q96EV2 1170 aaKnown RBP25.1■■□□□ 1.61
ITGB4-211ENST00000584374 PIP4K2BP78356 416 aa25.09■■□□□ 1.61
ITGB4-211ENST00000584374 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
ITGB4-211ENST00000584374 METP08581 1390 aa25.06■■□□□ 1.6
ITGB4-211ENST00000584374 PPLO60437 1756 aa25.06■■□□□ 1.6
ITGB4-211ENST00000584374 RPGRIP1LQ68CZ1 1315 aa25.06■■□□□ 1.6
ITGB4-211ENST00000584374 XRN1Q8IZH2 1706 aaKnown RBP25.06■■□□□ 1.6
ITGB4-211ENST00000584374 HRCP23327 699 aa25.05■■□□□ 1.6
ITGB4-211ENST00000584374 SETD1AO15047 1707 aaKnown RBP25.03■■□□□ 1.6
ITGB4-211ENST00000584374 SCAF1Q9H7N4 1312 aaKnown RBP25.03■■□□□ 1.6
ITGB4-211ENST00000584374 HSPA1LP34931 641 aa25.01■■□□□ 1.59
ITGB4-211ENST00000584374 AMOTL2Q9Y2J4 779 aa25.01■■□□□ 1.59
ITGB4-211ENST00000584374 NCOA3Q9Y6Q9 1424 aa25.01■■□□□ 1.59
ITGB4-211ENST00000584374 VGFO15240 615 aaPredicted RBP25■■□□□ 1.59
ITGB4-211ENST00000584374 IFT172Q9UG01 1749 aa25■■□□□ 1.59
ITGB4-211ENST00000584374 ANKRD30BQ9BXX2 1392 aa24.98■■□□□ 1.59
ITGB4-211ENST00000584374 MSH6P52701 1360 aa24.96■■□□□ 1.59
ITGB4-211ENST00000584374 ADGRF5Q8IZF2 1346 aa24.95■■□□□ 1.58
ITGB4-211ENST00000584374 RGL3Q3MIN7 710 aa24.95■■□□□ 1.58
ITGB4-211ENST00000584374 FAM135BQ49AJ0 1406 aa24.95■■□□□ 1.58
ITGB4-211ENST00000584374 PRAG1Q86YV5 1406 aa24.93■■□□□ 1.58
ITGB4-211ENST00000584374 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.9■■□□□ 1.58
ITGB4-211ENST00000584374 PIK3C2GO75747 1445 aa24.9■■□□□ 1.58
ITGB4-211ENST00000584374 ROBO1Q9Y6N7 1651 aa24.89■■□□□ 1.58
ITGB4-211ENST00000584374 NRXN1Q9ULB1 1477 aa24.89■■□□□ 1.57
ITGB4-211ENST00000584374 PTCH1Q13635 1447 aa24.88■■□□□ 1.57
ITGB4-211ENST00000584374 ASXL1Q8IXJ9 1541 aa24.88■■□□□ 1.57
ITGB4-211ENST00000584374 C19orf44Q9H6X5 657 aa24.87■■□□□ 1.57
ITGB4-211ENST00000584374 MYOM2P54296 1465 aa24.87■■□□□ 1.57
ITGB4-211ENST00000584374 ROBO2Q9HCK4 1378 aa24.86■■□□□ 1.57
ITGB4-211ENST00000584374 SLAIN2Q9P270 581 aa24.86■■□□□ 1.57
ITGB4-211ENST00000584374 DCCP43146 1447 aa24.86■■□□□ 1.57
ITGB4-211ENST00000584374 C14orf37Q86TY3 774 aa24.83■■□□□ 1.57
ITGB4-211ENST00000584374 ADGRL3Q9HAR2 1447 aa24.83■■□□□ 1.57
ITGB4-211ENST00000584374 NALCNQ8IZF0 1738 aa24.83■■□□□ 1.57
ITGB4-211ENST00000584374 CADPS2Q86UW7 1296 aa24.81■■□□□ 1.56
ITGB4-211ENST00000584374 TECPR2O15040 1411 aa24.79■■□□□ 1.56
ITGB4-211ENST00000584374 DISP3Q9P2K9 1392 aa24.78■■□□□ 1.56
ITGB4-211ENST00000584374 MST1RQ04912 1400 aa24.78■■□□□ 1.56
ITGB4-211ENST00000584374 MED1Q15648 1581 aaPredicted RBP24.77■■□□□ 1.56
ITGB4-211ENST00000584374 ATF3P18847 181 aa24.77■■□□□ 1.56
ITGB4-211ENST00000584374 LRPPRCP42704 1394 aaKnown RBP24.77■■□□□ 1.56
ITGB4-211ENST00000584374 CCER1Q8TC90 406 aaPredicted RBP24.76■■□□□ 1.55
ITGB4-211ENST00000584374 C14orf93Q9H972 538 aaKnown RBP24.76■■□□□ 1.55
ITGB4-211ENST00000584374 TMEM132EQ6IEE7 984 aa24.75■■□□□ 1.55
ITGB4-211ENST00000584374 DHX57Q6P158 1386 aaKnown RBP24.75■■□□□ 1.55
ITGB4-211ENST00000584374 ABCC11Q96J66 1382 aa24.74■■□□□ 1.55
ITGB4-211ENST00000584374 KNDC1Q76NI1 1749 aa24.74■■□□□ 1.55
ITGB4-211ENST00000584374 LAMC1P11047 1609 aa24.73■■□□□ 1.55
ITGB4-211ENST00000584374 YTHDC2Q9H6S0 1430 aaKnown RBP24.72■■□□□ 1.55
ITGB4-211ENST00000584374 CFAP70Q5T0N1 1121 aa24.72■■□□□ 1.55
ITGB4-211ENST00000584374 COL16A1Q07092 1604 aaPredicted RBP24.72■■□□□ 1.55
ITGB4-211ENST00000584374 AHDC1Q5TGY3 1603 aaPredicted RBP24.72■■□□□ 1.55
ITGB4-211ENST00000584374 BRINP3Q76B58 766 aa24.71■■□□□ 1.55
ITGB4-211ENST00000584374 PHLPP1O60346 1717 aa24.7■■□□□ 1.54
ITGB4-211ENST00000584374 ADGRB1O14514 1584 aa24.7■■□□□ 1.54
ITGB4-211ENST00000584374 PLEKHH1Q9ULM0 1364 aa24.68■■□□□ 1.54
ITGB4-211ENST00000584374 STK26Q9P289 416 aa24.68■■□□□ 1.54
ITGB4-211ENST00000584374 DCAF11Q8TEB1 546 aa24.67■■□□□ 1.54
ITGB4-211ENST00000584374 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
ITGB4-211ENST00000584374 C1orf167Q5SNV9 1468 aa24.66■■□□□ 1.54
ITGB4-211ENST00000584374 WAPLQ7Z5K2 1190 aa24.66■■□□□ 1.54
ITGB4-211ENST00000584374 ILDR2Q71H61 639 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms