RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 RIMS2Q9UQ26 1411 aa22.13■■□□□ 1.13
SCN4A-203ENST00000584310 SCAF1Q9H7N4 1312 aaKnown RBP22.11■■□□□ 1.13
SCN4A-203ENST00000584310 SLC26A8Q96RN1 970 aa22.09■■□□□ 1.13
SCN4A-203ENST00000584310 PLEKHG1Q9ULL1 1385 aa22.08■■□□□ 1.12
SCN4A-203ENST00000584310 KCNA6P17658 529 aa22.06■■□□□ 1.12
SCN4A-203ENST00000584310 TMEM131LA2VDJ0 1609 aa22.06■■□□□ 1.12
SCN4A-203ENST00000584310 ZFYVE9O95405 1425 aa22.05■■□□□ 1.12
SCN4A-203ENST00000584310 SPHKAPQ2M3C7 1700 aa22.03■■□□□ 1.12
SCN4A-203ENST00000584310 PIP4K2BP78356 416 aa22.03■■□□□ 1.12
SCN4A-203ENST00000584310 SETD5Q9C0A6 1442 aa22.03■■□□□ 1.12
SCN4A-203ENST00000584310 PROSER2Q86WR7 435 aaPredicted RBP22.02■■□□□ 1.12
SCN4A-203ENST00000584310 TBX22Q9Y458 520 aa22.02■■□□□ 1.12
SCN4A-203ENST00000584310 TRPM2O94759 1503 aa22.01■■□□□ 1.11
SCN4A-203ENST00000584310 NUTM2DQ5VT03 806 aaPredicted RBP22.01■■□□□ 1.11
SCN4A-203ENST00000584310 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
SCN4A-203ENST00000584310 LRRC7Q96NW7 1537 aa22■■□□□ 1.11
SCN4A-203ENST00000584310 MPHOSPH9Q99550 1183 aa21.99■■□□□ 1.11
SCN4A-203ENST00000584310 VGFO15240 615 aaPredicted RBP21.97■■□□□ 1.11
SCN4A-203ENST00000584310 CCDC144AA2RUR9 1427 aa21.97■■□□□ 1.11
SCN4A-203ENST00000584310 C14orf37Q86TY3 774 aa21.96■■□□□ 1.11
SCN4A-203ENST00000584310 RPGRIP1LQ68CZ1 1315 aa21.96■■□□□ 1.11
SCN4A-203ENST00000584310 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
SCN4A-203ENST00000584310 NKTRP30414 1462 aaKnown RBP21.96■■□□□ 1.11
SCN4A-203ENST00000584310 DIP2AQ14689 1571 aa21.95■■□□□ 1.1
SCN4A-203ENST00000584310 MSH6P52701 1360 aa21.93■■□□□ 1.1
SCN4A-203ENST00000584310 TMEM94Q12767 1356 aa21.93■■□□□ 1.1
SCN4A-203ENST00000584310 MYO5BQ9ULV0 1848 aa21.93■■□□□ 1.1
SCN4A-203ENST00000584310 CLTCL1P53675 1640 aa21.91■■□□□ 1.1
SCN4A-203ENST00000584310 RAB3GAP2Q9H2M9 1393 aa21.9■■□□□ 1.1
SCN4A-203ENST00000584310 KIF1BO60333 1816 aa21.9■■□□□ 1.1
SCN4A-203ENST00000584310 FOXD1Q16676 465 aa21.9■■□□□ 1.1
SCN4A-203ENST00000584310 HRCP23327 699 aa21.87■■□□□ 1.09
SCN4A-203ENST00000584310 ADAMTS13Q76LX8 1427 aa21.87■■□□□ 1.09
SCN4A-203ENST00000584310 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
SCN4A-203ENST00000584310 NWD1Q149M9 1564 aa21.87■■□□□ 1.09
SCN4A-203ENST00000584310 AMOTL2Q9Y2J4 779 aa21.86■■□□□ 1.09
SCN4A-203ENST00000584310 NCOA3Q9Y6Q9 1424 aa21.86■■□□□ 1.09
SCN4A-203ENST00000584310 RGL3Q3MIN7 710 aa21.84■■□□□ 1.09
SCN4A-203ENST00000584310 ATF3P18847 181 aa21.83■■□□□ 1.09
SCN4A-203ENST00000584310 HSPA1LP34931 641 aa21.83■■□□□ 1.09
SCN4A-203ENST00000584310 SETBP1Q9Y6X0 1596 aa21.82■■□□□ 1.08
SCN4A-203ENST00000584310 CADPS2Q86UW7 1296 aa21.82■■□□□ 1.08
SCN4A-203ENST00000584310 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
SCN4A-203ENST00000584310 NEXMIFQ5QGS0 1516 aa21.81■■□□□ 1.08
SCN4A-203ENST00000584310 ANKRD30BQ9BXX2 1392 aa21.81■■□□□ 1.08
SCN4A-203ENST00000584310 C19orf44Q9H6X5 657 aa21.8■■□□□ 1.08
SCN4A-203ENST00000584310 DISP3Q9P2K9 1392 aa21.79■■□□□ 1.08
SCN4A-203ENST00000584310 CHD2O14647 1828 aaKnown RBP21.78■■□□□ 1.08
SCN4A-203ENST00000584310 SLAIN2Q9P270 581 aa21.77■■□□□ 1.08
SCN4A-203ENST00000584310 FAM135BQ49AJ0 1406 aa21.76■■□□□ 1.07
SCN4A-203ENST00000584310 METP08581 1390 aa21.74■■□□□ 1.07
SCN4A-203ENST00000584310 SPATA31E1Q6ZUB1 1445 aa21.71■■□□□ 1.07
SCN4A-203ENST00000584310 PTPRUQ92729 1446 aa21.7■■□□□ 1.06
SCN4A-203ENST00000584310 NRXN3Q9Y4C0 1643 aa21.69■■□□□ 1.06
SCN4A-203ENST00000584310 XIRP1Q702N8 1843 aaKnown RBP21.69■■□□□ 1.06
SCN4A-203ENST00000584310 STAC3Q96MF2 364 aa21.68■■□□□ 1.06
SCN4A-203ENST00000584310 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
SCN4A-203ENST00000584310 DCCP43146 1447 aa21.68■■□□□ 1.06
SCN4A-203ENST00000584310 ALKQ9UM73 1620 aa21.68■■□□□ 1.06
SCN4A-203ENST00000584310 ADGRF5Q8IZF2 1346 aa21.67■■□□□ 1.06
SCN4A-203ENST00000584310 PPLO60437 1756 aa21.66■■□□□ 1.06
SCN4A-203ENST00000584310 PTCH1Q13635 1447 aa21.65■■□□□ 1.06
SCN4A-203ENST00000584310 XRN1Q8IZH2 1706 aaKnown RBP21.64■■□□□ 1.06
SCN4A-203ENST00000584310 STK26Q9P289 416 aa21.62■■□□□ 1.05
SCN4A-203ENST00000584310 ROBO1Q9Y6N7 1651 aa21.62■■□□□ 1.05
SCN4A-203ENST00000584310 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
SCN4A-203ENST00000584310 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
SCN4A-203ENST00000584310 DHX57Q6P158 1386 aaKnown RBP21.6■■□□□ 1.05
SCN4A-203ENST00000584310 MYOM2P54296 1465 aa21.59■■□□□ 1.05
SCN4A-203ENST00000584310 DCAF11Q8TEB1 546 aa21.59■■□□□ 1.05
SCN4A-203ENST00000584310 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.59■■□□□ 1.05
SCN4A-203ENST00000584310 KDM2AQ9Y2K7 1162 aa21.58■■□□□ 1.05
SCN4A-203ENST00000584310 ROBO2Q9HCK4 1378 aa21.58■■□□□ 1.04
SCN4A-203ENST00000584310 C14orf93Q9H972 538 aaKnown RBP21.57■■□□□ 1.04
SCN4A-203ENST00000584310 LRPPRCP42704 1394 aaKnown RBP21.57■■□□□ 1.04
SCN4A-203ENST00000584310 PRAG1Q86YV5 1406 aa21.56■■□□□ 1.04
SCN4A-203ENST00000584310 TMEM132EQ6IEE7 984 aa21.55■■□□□ 1.04
SCN4A-203ENST00000584310 ABCC11Q96J66 1382 aa21.55■■□□□ 1.04
SCN4A-203ENST00000584310 JCADQ9P266 1359 aa21.55■■□□□ 1.04
SCN4A-203ENST00000584310 BRINP3Q76B58 766 aa21.54■■□□□ 1.04
SCN4A-203ENST00000584310 IFT172Q9UG01 1749 aa21.53■■□□□ 1.04
SCN4A-203ENST00000584310 CFAP70Q5T0N1 1121 aa21.53■■□□□ 1.04
SCN4A-203ENST00000584310 MED1Q15648 1581 aaPredicted RBP21.53■■□□□ 1.04
SCN4A-203ENST00000584310 LAMC1P11047 1609 aa21.52■■□□□ 1.04
SCN4A-203ENST00000584310 YTHDC2Q9H6S0 1430 aaKnown RBP21.52■■□□□ 1.04
SCN4A-203ENST00000584310 TRIM26Q12899 539 aaPredicted RBP21.51■■□□□ 1.03
SCN4A-203ENST00000584310 SIRT1Q96EB6 747 aa21.51■■□□□ 1.03
SCN4A-203ENST00000584310 POGKQ9P215 609 aa21.51■■□□□ 1.03
SCN4A-203ENST00000584310 TECPR2O15040 1411 aa21.51■■□□□ 1.03
SCN4A-203ENST00000584310 MST1RQ04912 1400 aa21.51■■□□□ 1.03
SCN4A-203ENST00000584310 SETD1AO15047 1707 aaKnown RBP21.5■■□□□ 1.03
SCN4A-203ENST00000584310 PHLPP1O60346 1717 aa21.5■■□□□ 1.03
SCN4A-203ENST00000584310 NRXN1Q9ULB1 1477 aa21.5■■□□□ 1.03
SCN4A-203ENST00000584310 LRRC59Q96AG4 307 aaKnown RBP21.49■■□□□ 1.03
SCN4A-203ENST00000584310 MEX3CQ5U5Q3 659 aaKnown RBP21.48■■□□□ 1.03
SCN4A-203ENST00000584310 SPATA31A6Q5VVP1 1343 aa21.48■■□□□ 1.03
SCN4A-203ENST00000584310 ASXL1Q8IXJ9 1541 aa21.47■■□□□ 1.03
SCN4A-203ENST00000584310 WAPLQ7Z5K2 1190 aa21.47■■□□□ 1.03
SCN4A-203ENST00000584310 AHDC1Q5TGY3 1603 aaPredicted RBP21.46■■□□□ 1.03
SCN4A-203ENST00000584310 C1orf167Q5SNV9 1468 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms