RNA–Protein interactions for RNA: ENST00000583340.1

SUPT6H-208, Transcript of SPT6 homolog, histone chaperone, humanhuman

TSL 3

Gene SUPT6H, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT6H-208ENST00000583340 RIMS2Q9UQ26 1411 aa12.64□□□□□ -0.39
SUPT6H-208ENST00000583340 TMEM131LA2VDJ0 1609 aa12.64□□□□□ -0.39
SUPT6H-208ENST00000583340 LTBP4Q8N2S1 1624 aa12.63□□□□□ -0.39
SUPT6H-208ENST00000583340 HRCP23327 699 aa12.63□□□□□ -0.39
SUPT6H-208ENST00000583340 ZNF326Q5BKZ1 582 aaKnown RBP12.63□□□□□ -0.39
SUPT6H-208ENST00000583340 RAB3GAP2Q9H2M9 1393 aa12.62□□□□□ -0.39
SUPT6H-208ENST00000583340 PLEKHG1Q9ULL1 1385 aa12.62□□□□□ -0.39
SUPT6H-208ENST00000583340 MPHOSPH9Q99550 1183 aa12.62□□□□□ -0.39
SUPT6H-208ENST00000583340 ZFYVE9O95405 1425 aa12.62□□□□□ -0.39
SUPT6H-208ENST00000583340 ILDR1Q86SU0 546 aaPredicted RBP12.61□□□□□ -0.39
SUPT6H-208ENST00000583340 CCDC144AA2RUR9 1427 aa12.61□□□□□ -0.39
SUPT6H-208ENST00000583340 KIF1BO60333 1816 aa12.6□□□□□ -0.39
SUPT6H-208ENST00000583340 MYO5BQ9ULV0 1848 aa12.59□□□□□ -0.39
SUPT6H-208ENST00000583340 CLTCL1P53675 1640 aa12.58□□□□□ -0.4
SUPT6H-208ENST00000583340 RPGRIP1LQ68CZ1 1315 aa12.58□□□□□ -0.4
SUPT6H-208ENST00000583340 DIP2AQ14689 1571 aa12.57□□□□□ -0.4
SUPT6H-208ENST00000583340 VGFO15240 615 aaPredicted RBP12.56□□□□□ -0.4
SUPT6H-208ENST00000583340 KCNA6P17658 529 aa12.56□□□□□ -0.4
SUPT6H-208ENST00000583340 SLC26A8Q96RN1 970 aa12.56□□□□□ -0.4
SUPT6H-208ENST00000583340 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
SUPT6H-208ENST00000583340 UBAP1LF5GYI3 381 aa12.55□□□□□ -0.4
SUPT6H-208ENST00000583340 TOM1O60784 492 aa12.55□□□□□ -0.4
SUPT6H-208ENST00000583340 FOXD1Q16676 465 aa12.55□□□□□ -0.4
SUPT6H-208ENST00000583340 PIK3R4Q99570 1358 aa12.55□□□□□ -0.4
SUPT6H-208ENST00000583340 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
SUPT6H-208ENST00000583340 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
SUPT6H-208ENST00000583340 ANKRD30BQ9BXX2 1392 aa12.52□□□□□ -0.41
SUPT6H-208ENST00000583340 NEXMIFQ5QGS0 1516 aa12.52□□□□□ -0.41
SUPT6H-208ENST00000583340 LRRC7Q96NW7 1537 aa12.52□□□□□ -0.41
SUPT6H-208ENST00000583340 PROSER2Q86WR7 435 aaPredicted RBP12.51□□□□□ -0.41
SUPT6H-208ENST00000583340 NWD1Q149M9 1564 aa12.51□□□□□ -0.41
SUPT6H-208ENST00000583340 SETBP1Q9Y6X0 1596 aa12.51□□□□□ -0.41
SUPT6H-208ENST00000583340 SENP3Q9H4L4 574 aaPredicted RBP12.5□□□□□ -0.41
SUPT6H-208ENST00000583340 ADAMTS13Q76LX8 1427 aa12.5□□□□□ -0.41
SUPT6H-208ENST00000583340 SCAF1Q9H7N4 1312 aaKnown RBP12.49□□□□□ -0.41
SUPT6H-208ENST00000583340 NCOA3Q9Y6Q9 1424 aa12.48□□□□□ -0.41
SUPT6H-208ENST00000583340 TMEM94Q12767 1356 aa12.48□□□□□ -0.41
SUPT6H-208ENST00000583340 RGL3Q3MIN7 710 aa12.48□□□□□ -0.41
SUPT6H-208ENST00000583340 STRCP1A6NGW2 1772 aa12.48□□□□□ -0.41
SUPT6H-208ENST00000583340 SPATA31E1Q6ZUB1 1445 aa12.47□□□□□ -0.41
SUPT6H-208ENST00000583340 MSH6P52701 1360 aa12.47□□□□□ -0.41
SUPT6H-208ENST00000583340 CHD2O14647 1828 aaKnown RBP12.47□□□□□ -0.41
SUPT6H-208ENST00000583340 C14orf37Q86TY3 774 aa12.47□□□□□ -0.41
SUPT6H-208ENST00000583340 PPLO60437 1756 aa12.46□□□□□ -0.41
SUPT6H-208ENST00000583340 ZEB1P37275 1124 aaPredicted RBP12.46□□□□□ -0.41
SUPT6H-208ENST00000583340 STAC3Q96MF2 364 aa12.46□□□□□ -0.41
SUPT6H-208ENST00000583340 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.41
SUPT6H-208ENST00000583340 PIP4K2BP78356 416 aa12.45□□□□□ -0.42
SUPT6H-208ENST00000583340 NRXN3Q9Y4C0 1643 aa12.44□□□□□ -0.42
SUPT6H-208ENST00000583340 METP08581 1390 aa12.42□□□□□ -0.42
SUPT6H-208ENST00000583340 MYOM2P54296 1465 aa12.41□□□□□ -0.42
SUPT6H-208ENST00000583340 ALKQ9UM73 1620 aa12.41□□□□□ -0.42
SUPT6H-208ENST00000583340 ATF3P18847 181 aa12.41□□□□□ -0.42
SUPT6H-208ENST00000583340 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
SUPT6H-208ENST00000583340 C19orf44Q9H6X5 657 aa12.41□□□□□ -0.42
SUPT6H-208ENST00000583340 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
SUPT6H-208ENST00000583340 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.42
SUPT6H-208ENST00000583340 PTCH1Q13635 1447 aa12.4□□□□□ -0.42
SUPT6H-208ENST00000583340 IFT172Q9UG01 1749 aa12.4□□□□□ -0.43
SUPT6H-208ENST00000583340 XIRP1Q702N8 1843 aaKnown RBP12.39□□□□□ -0.43
SUPT6H-208ENST00000583340 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
SUPT6H-208ENST00000583340 DCCP43146 1447 aa12.39□□□□□ -0.43
SUPT6H-208ENST00000583340 PTPRUQ92729 1446 aa12.39□□□□□ -0.43
SUPT6H-208ENST00000583340 LAMC1P11047 1609 aa12.38□□□□□ -0.43
SUPT6H-208ENST00000583340 RBM33Q96EV2 1170 aaKnown RBP12.38□□□□□ -0.43
SUPT6H-208ENST00000583340 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
SUPT6H-208ENST00000583340 PRAG1Q86YV5 1406 aa12.37□□□□□ -0.43
SUPT6H-208ENST00000583340 DCAF11Q8TEB1 546 aa12.37□□□□□ -0.43
SUPT6H-208ENST00000583340 SLAIN2Q9P270 581 aa12.37□□□□□ -0.43
SUPT6H-208ENST00000583340 NRXN1Q9ULB1 1477 aa12.37□□□□□ -0.43
SUPT6H-208ENST00000583340 DHX57Q6P158 1386 aaKnown RBP12.36□□□□□ -0.43
SUPT6H-208ENST00000583340 C14orf93Q9H972 538 aaKnown RBP12.36□□□□□ -0.43
SUPT6H-208ENST00000583340 ADGRL3Q9HAR2 1447 aa12.36□□□□□ -0.43
SUPT6H-208ENST00000583340 LRPPRCP42704 1394 aaKnown RBP12.35□□□□□ -0.43
SUPT6H-208ENST00000583340 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
SUPT6H-208ENST00000583340 KDM2AQ9Y2K7 1162 aa12.35□□□□□ -0.43
SUPT6H-208ENST00000583340 ABCC11Q96J66 1382 aa12.34□□□□□ -0.43
SUPT6H-208ENST00000583340 HSPA1LP34931 641 aa12.34□□□□□ -0.43
SUPT6H-208ENST00000583340 TECPR2O15040 1411 aa12.34□□□□□ -0.43
SUPT6H-208ENST00000583340 STK26Q9P289 416 aa12.33□□□□□ -0.44
SUPT6H-208ENST00000583340 YTHDC2Q9H6S0 1430 aaKnown RBP12.33□□□□□ -0.44
SUPT6H-208ENST00000583340 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.33□□□□□ -0.44
SUPT6H-208ENST00000583340 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
SUPT6H-208ENST00000583340 CFAP70Q5T0N1 1121 aa12.32□□□□□ -0.44
SUPT6H-208ENST00000583340 SIRT1Q96EB6 747 aa12.32□□□□□ -0.44
SUPT6H-208ENST00000583340 TMEM132EQ6IEE7 984 aa12.31□□□□□ -0.44
SUPT6H-208ENST00000583340 ROBO1Q9Y6N7 1651 aa12.31□□□□□ -0.44
SUPT6H-208ENST00000583340 KNDC1Q76NI1 1749 aa12.31□□□□□ -0.44
SUPT6H-208ENST00000583340 POGKQ9P215 609 aa12.29□□□□□ -0.44
SUPT6H-208ENST00000583340 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
SUPT6H-208ENST00000583340 NEUROD1Q13562 356 aa12.28□□□□□ -0.44
SUPT6H-208ENST00000583340 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
SUPT6H-208ENST00000583340 MST1RQ04912 1400 aa12.28□□□□□ -0.44
SUPT6H-208ENST00000583340 DLC1Q96QB1 1528 aa12.27□□□□□ -0.44
SUPT6H-208ENST00000583340 CCER1Q8TC90 406 aaPredicted RBP12.27□□□□□ -0.45
SUPT6H-208ENST00000583340 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
SUPT6H-208ENST00000583340 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
SUPT6H-208ENST00000583340 WAPLQ7Z5K2 1190 aa12.25□□□□□ -0.45
SUPT6H-208ENST00000583340 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
SUPT6H-208ENST00000583340 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms