RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 ZFYVE9O95405 1425 aa17.21■□□□□ 0.35
CCDC57-216ENST00000582885 CHGAP10645 457 aaKnown RBP17.21■□□□□ 0.35
CCDC57-216ENST00000582885 TRPM1Q7Z4N2 1603 aa17.21■□□□□ 0.35
CCDC57-216ENST00000582885 NRXN1Q9ULB1 1477 aa17.2■□□□□ 0.34
CCDC57-216ENST00000582885 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
CCDC57-216ENST00000582885 STAG3Q9UJ98 1225 aa17.19■□□□□ 0.34
CCDC57-216ENST00000582885 PRAG1Q86YV5 1406 aa17.19■□□□□ 0.34
CCDC57-216ENST00000582885 SLIT1O75093 1534 aa17.18■□□□□ 0.34
CCDC57-216ENST00000582885 LAMC1P11047 1609 aa17.18■□□□□ 0.34
CCDC57-216ENST00000582885 PLPPR3Q6T4P5 718 aa17.17■□□□□ 0.34
CCDC57-216ENST00000582885 ARHGAP23Q9P227 1491 aa17.17■□□□□ 0.34
CCDC57-216ENST00000582885 VGFO15240 615 aaPredicted RBP17.16■□□□□ 0.34
CCDC57-216ENST00000582885 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
CCDC57-216ENST00000582885 RIMS2Q9UQ26 1411 aa17.15■□□□□ 0.34
CCDC57-216ENST00000582885 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
CCDC57-216ENST00000582885 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
CCDC57-216ENST00000582885 TMEM2Q9UHN6 1383 aa17.15■□□□□ 0.34
CCDC57-216ENST00000582885 HDGFP51858 240 aaKnown RBP17.14■□□□□ 0.33
CCDC57-216ENST00000582885 THEMISQ8N1K5 641 aaPredicted RBP17.14■□□□□ 0.33
CCDC57-216ENST00000582885 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.13■□□□□ 0.33
CCDC57-216ENST00000582885 PIK3C2GO75747 1445 aa17.13■□□□□ 0.33
CCDC57-216ENST00000582885 POLR1AO95602 1720 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-216ENST00000582885 ADGRF5Q8IZF2 1346 aa17.11■□□□□ 0.33
CCDC57-216ENST00000582885 SETBP1Q9Y6X0 1596 aa17.11■□□□□ 0.33
CCDC57-216ENST00000582885 SETD1AO15047 1707 aaKnown RBP17.1■□□□□ 0.33
CCDC57-216ENST00000582885 NRXN3Q9Y4C0 1643 aa17.09■□□□□ 0.33
CCDC57-216ENST00000582885 IQGAP1P46940 1657 aa17.08■□□□□ 0.32
CCDC57-216ENST00000582885 GPRASP1Q5JY77 1395 aa17.08■□□□□ 0.32
CCDC57-216ENST00000582885 SCAF11Q99590 1463 aaKnown RBP17.06■□□□□ 0.32
CCDC57-216ENST00000582885 C14orf93Q9H972 538 aaKnown RBP17.06■□□□□ 0.32
CCDC57-216ENST00000582885 EID1Q9Y6B2 187 aa17.06■□□□□ 0.32
CCDC57-216ENST00000582885 ALKQ9UM73 1620 aa17.06■□□□□ 0.32
CCDC57-216ENST00000582885 ROCK2O75116 1388 aaKnown RBP17.04■□□□□ 0.32
CCDC57-216ENST00000582885 PLEKHG1Q9ULL1 1385 aa17.04■□□□□ 0.32
CCDC57-216ENST00000582885 ADGRB1O14514 1584 aa17.03■□□□□ 0.32
CCDC57-216ENST00000582885 DIP2AQ14689 1571 aa17.03■□□□□ 0.32
CCDC57-216ENST00000582885 LTKP29376 864 aa17.03■□□□□ 0.32
CCDC57-216ENST00000582885 NUTM2DQ5VT03 806 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-216ENST00000582885 TXNDC2Q86VQ3 553 aa17.03■□□□□ 0.32
CCDC57-216ENST00000582885 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
CCDC57-216ENST00000582885 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
CCDC57-216ENST00000582885 CFAP70Q5T0N1 1121 aa17.01■□□□□ 0.31
CCDC57-216ENST00000582885 ANKLE2Q86XL3 938 aa17.01■□□□□ 0.31
CCDC57-216ENST00000582885 MED14O60244 1454 aa17■□□□□ 0.31
CCDC57-216ENST00000582885 CARD11Q9BXL7 1154 aa16.99■□□□□ 0.31
CCDC57-216ENST00000582885 ASXL1Q8IXJ9 1541 aa16.99■□□□□ 0.31
CCDC57-216ENST00000582885 KNDC1Q76NI1 1749 aa16.99■□□□□ 0.31
CCDC57-216ENST00000582885 ADAMTS13Q76LX8 1427 aa16.98■□□□□ 0.31
CCDC57-216ENST00000582885 EIF4G2P78344 907 aaKnown RBP eCLIP16.98■□□□□ 0.31
CCDC57-216ENST00000582885 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
CCDC57-216ENST00000582885 STRCQ7RTU9 1775 aa16.97■□□□□ 0.31
CCDC57-216ENST00000582885 USP47Q96K76 1375 aa16.97■□□□□ 0.31
CCDC57-216ENST00000582885 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.3
CCDC57-216ENST00000582885 TBX22Q9Y458 520 aa16.94■□□□□ 0.3
CCDC57-216ENST00000582885 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
CCDC57-216ENST00000582885 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
CCDC57-216ENST00000582885 EIF3AQ14152 1382 aaKnown RBP16.92■□□□□ 0.3
CCDC57-216ENST00000582885 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
CCDC57-216ENST00000582885 HSPA5P11021 654 aaKnown RBP16.92■□□□□ 0.3
CCDC57-216ENST00000582885 YTHDC2Q9H6S0 1430 aaKnown RBP16.92■□□□□ 0.3
CCDC57-216ENST00000582885 QRICH2Q9H0J4 1663 aa16.91■□□□□ 0.3
CCDC57-216ENST00000582885 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
CCDC57-216ENST00000582885 TMEM132EQ6IEE7 984 aa16.91■□□□□ 0.3
CCDC57-216ENST00000582885 BCANQ96GW7 911 aa16.91■□□□□ 0.3
CCDC57-216ENST00000582885 METP08581 1390 aa16.9■□□□□ 0.3
CCDC57-216ENST00000582885 LRPPRCP42704 1394 aaKnown RBP16.9■□□□□ 0.3
CCDC57-216ENST00000582885 XRN1Q8IZH2 1706 aaKnown RBP16.9■□□□□ 0.3
CCDC57-216ENST00000582885 TECPR2O15040 1411 aa16.9■□□□□ 0.3
CCDC57-216ENST00000582885 CPS1P31327 1500 aa16.9■□□□□ 0.3
CCDC57-216ENST00000582885 ABCC11Q96J66 1382 aa16.89■□□□□ 0.3
CCDC57-216ENST00000582885 NCKAP5LQ9HCH0 1330 aa16.89■□□□□ 0.29
CCDC57-216ENST00000582885 SBNO2Q9Y2G9 1366 aa16.88■□□□□ 0.29
CCDC57-216ENST00000582885 ST20-MTHFSA0A0A6YYL1 179 aa16.87■□□□□ 0.29
CCDC57-216ENST00000582885 HSPA2P54652 639 aa16.87■□□□□ 0.29
CCDC57-216ENST00000582885 SIRT1Q96EB6 747 aa16.87■□□□□ 0.29
CCDC57-216ENST00000582885 SLC26A8Q96RN1 970 aa16.87■□□□□ 0.29
CCDC57-216ENST00000582885 SLC24A1O60721 1099 aa16.86■□□□□ 0.29
CCDC57-216ENST00000582885 SENP3Q9H4L4 574 aaPredicted RBP16.86■□□□□ 0.29
CCDC57-216ENST00000582885 FAM135BQ49AJ0 1406 aa16.86■□□□□ 0.29
CCDC57-216ENST00000582885 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
CCDC57-216ENST00000582885 TRAK1Q9UPV9 953 aa16.85■□□□□ 0.29
CCDC57-216ENST00000582885 PTPRUQ92729 1446 aa16.84■□□□□ 0.29
CCDC57-216ENST00000582885 TESK2Q96S53 571 aa16.83■□□□□ 0.28
CCDC57-216ENST00000582885 HIRIP3Q9BW71 556 aaPredicted RBP16.83■□□□□ 0.28
CCDC57-216ENST00000582885 CENPJQ9HC77 1338 aaPredicted RBP16.83■□□□□ 0.28
CCDC57-216ENST00000582885 PTCH1Q13635 1447 aa16.82■□□□□ 0.28
CCDC57-216ENST00000582885 STK26Q9P289 416 aa16.82■□□□□ 0.28
CCDC57-216ENST00000582885 STRCP1A6NGW2 1772 aa16.8■□□□□ 0.28
CCDC57-216ENST00000582885 AMOTL2Q9Y2J4 779 aa16.8■□□□□ 0.28
CCDC57-216ENST00000582885 DMRT2Q9Y5R5 561 aa16.78■□□□□ 0.28
CCDC57-216ENST00000582885 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.78■□□□□ 0.28
CCDC57-216ENST00000582885 ADGRB2O60241 1585 aa16.77■□□□□ 0.28
CCDC57-216ENST00000582885 KCNA6P17658 529 aa16.77■□□□□ 0.28
CCDC57-216ENST00000582885 TMF1P82094 1093 aa16.77■□□□□ 0.28
CCDC57-216ENST00000582885 PRAM1Q96QH2 718 aa16.77■□□□□ 0.28
CCDC57-216ENST00000582885 POGKQ9P215 609 aa16.77■□□□□ 0.28
CCDC57-216ENST00000582885 NKTRP30414 1462 aaKnown RBP16.77■□□□□ 0.28
CCDC57-216ENST00000582885 CCDC7Q96M83 1385 aa16.77■□□□□ 0.27
CCDC57-216ENST00000582885 ROBO2Q9HCK4 1378 aa16.77■□□□□ 0.27
CCDC57-216ENST00000582885 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms