RNA–Protein interactions for RNA: ENST00000582648.5

ERBB2-211, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5

Gene ERBB2, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-211ENST00000582648 CPS1P31327 1500 aa26.89■■□□□ 1.89
ERBB2-211ENST00000582648 PPP1R15AO75807 674 aaPredicted RBP26.88■■□□□ 1.89
ERBB2-211ENST00000582648 RAB3GAP2Q9H2M9 1393 aa26.87■■□□□ 1.89
ERBB2-211ENST00000582648 FOXD1Q16676 465 aa26.87■■□□□ 1.89
ERBB2-211ENST00000582648 KIF1BO60333 1816 aa26.87■■□□□ 1.89
ERBB2-211ENST00000582648 IQSEC2Q5JU85 1478 aa26.87■■□□□ 1.89
ERBB2-211ENST00000582648 NUTM2DQ5VT03 806 aaPredicted RBP26.86■■□□□ 1.89
ERBB2-211ENST00000582648 BCANQ96GW7 911 aa26.85■■□□□ 1.89
ERBB2-211ENST00000582648 SLC26A8Q96RN1 970 aa26.82■■□□□ 1.88
ERBB2-211ENST00000582648 MPHOSPH9Q99550 1183 aa26.81■■□□□ 1.88
ERBB2-211ENST00000582648 PLEKHG1Q9ULL1 1385 aa26.81■■□□□ 1.88
ERBB2-211ENST00000582648 ZNF326Q5BKZ1 582 aaKnown RBP26.8■■□□□ 1.88
ERBB2-211ENST00000582648 HDGFP51858 240 aaKnown RBP26.78■■□□□ 1.88
ERBB2-211ENST00000582648 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
ERBB2-211ENST00000582648 NEXMIFQ5QGS0 1516 aa26.75■■□□□ 1.87
ERBB2-211ENST00000582648 LRRC7Q96NW7 1537 aa26.75■■□□□ 1.87
ERBB2-211ENST00000582648 UBAP1LF5GYI3 381 aa26.72■■□□□ 1.87
ERBB2-211ENST00000582648 CCDC144AA2RUR9 1427 aa26.72■■□□□ 1.87
ERBB2-211ENST00000582648 NWD1Q149M9 1564 aa26.71■■□□□ 1.87
ERBB2-211ENST00000582648 DIP2AQ14689 1571 aa26.71■■□□□ 1.87
ERBB2-211ENST00000582648 ACIN1Q9UKV3 1341 aaKnown RBP26.7■■□□□ 1.87
ERBB2-211ENST00000582648 XIRP1Q702N8 1843 aaKnown RBP26.7■■□□□ 1.87
ERBB2-211ENST00000582648 NRXN3Q9Y4C0 1643 aa26.7■■□□□ 1.86
ERBB2-211ENST00000582648 ADAMTS13Q76LX8 1427 aa26.7■■□□□ 1.86
ERBB2-211ENST00000582648 CHD2O14647 1828 aaKnown RBP26.68■■□□□ 1.86
ERBB2-211ENST00000582648 KCNA6P17658 529 aa26.66■■□□□ 1.86
ERBB2-211ENST00000582648 SETBP1Q9Y6X0 1596 aa26.66■■□□□ 1.86
ERBB2-211ENST00000582648 PPLO60437 1756 aa26.66■■□□□ 1.86
ERBB2-211ENST00000582648 NKTRP30414 1462 aaKnown RBP26.64■■□□□ 1.86
ERBB2-211ENST00000582648 TBX22Q9Y458 520 aa26.62■■□□□ 1.85
ERBB2-211ENST00000582648 SCAF1Q9H7N4 1312 aaKnown RBP26.62■■□□□ 1.85
ERBB2-211ENST00000582648 RBM33Q96EV2 1170 aaKnown RBP26.61■■□□□ 1.85
ERBB2-211ENST00000582648 ALKQ9UM73 1620 aa26.61■■□□□ 1.85
ERBB2-211ENST00000582648 TMEM94Q12767 1356 aa26.6■■□□□ 1.85
ERBB2-211ENST00000582648 PIP4K2BP78356 416 aa26.59■■□□□ 1.85
ERBB2-211ENST00000582648 SPATA31E1Q6ZUB1 1445 aa26.58■■□□□ 1.85
ERBB2-211ENST00000582648 PROSER2Q86WR7 435 aaPredicted RBP26.58■■□□□ 1.85
ERBB2-211ENST00000582648 IFT172Q9UG01 1749 aa26.58■■□□□ 1.85
ERBB2-211ENST00000582648 TOM1O60784 492 aa26.57■■□□□ 1.84
ERBB2-211ENST00000582648 RGL3Q3MIN7 710 aa26.57■■□□□ 1.84
ERBB2-211ENST00000582648 HRCP23327 699 aa26.56■■□□□ 1.84
ERBB2-211ENST00000582648 RPGRIP1LQ68CZ1 1315 aa26.55■■□□□ 1.84
ERBB2-211ENST00000582648 PIK3R4Q99570 1358 aa26.55■■□□□ 1.84
ERBB2-211ENST00000582648 PTPRUQ92729 1446 aa26.55■■□□□ 1.84
ERBB2-211ENST00000582648 SETD1AO15047 1707 aaKnown RBP26.54■■□□□ 1.84
ERBB2-211ENST00000582648 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
ERBB2-211ENST00000582648 VGFO15240 615 aaPredicted RBP26.53■■□□□ 1.84
ERBB2-211ENST00000582648 METP08581 1390 aa26.53■■□□□ 1.84
ERBB2-211ENST00000582648 ANKRD30BQ9BXX2 1392 aa26.51■■□□□ 1.83
ERBB2-211ENST00000582648 AMOTL2Q9Y2J4 779 aa26.49■■□□□ 1.83
ERBB2-211ENST00000582648 ADGRF5Q8IZF2 1346 aa26.46■■□□□ 1.83
ERBB2-211ENST00000582648 MSH6P52701 1360 aa26.46■■□□□ 1.83
ERBB2-211ENST00000582648 C14orf37Q86TY3 774 aa26.45■■□□□ 1.82
ERBB2-211ENST00000582648 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.4■■□□□ 1.82
ERBB2-211ENST00000582648 PIK3C2GO75747 1445 aa26.39■■□□□ 1.82
ERBB2-211ENST00000582648 HSPA1LP34931 641 aa26.39■■□□□ 1.82
ERBB2-211ENST00000582648 MYOM2P54296 1465 aa26.38■■□□□ 1.81
ERBB2-211ENST00000582648 ROBO1Q9Y6N7 1651 aa26.38■■□□□ 1.81
ERBB2-211ENST00000582648 ASXL1Q8IXJ9 1541 aa26.37■■□□□ 1.81
ERBB2-211ENST00000582648 NCOA3Q9Y6Q9 1424 aa26.37■■□□□ 1.81
ERBB2-211ENST00000582648 NALCNQ8IZF0 1738 aa26.36■■□□□ 1.81
ERBB2-211ENST00000582648 PTCH1Q13635 1447 aa26.34■■□□□ 1.81
ERBB2-211ENST00000582648 TRIM26Q12899 539 aaPredicted RBP26.34■■□□□ 1.81
ERBB2-211ENST00000582648 NRXN1Q9ULB1 1477 aa26.34■■□□□ 1.81
ERBB2-211ENST00000582648 ROBO2Q9HCK4 1378 aa26.33■■□□□ 1.8
ERBB2-211ENST00000582648 LAMC1P11047 1609 aa26.32■■□□□ 1.8
ERBB2-211ENST00000582648 C19orf44Q9H6X5 657 aa26.3■■□□□ 1.8
ERBB2-211ENST00000582648 FAM135BQ49AJ0 1406 aa26.29■■□□□ 1.8
ERBB2-211ENST00000582648 ADGRL3Q9HAR2 1447 aa26.29■■□□□ 1.8
ERBB2-211ENST00000582648 ATF3P18847 181 aa26.28■■□□□ 1.8
ERBB2-211ENST00000582648 TMEM132EQ6IEE7 984 aa26.28■■□□□ 1.8
ERBB2-211ENST00000582648 KDM2AQ9Y2K7 1162 aa26.28■■□□□ 1.8
ERBB2-211ENST00000582648 PRAG1Q86YV5 1406 aa26.28■■□□□ 1.8
ERBB2-211ENST00000582648 KNDC1Q76NI1 1749 aa26.28■■□□□ 1.8
ERBB2-211ENST00000582648 DCAF11Q8TEB1 546 aa26.27■■□□□ 1.8
ERBB2-211ENST00000582648 SLAIN2Q9P270 581 aa26.27■■□□□ 1.8
ERBB2-211ENST00000582648 STK26Q9P289 416 aa26.27■■□□□ 1.8
ERBB2-211ENST00000582648 DCCP43146 1447 aa26.26■■□□□ 1.79
ERBB2-211ENST00000582648 CADPS2Q86UW7 1296 aa26.26■■□□□ 1.79
ERBB2-211ENST00000582648 CFAP70Q5T0N1 1121 aa26.25■■□□□ 1.79
ERBB2-211ENST00000582648 LRPPRCP42704 1394 aaKnown RBP26.24■■□□□ 1.79
ERBB2-211ENST00000582648 DHX57Q6P158 1386 aaKnown RBP26.24■■□□□ 1.79
ERBB2-211ENST00000582648 YTHDC2Q9H6S0 1430 aaKnown RBP26.22■■□□□ 1.79
ERBB2-211ENST00000582648 C14orf93Q9H972 538 aaKnown RBP26.22■■□□□ 1.79
ERBB2-211ENST00000582648 PHLPP1O60346 1717 aa26.22■■□□□ 1.79
ERBB2-211ENST00000582648 TECPR2O15040 1411 aa26.22■■□□□ 1.79
ERBB2-211ENST00000582648 MST1RQ04912 1400 aa26.2■■□□□ 1.78
ERBB2-211ENST00000582648 ABCC11Q96J66 1382 aa26.17■■□□□ 1.78
ERBB2-211ENST00000582648 PLEKHH1Q9ULM0 1364 aa26.17■■□□□ 1.78
ERBB2-211ENST00000582648 ADGRB1O14514 1584 aa26.16■■□□□ 1.78
ERBB2-211ENST00000582648 WAPLQ7Z5K2 1190 aa26.16■■□□□ 1.78
ERBB2-211ENST00000582648 DISP3Q9P2K9 1392 aa26.16■■□□□ 1.78
ERBB2-211ENST00000582648 SIN3AQ96ST3 1273 aa26.15■■□□□ 1.78
ERBB2-211ENST00000582648 MED1Q15648 1581 aaPredicted RBP26.15■■□□□ 1.78
ERBB2-211ENST00000582648 CDC42BPGQ6DT37 1551 aa26.14■■□□□ 1.78
ERBB2-211ENST00000582648 COL16A1Q07092 1604 aaPredicted RBP26.13■■□□□ 1.77
ERBB2-211ENST00000582648 BRINP3Q76B58 766 aa26.12■■□□□ 1.77
ERBB2-211ENST00000582648 AHDC1Q5TGY3 1603 aaPredicted RBP26.12■■□□□ 1.77
ERBB2-211ENST00000582648 NEUROD1Q13562 356 aa26.11■■□□□ 1.77
ERBB2-211ENST00000582648 STAC3Q96MF2 364 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 205.8 ms