RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 TXNDC2Q86VQ3 553 aa15.37■□□□□ 0.05
TOP3A-212ENST00000582122 SCAF11Q99590 1463 aaKnown RBP15.37■□□□□ 0.05
TOP3A-212ENST00000582122 MED1Q15648 1581 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-212ENST00000582122 CHGAP10645 457 aaKnown RBP15.36■□□□□ 0.05
TOP3A-212ENST00000582122 SCAF1Q9H7N4 1312 aaKnown RBP15.36■□□□□ 0.05
TOP3A-212ENST00000582122 NEURL4Q96JN8 1562 aa15.35■□□□□ 0.05
TOP3A-212ENST00000582122 NPHP4O75161 1426 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-212ENST00000582122 TMEM131LA2VDJ0 1609 aa15.33■□□□□ 0.04
TOP3A-212ENST00000582122 HSPA1LP34931 641 aa15.33■□□□□ 0.04
TOP3A-212ENST00000582122 CCDC144AA2RUR9 1427 aa15.33■□□□□ 0.04
TOP3A-212ENST00000582122 PIP4K2BP78356 416 aa15.32■□□□□ 0.04
TOP3A-212ENST00000582122 PPP1R15AO75807 674 aaPredicted RBP15.31■□□□□ 0.04
TOP3A-212ENST00000582122 RPGRIP1LQ68CZ1 1315 aa15.31■□□□□ 0.04
TOP3A-212ENST00000582122 LTKP29376 864 aa15.3■□□□□ 0.04
TOP3A-212ENST00000582122 RIMS2Q9UQ26 1411 aa15.3■□□□□ 0.04
TOP3A-212ENST00000582122 ZFYVE9O95405 1425 aa15.29■□□□□ 0.04
TOP3A-212ENST00000582122 ZNF326Q5BKZ1 582 aaKnown RBP15.29■□□□□ 0.04
TOP3A-212ENST00000582122 KIF1BO60333 1816 aa15.29■□□□□ 0.04
TOP3A-212ENST00000582122 IQGAP1P46940 1657 aa15.28■□□□□ 0.04
TOP3A-212ENST00000582122 PLEKHG1Q9ULL1 1385 aa15.28■□□□□ 0.04
TOP3A-212ENST00000582122 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
TOP3A-212ENST00000582122 CLTCL1P53675 1640 aa15.28■□□□□ 0.04
TOP3A-212ENST00000582122 VGFO15240 615 aaPredicted RBP15.27■□□□□ 0.04
TOP3A-212ENST00000582122 FOXD1Q16676 465 aa15.26■□□□□ 0.03
TOP3A-212ENST00000582122 BCANQ96GW7 911 aa15.26■□□□□ 0.03
TOP3A-212ENST00000582122 MYO5BQ9ULV0 1848 aa15.24■□□□□ 0.03
TOP3A-212ENST00000582122 ANKRD30BQ9BXX2 1392 aa15.24■□□□□ 0.03
TOP3A-212ENST00000582122 STAC3Q96MF2 364 aa15.23■□□□□ 0.03
TOP3A-212ENST00000582122 TBX22Q9Y458 520 aa15.23■□□□□ 0.03
TOP3A-212ENST00000582122 ALKQ9UM73 1620 aa15.21■□□□□ 0.03
TOP3A-212ENST00000582122 DIP2AQ14689 1571 aa15.21■□□□□ 0.03
TOP3A-212ENST00000582122 PIK3R4Q99570 1358 aa15.21■□□□□ 0.02
TOP3A-212ENST00000582122 SPATA31E1Q6ZUB1 1445 aa15.2■□□□□ 0.02
TOP3A-212ENST00000582122 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
TOP3A-212ENST00000582122 KCNA6P17658 529 aa15.19■□□□□ 0.02
TOP3A-212ENST00000582122 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
TOP3A-212ENST00000582122 SLC26A8Q96RN1 970 aa15.18■□□□□ 0.02
TOP3A-212ENST00000582122 SETBP1Q9Y6X0 1596 aa15.17■□□□□ 0.02
TOP3A-212ENST00000582122 RGL3Q3MIN7 710 aa15.17■□□□□ 0.02
TOP3A-212ENST00000582122 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
TOP3A-212ENST00000582122 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
TOP3A-212ENST00000582122 NKTRP30414 1462 aaKnown RBP15.14■□□□□ 0.01
TOP3A-212ENST00000582122 STRCP1A6NGW2 1772 aa15.13■□□□□ 0.01
TOP3A-212ENST00000582122 PPLO60437 1756 aa15.13■□□□□ 0.01
TOP3A-212ENST00000582122 NCOA3Q9Y6Q9 1424 aa15.11■□□□□ 0.01
TOP3A-212ENST00000582122 MYOM2P54296 1465 aa15.11■□□□□ 0.01
TOP3A-212ENST00000582122 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
TOP3A-212ENST00000582122 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
TOP3A-212ENST00000582122 PROSER2Q86WR7 435 aaPredicted RBP15.1■□□□□ 0.01
TOP3A-212ENST00000582122 CHD2O14647 1828 aaKnown RBP15.09■□□□□ 0.01
TOP3A-212ENST00000582122 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
TOP3A-212ENST00000582122 SENP3Q9H4L4 574 aaPredicted RBP15.08■□□□□ 0
TOP3A-212ENST00000582122 AMOTL2Q9Y2J4 779 aa15.08■□□□□ 0
TOP3A-212ENST00000582122 ADGRF5Q8IZF2 1346 aa15.08■□□□□ 0
TOP3A-212ENST00000582122 IFT172Q9UG01 1749 aa15.08■□□□□ 0
TOP3A-212ENST00000582122 NRXN3Q9Y4C0 1643 aa15.07■□□□□ 0
TOP3A-212ENST00000582122 DCAF11Q8TEB1 546 aa15.07■□□□□ 0
TOP3A-212ENST00000582122 PIK3C2GO75747 1445 aa15.07■□□□□ 0
TOP3A-212ENST00000582122 NRXN1Q9ULB1 1477 aa15.06■□□□□ 0
TOP3A-212ENST00000582122 C14orf93Q9H972 538 aaKnown RBP15.05■□□□□ -0
TOP3A-212ENST00000582122 CLSPNQ9HAW4 1339 aa15.05■□□□□ -0
TOP3A-212ENST00000582122 METP08581 1390 aa15.05■□□□□ -0
TOP3A-212ENST00000582122 TMEM94Q12767 1356 aa15.05■□□□□ -0
TOP3A-212ENST00000582122 FAM135BQ49AJ0 1406 aa15.05■□□□□ -0
TOP3A-212ENST00000582122 LAMC1P11047 1609 aa15.04■□□□□ -0
TOP3A-212ENST00000582122 PRAG1Q86YV5 1406 aa15.04■□□□□ -0
TOP3A-212ENST00000582122 MSH6P52701 1360 aa15.03■□□□□ -0
TOP3A-212ENST00000582122 PTCH1Q13635 1447 aa15.02■□□□□ -0
TOP3A-212ENST00000582122 RGS17Q9UGC6 210 aaPredicted RBP15.02■□□□□ -0
TOP3A-212ENST00000582122 KDM2AQ9Y2K7 1162 aa15.02■□□□□ -0
TOP3A-212ENST00000582122 PTPRUQ92729 1446 aa15.01□□□□□ -0.01
TOP3A-212ENST00000582122 C14orf37Q86TY3 774 aa15.01□□□□□ -0.01
TOP3A-212ENST00000582122 C19orf44Q9H6X5 657 aa15.01□□□□□ -0.01
TOP3A-212ENST00000582122 XRN1Q8IZH2 1706 aaKnown RBP15□□□□□ -0.01
TOP3A-212ENST00000582122 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
TOP3A-212ENST00000582122 ABCC11Q96J66 1382 aa15□□□□□ -0.01
TOP3A-212ENST00000582122 SIRT1Q96EB6 747 aa15□□□□□ -0.01
TOP3A-212ENST00000582122 XIRP1Q702N8 1843 aaKnown RBP15□□□□□ -0.01
TOP3A-212ENST00000582122 SETD1AO15047 1707 aaKnown RBP15□□□□□ -0.01
TOP3A-212ENST00000582122 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
TOP3A-212ENST00000582122 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
TOP3A-212ENST00000582122 ATF3P18847 181 aa14.98□□□□□ -0.01
TOP3A-212ENST00000582122 CFAP70Q5T0N1 1121 aa14.98□□□□□ -0.01
TOP3A-212ENST00000582122 SIN3AQ96ST3 1273 aa14.98□□□□□ -0.01
TOP3A-212ENST00000582122 TECPR2O15040 1411 aa14.98□□□□□ -0.01
TOP3A-212ENST00000582122 DCCP43146 1447 aa14.98□□□□□ -0.01
TOP3A-212ENST00000582122 L3MBTL2Q969R5 705 aa14.97□□□□□ -0.01
TOP3A-212ENST00000582122 YTHDC2Q9H6S0 1430 aaKnown RBP14.97□□□□□ -0.01
TOP3A-212ENST00000582122 TONSLQ96HA7 1378 aa14.97□□□□□ -0.01
TOP3A-212ENST00000582122 TIMELESSQ9UNS1 1208 aa14.96□□□□□ -0.01
TOP3A-212ENST00000582122 ROBO1Q9Y6N7 1651 aa14.96□□□□□ -0.01
TOP3A-212ENST00000582122 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
TOP3A-212ENST00000582122 TMEM132EQ6IEE7 984 aa14.94□□□□□ -0.02
TOP3A-212ENST00000582122 STK26Q9P289 416 aa14.94□□□□□ -0.02
TOP3A-212ENST00000582122 ROBO2Q9HCK4 1378 aa14.94□□□□□ -0.02
TOP3A-212ENST00000582122 KNDC1Q76NI1 1749 aa14.93□□□□□ -0.02
TOP3A-212ENST00000582122 KIAA1210Q9ULL0 1709 aa14.93□□□□□ -0.02
TOP3A-212ENST00000582122 POTEAQ6S8J7 498 aa14.93□□□□□ -0.02
TOP3A-212ENST00000582122 RBM33Q96EV2 1170 aaKnown RBP14.92□□□□□ -0.02
TOP3A-212ENST00000582122 SLAIN2Q9P270 581 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms