RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 STRCP1A6NGW2 1772 aa18.91■□□□□ 0.62
CDK5RAP3-222ENST00000581708 MYO5BQ9ULV0 1848 aa18.91■□□□□ 0.62
CDK5RAP3-222ENST00000581708 PPP1R15AO75807 674 aaPredicted RBP18.9■□□□□ 0.62
CDK5RAP3-222ENST00000581708 KCNA6P17658 529 aa18.89■□□□□ 0.61
CDK5RAP3-222ENST00000581708 TRPM2O94759 1503 aa18.89■□□□□ 0.61
CDK5RAP3-222ENST00000581708 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
CDK5RAP3-222ENST00000581708 TRIM52Q96A61 297 aa18.87■□□□□ 0.61
CDK5RAP3-222ENST00000581708 TBX22Q9Y458 520 aa18.87■□□□□ 0.61
CDK5RAP3-222ENST00000581708 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
CDK5RAP3-222ENST00000581708 SLC26A8Q96RN1 970 aa18.86■□□□□ 0.61
CDK5RAP3-222ENST00000581708 DIP2AQ14689 1571 aa18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 NWD1Q149M9 1564 aa18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 BCANQ96GW7 911 aa18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 SLC4A1APQ9BWU0 796 aaKnown RBP18.85■□□□□ 0.61
CDK5RAP3-222ENST00000581708 PIK3R4Q99570 1358 aa18.84■□□□□ 0.61
CDK5RAP3-222ENST00000581708 CLTCL1P53675 1640 aa18.81■□□□□ 0.6
CDK5RAP3-222ENST00000581708 CHD2O14647 1828 aaKnown RBP18.8■□□□□ 0.6
CDK5RAP3-222ENST00000581708 KIF1BO60333 1816 aa18.8■□□□□ 0.6
CDK5RAP3-222ENST00000581708 ADAMTS13Q76LX8 1427 aa18.8■□□□□ 0.6
CDK5RAP3-222ENST00000581708 XIRP1Q702N8 1843 aaKnown RBP18.79■□□□□ 0.6
CDK5RAP3-222ENST00000581708 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
CDK5RAP3-222ENST00000581708 NCOA3Q9Y6Q9 1424 aa18.79■□□□□ 0.6
CDK5RAP3-222ENST00000581708 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 ZNF326Q5BKZ1 582 aaKnown RBP18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 PROSER2Q86WR7 435 aaPredicted RBP18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 TMEM94Q12767 1356 aa18.78■□□□□ 0.6
CDK5RAP3-222ENST00000581708 SETBP1Q9Y6X0 1596 aa18.77■□□□□ 0.6
CDK5RAP3-222ENST00000581708 SETD5Q9C0A6 1442 aa18.77■□□□□ 0.6
CDK5RAP3-222ENST00000581708 RPGRIP1LQ68CZ1 1315 aa18.76■□□□□ 0.59
CDK5RAP3-222ENST00000581708 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
CDK5RAP3-222ENST00000581708 NEXMIFQ5QGS0 1516 aa18.74■□□□□ 0.59
CDK5RAP3-222ENST00000581708 MPHOSPH9Q99550 1183 aa18.74■□□□□ 0.59
CDK5RAP3-222ENST00000581708 VGFO15240 615 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-222ENST00000581708 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
CDK5RAP3-222ENST00000581708 MSH6P52701 1360 aa18.72■□□□□ 0.59
CDK5RAP3-222ENST00000581708 FAM135BQ49AJ0 1406 aa18.72■□□□□ 0.59
CDK5RAP3-222ENST00000581708 HRCP23327 699 aa18.71■□□□□ 0.59
CDK5RAP3-222ENST00000581708 HSPA1LP34931 641 aa18.71■□□□□ 0.59
CDK5RAP3-222ENST00000581708 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
CDK5RAP3-222ENST00000581708 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.58
CDK5RAP3-222ENST00000581708 AMOTL2Q9Y2J4 779 aa18.67■□□□□ 0.58
CDK5RAP3-222ENST00000581708 RAB3GAP2Q9H2M9 1393 aa18.67■□□□□ 0.58
CDK5RAP3-222ENST00000581708 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
CDK5RAP3-222ENST00000581708 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
CDK5RAP3-222ENST00000581708 C19orf44Q9H6X5 657 aa18.65■□□□□ 0.58
CDK5RAP3-222ENST00000581708 DISP3Q9P2K9 1392 aa18.65■□□□□ 0.58
CDK5RAP3-222ENST00000581708 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
CDK5RAP3-222ENST00000581708 PPLO60437 1756 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 FOXD1Q16676 465 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 ANKRD30BQ9BXX2 1392 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SPATA31E1Q6ZUB1 1445 aa18.64■□□□□ 0.57
CDK5RAP3-222ENST00000581708 CADPS2Q86UW7 1296 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SLAIN2Q9P270 581 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 METP08581 1390 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 DCCP43146 1447 aa18.63■□□□□ 0.57
CDK5RAP3-222ENST00000581708 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
CDK5RAP3-222ENST00000581708 PRAG1Q86YV5 1406 aa18.62■□□□□ 0.57
CDK5RAP3-222ENST00000581708 C14orf37Q86TY3 774 aa18.61■□□□□ 0.57
CDK5RAP3-222ENST00000581708 ATF3P18847 181 aa18.6■□□□□ 0.57
CDK5RAP3-222ENST00000581708 ROBO1Q9Y6N7 1651 aa18.6■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SETD1AO15047 1707 aaKnown RBP18.58■□□□□ 0.57
CDK5RAP3-222ENST00000581708 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.58■□□□□ 0.57
CDK5RAP3-222ENST00000581708 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
CDK5RAP3-222ENST00000581708 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
CDK5RAP3-222ENST00000581708 MED1Q15648 1581 aaPredicted RBP18.55■□□□□ 0.56
CDK5RAP3-222ENST00000581708 RGL3Q3MIN7 710 aa18.54■□□□□ 0.56
CDK5RAP3-222ENST00000581708 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
CDK5RAP3-222ENST00000581708 ADGRF5Q8IZF2 1346 aa18.52■□□□□ 0.56
CDK5RAP3-222ENST00000581708 STAC3Q96MF2 364 aa18.52■□□□□ 0.56
CDK5RAP3-222ENST00000581708 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
CDK5RAP3-222ENST00000581708 MYOM2P54296 1465 aa18.51■□□□□ 0.55
CDK5RAP3-222ENST00000581708 TECPR2O15040 1411 aa18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 PHLPP1O60346 1717 aa18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 AHDC1Q5TGY3 1603 aaPredicted RBP18.49■□□□□ 0.55
CDK5RAP3-222ENST00000581708 ROBO2Q9HCK4 1378 aa18.48■□□□□ 0.55
CDK5RAP3-222ENST00000581708 MST1RQ04912 1400 aa18.48■□□□□ 0.55
CDK5RAP3-222ENST00000581708 LAMC1P11047 1609 aa18.47■□□□□ 0.55
CDK5RAP3-222ENST00000581708 NALCNQ8IZF0 1738 aa18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 LRPPRCP42704 1394 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 ABCC11Q96J66 1382 aa18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 JCADQ9P266 1359 aa18.46■□□□□ 0.55
CDK5RAP3-222ENST00000581708 BRINP3Q76B58 766 aa18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 SIRT1Q96EB6 747 aa18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 COL16A1Q07092 1604 aaPredicted RBP18.45■□□□□ 0.54
CDK5RAP3-222ENST00000581708 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 ILDR2Q71H61 639 aa18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
CDK5RAP3-222ENST00000581708 CDC42BPGQ6DT37 1551 aa18.41■□□□□ 0.54
CDK5RAP3-222ENST00000581708 SPATA31A6Q5VVP1 1343 aa18.41■□□□□ 0.54
CDK5RAP3-222ENST00000581708 DHX57Q6P158 1386 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-222ENST00000581708 YTHDC2Q9H6S0 1430 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-222ENST00000581708 C1orf167Q5SNV9 1468 aa18.4■□□□□ 0.54
CDK5RAP3-222ENST00000581708 NHSL1Q5SYE7 1610 aa18.39■□□□□ 0.53
CDK5RAP3-222ENST00000581708 SOCS7O14512 581 aa18.38■□□□□ 0.53
CDK5RAP3-222ENST00000581708 SHPRHQ149N8 1683 aa18.38■□□□□ 0.53
CDK5RAP3-222ENST00000581708 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
CDK5RAP3-222ENST00000581708 STK26Q9P289 416 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms