RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 FBXO41Q8TF61 875 aa18.79■□□□□ 0.6
SNORD55-201ENST00000581525 PLEKHG1Q9ULL1 1385 aa18.79■□□□□ 0.6
SNORD55-201ENST00000581525 CLTCL1P53675 1640 aa18.76■□□□□ 0.59
SNORD55-201ENST00000581525 CHGAP10645 457 aaKnown RBP18.76■□□□□ 0.59
SNORD55-201ENST00000581525 MYO5BQ9ULV0 1848 aa18.75■□□□□ 0.59
SNORD55-201ENST00000581525 FOXD1Q16676 465 aa18.75■□□□□ 0.59
SNORD55-201ENST00000581525 CPS1P31327 1500 aa18.74■□□□□ 0.59
SNORD55-201ENST00000581525 ILDR1Q86SU0 546 aaPredicted RBP18.74■□□□□ 0.59
SNORD55-201ENST00000581525 TBX22Q9Y458 520 aa18.74■□□□□ 0.59
SNORD55-201ENST00000581525 RPGRIP1LQ68CZ1 1315 aa18.73■□□□□ 0.59
SNORD55-201ENST00000581525 KCNA6P17658 529 aa18.7■□□□□ 0.58
SNORD55-201ENST00000581525 ADAMTS13Q76LX8 1427 aa18.7■□□□□ 0.58
SNORD55-201ENST00000581525 SPATA31E1Q6ZUB1 1445 aa18.69■□□□□ 0.58
SNORD55-201ENST00000581525 SLC26A8Q96RN1 970 aa18.69■□□□□ 0.58
SNORD55-201ENST00000581525 ANKRD30BQ9BXX2 1392 aa18.68■□□□□ 0.58
SNORD55-201ENST00000581525 CCDC144AA2RUR9 1427 aa18.68■□□□□ 0.58
SNORD55-201ENST00000581525 PIK3R4Q99570 1358 aa18.68■□□□□ 0.58
SNORD55-201ENST00000581525 PPP1R15AO75807 674 aaPredicted RBP18.67■□□□□ 0.58
SNORD55-201ENST00000581525 ZNF326Q5BKZ1 582 aaKnown RBP18.67■□□□□ 0.58
SNORD55-201ENST00000581525 NEXMIFQ5QGS0 1516 aa18.67■□□□□ 0.58
SNORD55-201ENST00000581525 STRCP1A6NGW2 1772 aa18.67■□□□□ 0.58
SNORD55-201ENST00000581525 KIF1BO60333 1816 aa18.67■□□□□ 0.58
SNORD55-201ENST00000581525 LRRC7Q96NW7 1537 aa18.66■□□□□ 0.58
SNORD55-201ENST00000581525 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
SNORD55-201ENST00000581525 SETBP1Q9Y6X0 1596 aa18.65■□□□□ 0.58
SNORD55-201ENST00000581525 NUTM2DQ5VT03 806 aaPredicted RBP18.65■□□□□ 0.58
SNORD55-201ENST00000581525 DIP2AQ14689 1571 aa18.64■□□□□ 0.58
SNORD55-201ENST00000581525 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
SNORD55-201ENST00000581525 NWD1Q149M9 1564 aa18.62■□□□□ 0.57
SNORD55-201ENST00000581525 NRXN3Q9Y4C0 1643 aa18.6■□□□□ 0.57
SNORD55-201ENST00000581525 BCANQ96GW7 911 aa18.6■□□□□ 0.57
SNORD55-201ENST00000581525 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
SNORD55-201ENST00000581525 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
SNORD55-201ENST00000581525 NCOA3Q9Y6Q9 1424 aa18.58■□□□□ 0.57
SNORD55-201ENST00000581525 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
SNORD55-201ENST00000581525 PPLO60437 1756 aa18.56■□□□□ 0.56
SNORD55-201ENST00000581525 RGL3Q3MIN7 710 aa18.56■□□□□ 0.56
SNORD55-201ENST00000581525 STAC3Q96MF2 364 aa18.56■□□□□ 0.56
SNORD55-201ENST00000581525 METP08581 1390 aa18.55■□□□□ 0.56
SNORD55-201ENST00000581525 ADGRF5Q8IZF2 1346 aa18.55■□□□□ 0.56
SNORD55-201ENST00000581525 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
SNORD55-201ENST00000581525 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
SNORD55-201ENST00000581525 TMEM94Q12767 1356 aa18.55■□□□□ 0.56
SNORD55-201ENST00000581525 UBAP1LF5GYI3 381 aa18.54■□□□□ 0.56
SNORD55-201ENST00000581525 TOM1O60784 492 aa18.54■□□□□ 0.56
SNORD55-201ENST00000581525 ALKQ9UM73 1620 aa18.53■□□□□ 0.56
SNORD55-201ENST00000581525 PRAG1Q86YV5 1406 aa18.53■□□□□ 0.56
SNORD55-201ENST00000581525 NRXN1Q9ULB1 1477 aa18.52■□□□□ 0.56
SNORD55-201ENST00000581525 XIRP1Q702N8 1843 aaKnown RBP18.52■□□□□ 0.56
SNORD55-201ENST00000581525 SENP3Q9H4L4 574 aaPredicted RBP18.52■□□□□ 0.56
SNORD55-201ENST00000581525 IFT172Q9UG01 1749 aa18.52■□□□□ 0.55
SNORD55-201ENST00000581525 MYOM2P54296 1465 aa18.5■□□□□ 0.55
SNORD55-201ENST00000581525 PIK3C2GO75747 1445 aa18.49■□□□□ 0.55
SNORD55-201ENST00000581525 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
SNORD55-201ENST00000581525 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
SNORD55-201ENST00000581525 DHX57Q6P158 1386 aaKnown RBP18.48■□□□□ 0.55
SNORD55-201ENST00000581525 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
SNORD55-201ENST00000581525 C19orf44Q9H6X5 657 aa18.45■□□□□ 0.54
SNORD55-201ENST00000581525 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
SNORD55-201ENST00000581525 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
SNORD55-201ENST00000581525 PTCH1Q13635 1447 aa18.43■□□□□ 0.54
SNORD55-201ENST00000581525 FAM135BQ49AJ0 1406 aa18.43■□□□□ 0.54
SNORD55-201ENST00000581525 SIRT1Q96EB6 747 aa18.43■□□□□ 0.54
SNORD55-201ENST00000581525 MSH6P52701 1360 aa18.42■□□□□ 0.54
SNORD55-201ENST00000581525 TECPR2O15040 1411 aa18.42■□□□□ 0.54
SNORD55-201ENST00000581525 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
SNORD55-201ENST00000581525 LRPPRCP42704 1394 aaKnown RBP18.41■□□□□ 0.54
SNORD55-201ENST00000581525 DCCP43146 1447 aa18.4■□□□□ 0.54
SNORD55-201ENST00000581525 ROBO2Q9HCK4 1378 aa18.4■□□□□ 0.54
SNORD55-201ENST00000581525 CFAP70Q5T0N1 1121 aa18.39■□□□□ 0.53
SNORD55-201ENST00000581525 SLAIN2Q9P270 581 aa18.39■□□□□ 0.53
SNORD55-201ENST00000581525 ASXL1Q8IXJ9 1541 aa18.39■□□□□ 0.53
SNORD55-201ENST00000581525 PIP4K2BP78356 416 aa18.38■□□□□ 0.53
SNORD55-201ENST00000581525 CADPS2Q86UW7 1296 aa18.38■□□□□ 0.53
SNORD55-201ENST00000581525 TMEM132EQ6IEE7 984 aa18.37■□□□□ 0.53
SNORD55-201ENST00000581525 YTHDC2Q9H6S0 1430 aaKnown RBP18.36■□□□□ 0.53
SNORD55-201ENST00000581525 ADGRL3Q9HAR2 1447 aa18.36■□□□□ 0.53
SNORD55-201ENST00000581525 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
SNORD55-201ENST00000581525 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
SNORD55-201ENST00000581525 LAMC1P11047 1609 aa18.34■□□□□ 0.53
SNORD55-201ENST00000581525 ATF3P18847 181 aa18.34■□□□□ 0.53
SNORD55-201ENST00000581525 HSPA1LP34931 641 aa18.34■□□□□ 0.53
SNORD55-201ENST00000581525 KDM2AQ9Y2K7 1162 aa18.34■□□□□ 0.53
SNORD55-201ENST00000581525 ADGRB1O14514 1584 aa18.34■□□□□ 0.53
SNORD55-201ENST00000581525 L3MBTL2Q969R5 705 aa18.32■□□□□ 0.52
SNORD55-201ENST00000581525 C14orf37Q86TY3 774 aa18.31■□□□□ 0.52
SNORD55-201ENST00000581525 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
SNORD55-201ENST00000581525 SCAF1Q9H7N4 1312 aaKnown RBP18.3■□□□□ 0.52
SNORD55-201ENST00000581525 STK26Q9P289 416 aa18.3■□□□□ 0.52
SNORD55-201ENST00000581525 DLC1Q96QB1 1528 aa18.29■□□□□ 0.52
SNORD55-201ENST00000581525 WAPLQ7Z5K2 1190 aa18.29■□□□□ 0.52
SNORD55-201ENST00000581525 MST1RQ04912 1400 aa18.29■□□□□ 0.52
SNORD55-201ENST00000581525 NALCNQ8IZF0 1738 aa18.26■□□□□ 0.51
SNORD55-201ENST00000581525 BRINP3Q76B58 766 aa18.26■□□□□ 0.51
SNORD55-201ENST00000581525 PLEKHH1Q9ULM0 1364 aa18.26■□□□□ 0.51
SNORD55-201ENST00000581525 ROBO1Q9Y6N7 1651 aa18.25■□□□□ 0.51
SNORD55-201ENST00000581525 NEUROD1Q13562 356 aa18.25■□□□□ 0.51
SNORD55-201ENST00000581525 PCGF6Q9BYE7 350 aa18.25■□□□□ 0.51
SNORD55-201ENST00000581525 KIAA1210Q9ULL0 1709 aa18.25■□□□□ 0.51
SNORD55-201ENST00000581525 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms