RNA–Protein interactions for RNA: ENST00000581055.1

TOP2A-205, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 4

Gene TOP2A, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-205ENST00000581055 CCDC144AA2RUR9 1427 aa26.68■■□□□ 1.86
TOP2A-205ENST00000581055 ZNF335Q9H4Z2 1342 aaPredicted RBP26.67■■□□□ 1.86
TOP2A-205ENST00000581055 BCANQ96GW7 911 aa26.67■■□□□ 1.86
TOP2A-205ENST00000581055 CLTCL1P53675 1640 aa26.65■■□□□ 1.86
TOP2A-205ENST00000581055 CERKQ8TCT0 537 aa26.65■■□□□ 1.86
TOP2A-205ENST00000581055 IQGAP1P46940 1657 aa26.65■■□□□ 1.86
TOP2A-205ENST00000581055 PLEKHG1Q9ULL1 1385 aa26.63■■□□□ 1.85
TOP2A-205ENST00000581055 NUTM2DQ5VT03 806 aaPredicted RBP26.61■■□□□ 1.85
TOP2A-205ENST00000581055 RPGRIP1LQ68CZ1 1315 aa26.61■■□□□ 1.85
TOP2A-205ENST00000581055 SLC26A8Q96RN1 970 aa26.59■■□□□ 1.85
TOP2A-205ENST00000581055 LTBP4Q8N2S1 1624 aa26.58■■□□□ 1.85
TOP2A-205ENST00000581055 VGFO15240 615 aaPredicted RBP26.56■■□□□ 1.84
TOP2A-205ENST00000581055 ANKRD30BQ9BXX2 1392 aa26.56■■□□□ 1.84
TOP2A-205ENST00000581055 MYO5BQ9ULV0 1848 aa26.54■■□□□ 1.84
TOP2A-205ENST00000581055 SENP3Q9H4L4 574 aaPredicted RBP26.54■■□□□ 1.84
TOP2A-205ENST00000581055 TBX22Q9Y458 520 aa26.54■■□□□ 1.84
TOP2A-205ENST00000581055 CPS1P31327 1500 aa26.53■■□□□ 1.84
TOP2A-205ENST00000581055 KIF1BO60333 1816 aa26.52■■□□□ 1.84
TOP2A-205ENST00000581055 RGL3Q3MIN7 710 aa26.52■■□□□ 1.84
TOP2A-205ENST00000581055 SPATA31E1Q6ZUB1 1445 aa26.51■■□□□ 1.83
TOP2A-205ENST00000581055 NEXMIFQ5QGS0 1516 aa26.49■■□□□ 1.83
TOP2A-205ENST00000581055 KCNA6P17658 529 aa26.49■■□□□ 1.83
TOP2A-205ENST00000581055 IQSEC2Q5JU85 1478 aa26.49■■□□□ 1.83
TOP2A-205ENST00000581055 FBXO41Q8TF61 875 aa26.48■■□□□ 1.83
TOP2A-205ENST00000581055 ADAMTS13Q76LX8 1427 aa26.47■■□□□ 1.83
TOP2A-205ENST00000581055 PIK3R4Q99570 1358 aa26.45■■□□□ 1.82
TOP2A-205ENST00000581055 DIP2AQ14689 1571 aa26.44■■□□□ 1.82
TOP2A-205ENST00000581055 SETBP1Q9Y6X0 1596 aa26.41■■□□□ 1.82
TOP2A-205ENST00000581055 LRRC7Q96NW7 1537 aa26.38■■□□□ 1.81
TOP2A-205ENST00000581055 PROSER2Q86WR7 435 aaPredicted RBP26.37■■□□□ 1.81
TOP2A-205ENST00000581055 ADGRF5Q8IZF2 1346 aa26.37■■□□□ 1.81
TOP2A-205ENST00000581055 ILDR1Q86SU0 546 aaPredicted RBP26.36■■□□□ 1.81
TOP2A-205ENST00000581055 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
TOP2A-205ENST00000581055 STAC3Q96MF2 364 aa26.35■■□□□ 1.81
TOP2A-205ENST00000581055 AMOTL2Q9Y2J4 779 aa26.34■■□□□ 1.81
TOP2A-205ENST00000581055 DHX57Q6P158 1386 aaKnown RBP26.33■■□□□ 1.81
TOP2A-205ENST00000581055 UBAP1LF5GYI3 381 aa26.33■■□□□ 1.81
TOP2A-205ENST00000581055 PCGF6Q9BYE7 350 aa26.33■■□□□ 1.81
TOP2A-205ENST00000581055 NWD1Q149M9 1564 aa26.33■■□□□ 1.8
TOP2A-205ENST00000581055 METP08581 1390 aa26.33■■□□□ 1.8
TOP2A-205ENST00000581055 PPLO60437 1756 aa26.32■■□□□ 1.8
TOP2A-205ENST00000581055 TMEM94Q12767 1356 aa26.32■■□□□ 1.8
TOP2A-205ENST00000581055 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
TOP2A-205ENST00000581055 TOM1O60784 492 aa26.31■■□□□ 1.8
TOP2A-205ENST00000581055 STRCP1A6NGW2 1772 aa26.3■■□□□ 1.8
TOP2A-205ENST00000581055 DCAF11Q8TEB1 546 aa26.3■■□□□ 1.8
TOP2A-205ENST00000581055 MYOM2P54296 1465 aa26.29■■□□□ 1.8
TOP2A-205ENST00000581055 PTPRUQ92729 1446 aa26.28■■□□□ 1.8
TOP2A-205ENST00000581055 PIK3C2GO75747 1445 aa26.27■■□□□ 1.8
TOP2A-205ENST00000581055 ALKQ9UM73 1620 aa26.27■■□□□ 1.8
TOP2A-205ENST00000581055 KDM2AQ9Y2K7 1162 aa26.26■■□□□ 1.79
TOP2A-205ENST00000581055 NCOA3Q9Y6Q9 1424 aa26.25■■□□□ 1.79
TOP2A-205ENST00000581055 RBM33Q96EV2 1170 aaKnown RBP26.25■■□□□ 1.79
TOP2A-205ENST00000581055 NRXN1Q9ULB1 1477 aa26.24■■□□□ 1.79
TOP2A-205ENST00000581055 CHD2O14647 1828 aaKnown RBP26.24■■□□□ 1.79
TOP2A-205ENST00000581055 C14orf93Q9H972 538 aaKnown RBP26.24■■□□□ 1.79
TOP2A-205ENST00000581055 C14orf37Q86TY3 774 aa26.23■■□□□ 1.79
TOP2A-205ENST00000581055 IFT172Q9UG01 1749 aa26.22■■□□□ 1.79
TOP2A-205ENST00000581055 MSH6P52701 1360 aa26.21■■□□□ 1.79
TOP2A-205ENST00000581055 SIN3AQ96ST3 1273 aa26.21■■□□□ 1.79
TOP2A-205ENST00000581055 NEUROD1Q13562 356 aa26.2■■□□□ 1.78
TOP2A-205ENST00000581055 CFAP70Q5T0N1 1121 aa26.18■■□□□ 1.78
TOP2A-205ENST00000581055 PIP4K2BP78356 416 aa26.17■■□□□ 1.78
TOP2A-205ENST00000581055 C19orf44Q9H6X5 657 aa26.17■■□□□ 1.78
TOP2A-205ENST00000581055 SCAF1Q9H7N4 1312 aaKnown RBP26.16■■□□□ 1.78
TOP2A-205ENST00000581055 TMEM132EQ6IEE7 984 aa26.16■■□□□ 1.78
TOP2A-205ENST00000581055 XRN1Q8IZH2 1706 aaKnown RBP26.16■■□□□ 1.78
TOP2A-205ENST00000581055 PTCH1Q13635 1447 aa26.15■■□□□ 1.78
TOP2A-205ENST00000581055 PRAG1Q86YV5 1406 aa26.15■■□□□ 1.78
TOP2A-205ENST00000581055 LRPPRCP42704 1394 aaKnown RBP26.15■■□□□ 1.78
TOP2A-205ENST00000581055 STK26Q9P289 416 aa26.14■■□□□ 1.78
TOP2A-205ENST00000581055 SETD1AO15047 1707 aaKnown RBP26.13■■□□□ 1.77
TOP2A-205ENST00000581055 ABCC11Q96J66 1382 aa26.12■■□□□ 1.77
TOP2A-205ENST00000581055 ROBO2Q9HCK4 1378 aa26.12■■□□□ 1.77
TOP2A-205ENST00000581055 ATF3P18847 181 aa26.12■■□□□ 1.77
TOP2A-205ENST00000581055 CADPS2Q86UW7 1296 aa26.12■■□□□ 1.77
TOP2A-205ENST00000581055 L3MBTL2Q969R5 705 aa26.12■■□□□ 1.77
TOP2A-205ENST00000581055 YTHDC2Q9H6S0 1430 aaKnown RBP26.1■■□□□ 1.77
TOP2A-205ENST00000581055 LAMC1P11047 1609 aa26.1■■□□□ 1.77
TOP2A-205ENST00000581055 TECPR2O15040 1411 aa26.09■■□□□ 1.77
TOP2A-205ENST00000581055 SIRT1Q96EB6 747 aa26.08■■□□□ 1.77
TOP2A-205ENST00000581055 SLAIN2Q9P270 581 aa26.08■■□□□ 1.77
TOP2A-205ENST00000581055 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
TOP2A-205ENST00000581055 ASXL1Q8IXJ9 1541 aa26.06■■□□□ 1.76
TOP2A-205ENST00000581055 DCCP43146 1447 aa26.05■■□□□ 1.76
TOP2A-205ENST00000581055 ADGRL3Q9HAR2 1447 aa26.05■■□□□ 1.76
TOP2A-205ENST00000581055 TONSLQ96HA7 1378 aa26.04■■□□□ 1.76
TOP2A-205ENST00000581055 WAPLQ7Z5K2 1190 aa26.02■■□□□ 1.76
TOP2A-205ENST00000581055 CLSPNQ9HAW4 1339 aa26.02■■□□□ 1.76
TOP2A-205ENST00000581055 FAM135BQ49AJ0 1406 aa26.02■■□□□ 1.76
TOP2A-205ENST00000581055 ADGRB1O14514 1584 aa26■■□□□ 1.75
TOP2A-205ENST00000581055 POGKQ9P215 609 aa25.98■■□□□ 1.75
TOP2A-205ENST00000581055 TRAK1Q9UPV9 953 aa25.98■■□□□ 1.75
TOP2A-205ENST00000581055 HSPA1LP34931 641 aa25.97■■□□□ 1.75
TOP2A-205ENST00000581055 PRAM1Q96QH2 718 aa25.97■■□□□ 1.75
TOP2A-205ENST00000581055 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.96■■□□□ 1.75
TOP2A-205ENST00000581055 CCER1Q8TC90 406 aaPredicted RBP25.95■■□□□ 1.74
TOP2A-205ENST00000581055 PLEKHH1Q9ULM0 1364 aa25.95■■□□□ 1.74
TOP2A-205ENST00000581055 KNDC1Q76NI1 1749 aa25.94■■□□□ 1.74
TOP2A-205ENST00000581055 DLC1Q96QB1 1528 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms