RNA–Protein interactions for RNA: ENST00000581014.1

CDC42EP4-206, Transcript of CDC42 effector protein 4, humanhuman

TSL 5 BASIC

Gene CDC42EP4, Length 737 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-206ENST00000581014 TOM1O60784 492 aa25.59■■□□□ 1.69
CDC42EP4-206ENST00000581014 RIMS2Q9UQ26 1411 aa25.58■■□□□ 1.69
CDC42EP4-206ENST00000581014 PIP4K2BP78356 416 aa25.58■■□□□ 1.69
CDC42EP4-206ENST00000581014 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.58■■□□□ 1.69
CDC42EP4-206ENST00000581014 PLEKHG1Q9ULL1 1385 aa25.57■■□□□ 1.68
CDC42EP4-206ENST00000581014 KCNA6P17658 529 aa25.56■■□□□ 1.68
CDC42EP4-206ENST00000581014 SLC26A8Q96RN1 970 aa25.55■■□□□ 1.68
CDC42EP4-206ENST00000581014 CHGAP10645 457 aaKnown RBP25.53■■□□□ 1.68
CDC42EP4-206ENST00000581014 PPP1R15AO75807 674 aaPredicted RBP25.51■■□□□ 1.67
CDC42EP4-206ENST00000581014 TBX22Q9Y458 520 aa25.51■■□□□ 1.67
CDC42EP4-206ENST00000581014 HSPA1LP34931 641 aa25.5■■□□□ 1.67
CDC42EP4-206ENST00000581014 ILDR2Q71H61 639 aa25.49■■□□□ 1.67
CDC42EP4-206ENST00000581014 TRIM52Q96A61 297 aa25.48■■□□□ 1.67
CDC42EP4-206ENST00000581014 MED1Q15648 1581 aaPredicted RBP25.48■■□□□ 1.67
CDC42EP4-206ENST00000581014 BCANQ96GW7 911 aa25.47■■□□□ 1.67
CDC42EP4-206ENST00000581014 NWD1Q149M9 1564 aa25.46■■□□□ 1.67
CDC42EP4-206ENST00000581014 TRPM2O94759 1503 aa25.45■■□□□ 1.66
CDC42EP4-206ENST00000581014 SPHKAPQ2M3C7 1700 aa25.45■■□□□ 1.66
CDC42EP4-206ENST00000581014 SLC4A1APQ9BWU0 796 aaKnown RBP25.44■■□□□ 1.66
CDC42EP4-206ENST00000581014 NKTRP30414 1462 aaKnown RBP25.44■■□□□ 1.66
CDC42EP4-206ENST00000581014 ADAMTS13Q76LX8 1427 aa25.44■■□□□ 1.66
CDC42EP4-206ENST00000581014 TMEM94Q12767 1356 aa25.44■■□□□ 1.66
CDC42EP4-206ENST00000581014 ACIN1Q9UKV3 1341 aaKnown RBP25.43■■□□□ 1.66
CDC42EP4-206ENST00000581014 PIK3R4Q99570 1358 aa25.42■■□□□ 1.66
CDC42EP4-206ENST00000581014 CHD2O14647 1828 aaKnown RBP25.41■■□□□ 1.66
CDC42EP4-206ENST00000581014 NUTM2DQ5VT03 806 aaPredicted RBP25.4■■□□□ 1.66
CDC42EP4-206ENST00000581014 PROSER2Q86WR7 435 aaPredicted RBP25.4■■□□□ 1.66
CDC42EP4-206ENST00000581014 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
CDC42EP4-206ENST00000581014 CLTCL1P53675 1640 aa25.37■■□□□ 1.65
CDC42EP4-206ENST00000581014 ZNF326Q5BKZ1 582 aaKnown RBP25.36■■□□□ 1.65
CDC42EP4-206ENST00000581014 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
CDC42EP4-206ENST00000581014 NCOA3Q9Y6Q9 1424 aa25.35■■□□□ 1.65
CDC42EP4-206ENST00000581014 MPHOSPH9Q99550 1183 aa25.33■■□□□ 1.65
CDC42EP4-206ENST00000581014 SETD5Q9C0A6 1442 aa25.32■■□□□ 1.64
CDC42EP4-206ENST00000581014 ROBO1Q9Y6N7 1651 aa25.32■■□□□ 1.64
CDC42EP4-206ENST00000581014 SETBP1Q9Y6X0 1596 aa25.31■■□□□ 1.64
CDC42EP4-206ENST00000581014 RPGRIP1LQ68CZ1 1315 aa25.31■■□□□ 1.64
CDC42EP4-206ENST00000581014 FAM135BQ49AJ0 1406 aa25.3■■□□□ 1.64
CDC42EP4-206ENST00000581014 NEXMIFQ5QGS0 1516 aa25.3■■□□□ 1.64
CDC42EP4-206ENST00000581014 SOCS7O14512 581 aa25.29■■□□□ 1.64
CDC42EP4-206ENST00000581014 RBM33Q96EV2 1170 aaKnown RBP25.29■■□□□ 1.64
CDC42EP4-206ENST00000581014 MSH6P52701 1360 aa25.28■■□□□ 1.64
CDC42EP4-206ENST00000581014 VGFO15240 615 aaPredicted RBP25.27■■□□□ 1.64
CDC42EP4-206ENST00000581014 AMOTL2Q9Y2J4 779 aa25.27■■□□□ 1.64
CDC42EP4-206ENST00000581014 FOXD1Q16676 465 aa25.26■■□□□ 1.63
CDC42EP4-206ENST00000581014 PTPRUQ92729 1446 aa25.26■■□□□ 1.63
CDC42EP4-206ENST00000581014 NRXN3Q9Y4C0 1643 aa25.26■■□□□ 1.63
CDC42EP4-206ENST00000581014 KIF1BO60333 1816 aa25.25■■□□□ 1.63
CDC42EP4-206ENST00000581014 CCDC144AA2RUR9 1427 aa25.22■■□□□ 1.63
CDC42EP4-206ENST00000581014 METP08581 1390 aa25.22■■□□□ 1.63
CDC42EP4-206ENST00000581014 C19orf44Q9H6X5 657 aa25.22■■□□□ 1.63
CDC42EP4-206ENST00000581014 SLAIN2Q9P270 581 aa25.21■■□□□ 1.63
CDC42EP4-206ENST00000581014 RAB3GAP2Q9H2M9 1393 aa25.2■■□□□ 1.63
CDC42EP4-206ENST00000581014 HRCP23327 699 aa25.2■■□□□ 1.62
CDC42EP4-206ENST00000581014 PHLPP1O60346 1717 aa25.19■■□□□ 1.62
CDC42EP4-206ENST00000581014 SPATA31E1Q6ZUB1 1445 aa25.19■■□□□ 1.62
CDC42EP4-206ENST00000581014 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
CDC42EP4-206ENST00000581014 CADPS2Q86UW7 1296 aa25.17■■□□□ 1.62
CDC42EP4-206ENST00000581014 PHF23Q9BUL5 403 aaPredicted RBP25.17■■□□□ 1.62
CDC42EP4-206ENST00000581014 XRN1Q8IZH2 1706 aaKnown RBP25.16■■□□□ 1.62
CDC42EP4-206ENST00000581014 C14orf37Q86TY3 774 aa25.15■■□□□ 1.62
CDC42EP4-206ENST00000581014 DCCP43146 1447 aa25.12■■□□□ 1.61
CDC42EP4-206ENST00000581014 PRAG1Q86YV5 1406 aa25.12■■□□□ 1.61
CDC42EP4-206ENST00000581014 ATF3P18847 181 aa25.12■■□□□ 1.61
CDC42EP4-206ENST00000581014 ANKRD30BQ9BXX2 1392 aa25.12■■□□□ 1.61
CDC42EP4-206ENST00000581014 RGL3Q3MIN7 710 aa25.08■■□□□ 1.61
CDC42EP4-206ENST00000581014 COL16A1Q07092 1604 aaPredicted RBP25.08■■□□□ 1.6
CDC42EP4-206ENST00000581014 PTCH1Q13635 1447 aa25.07■■□□□ 1.6
CDC42EP4-206ENST00000581014 PPLO60437 1756 aa25.07■■□□□ 1.6
CDC42EP4-206ENST00000581014 ADGRF5Q8IZF2 1346 aa25.07■■□□□ 1.6
CDC42EP4-206ENST00000581014 SETD1AO15047 1707 aaKnown RBP25.05■■□□□ 1.6
CDC42EP4-206ENST00000581014 ADGRL3Q9HAR2 1447 aa25.04■■□□□ 1.6
CDC42EP4-206ENST00000581014 NALCNQ8IZF0 1738 aa25.03■■□□□ 1.6
CDC42EP4-206ENST00000581014 ROBO2Q9HCK4 1378 aa25.02■■□□□ 1.6
CDC42EP4-206ENST00000581014 AHDC1Q5TGY3 1603 aaPredicted RBP25.01■■□□□ 1.59
CDC42EP4-206ENST00000581014 PIK3C2GO75747 1445 aa25■■□□□ 1.59
CDC42EP4-206ENST00000581014 BRINP3Q76B58 766 aa24.99■■□□□ 1.59
CDC42EP4-206ENST00000581014 MST1RQ04912 1400 aa24.98■■□□□ 1.59
CDC42EP4-206ENST00000581014 SHPRHQ149N8 1683 aa24.97■■□□□ 1.59
CDC42EP4-206ENST00000581014 NRXN1Q9ULB1 1477 aa24.96■■□□□ 1.59
CDC42EP4-206ENST00000581014 TECPR2O15040 1411 aa24.96■■□□□ 1.59
CDC42EP4-206ENST00000581014 IFT172Q9UG01 1749 aa24.96■■□□□ 1.59
CDC42EP4-206ENST00000581014 ABCC11Q96J66 1382 aa24.95■■□□□ 1.59
CDC42EP4-206ENST00000581014 JCADQ9P266 1359 aa24.95■■□□□ 1.59
CDC42EP4-206ENST00000581014 C14orf93Q9H972 538 aaKnown RBP24.95■■□□□ 1.58
CDC42EP4-206ENST00000581014 LRPPRCP42704 1394 aaKnown RBP24.94■■□□□ 1.58
CDC42EP4-206ENST00000581014 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
CDC42EP4-206ENST00000581014 MYOM2P54296 1465 aa24.94■■□□□ 1.58
CDC42EP4-206ENST00000581014 NHSL1Q5SYE7 1610 aa24.94■■□□□ 1.58
CDC42EP4-206ENST00000581014 ASXL1Q8IXJ9 1541 aa24.91■■□□□ 1.58
CDC42EP4-206ENST00000581014 STAC3Q96MF2 364 aa24.91■■□□□ 1.58
CDC42EP4-206ENST00000581014 SIRT1Q96EB6 747 aa24.9■■□□□ 1.58
CDC42EP4-206ENST00000581014 TMEM132EQ6IEE7 984 aa24.89■■□□□ 1.58
CDC42EP4-206ENST00000581014 C1orf167Q5SNV9 1468 aa24.88■■□□□ 1.57
CDC42EP4-206ENST00000581014 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
CDC42EP4-206ENST00000581014 YTHDC2Q9H6S0 1430 aaKnown RBP24.86■■□□□ 1.57
CDC42EP4-206ENST00000581014 LRP6O75581 1613 aa24.86■■□□□ 1.57
CDC42EP4-206ENST00000581014 STK26Q9P289 416 aa24.86■■□□□ 1.57
CDC42EP4-206ENST00000581014 CFAP70Q5T0N1 1121 aa24.85■■□□□ 1.57
CDC42EP4-206ENST00000581014 WAPLQ7Z5K2 1190 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms