RNA–Protein interactions for RNA: ENST00000580875.1

SNX11-207, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-207ENST00000580875 GCC2Q8IWJ2 1684 aa32.01■■■□□ 2.71
SNX11-207ENST00000580875 ZFYVE9O95405 1425 aa32■■■□□ 2.71
SNX11-207ENST00000580875 NKTRP30414 1462 aaKnown RBP31.99■■■□□ 2.71
SNX11-207ENST00000580875 HDGFP51858 240 aaKnown RBP31.99■■■□□ 2.71
SNX11-207ENST00000580875 FAM135BQ49AJ0 1406 aa31.99■■■□□ 2.71
SNX11-207ENST00000580875 NWD1Q149M9 1564 aa31.98■■■□□ 2.71
SNX11-207ENST00000580875 PLEKHG1Q9ULL1 1385 aa31.97■■■□□ 2.71
SNX11-207ENST00000580875 PPP1R15AO75807 674 aaPredicted RBP31.96■■■□□ 2.71
SNX11-207ENST00000580875 RIMS2Q9UQ26 1411 aa31.96■■■□□ 2.71
SNX11-207ENST00000580875 TMEM131LA2VDJ0 1609 aa31.96■■■□□ 2.71
SNX11-207ENST00000580875 RBM33Q96EV2 1170 aaKnown RBP31.94■■■□□ 2.7
SNX11-207ENST00000580875 MYO5BQ9ULV0 1848 aa31.92■■■□□ 2.7
SNX11-207ENST00000580875 E9PCH4 1651 aa31.92■■■□□ 2.7
SNX11-207ENST00000580875 IQGAP3Q86VI3 1631 aa31.91■■■□□ 2.7
SNX11-207ENST00000580875 CHGAP10645 457 aaKnown RBP31.9■■■□□ 2.7
SNX11-207ENST00000580875 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.89■■■□□ 2.7
SNX11-207ENST00000580875 ITGAEP38570 1179 aa31.88■■■□□ 2.69
SNX11-207ENST00000580875 MSH6P52701 1360 aa31.88■■■□□ 2.69
SNX11-207ENST00000580875 NUP155O75694 1391 aa31.87■■■□□ 2.69
SNX11-207ENST00000580875 TBX22Q9Y458 520 aa31.86■■■□□ 2.69
SNX11-207ENST00000580875 ROBO1Q9Y6N7 1651 aa31.86■■■□□ 2.69
SNX11-207ENST00000580875 CHD2O14647 1828 aaKnown RBP31.83■■■□□ 2.69
SNX11-207ENST00000580875 PPARGC1BQ86YN6 1023 aaKnown RBP31.81■■■□□ 2.68
SNX11-207ENST00000580875 NUTM2DQ5VT03 806 aaPredicted RBP31.79■■■□□ 2.68
SNX11-207ENST00000580875 ADAMTS13Q76LX8 1427 aa31.79■■■□□ 2.68
SNX11-207ENST00000580875 SLAIN2Q9P270 581 aa31.79■■■□□ 2.68
SNX11-207ENST00000580875 DIP2AQ14689 1571 aa31.77■■■□□ 2.68
SNX11-207ENST00000580875 NCOA3Q9Y6Q9 1424 aa31.76■■■□□ 2.68
SNX11-207ENST00000580875 RGS17Q9UGC6 210 aaPredicted RBP31.76■■■□□ 2.67
SNX11-207ENST00000580875 PIK3R4Q99570 1358 aa31.74■■■□□ 2.67
SNX11-207ENST00000580875 C14orf37Q86TY3 774 aa31.71■■■□□ 2.67
SNX11-207ENST00000580875 TRPM2O94759 1503 aa31.68■■■□□ 2.66
SNX11-207ENST00000580875 PHLPP1O60346 1717 aa31.66■■■□□ 2.66
SNX11-207ENST00000580875 C19orf44Q9H6X5 657 aa31.65■■■□□ 2.66
SNX11-207ENST00000580875 SPHKAPQ2M3C7 1700 aa31.65■■■□□ 2.66
SNX11-207ENST00000580875 CADPS2Q86UW7 1296 aa31.64■■■□□ 2.66
SNX11-207ENST00000580875 AMOTL2Q9Y2J4 779 aa31.63■■■□□ 2.65
SNX11-207ENST00000580875 JCADQ9P266 1359 aa31.63■■■□□ 2.65
SNX11-207ENST00000580875 RRBP1Q9P2E9 1410 aaKnown RBP31.62■■■□□ 2.65
SNX11-207ENST00000580875 ATF3P18847 181 aa31.61■■■□□ 2.65
SNX11-207ENST00000580875 PTPRUQ92729 1446 aa31.6■■■□□ 2.65
SNX11-207ENST00000580875 ZNF326Q5BKZ1 582 aaKnown RBP31.6■■■□□ 2.65
SNX11-207ENST00000580875 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.6■■■□□ 2.65
SNX11-207ENST00000580875 SETBP1Q9Y6X0 1596 aa31.59■■■□□ 2.65
SNX11-207ENST00000580875 POTEAQ6S8J7 498 aa31.57■■■□□ 2.64
SNX11-207ENST00000580875 COL16A1Q07092 1604 aaPredicted RBP31.57■■■□□ 2.64
SNX11-207ENST00000580875 NRXN3Q9Y4C0 1643 aa31.57■■■□□ 2.64
SNX11-207ENST00000580875 NAIPQ13075 1403 aa31.55■■■□□ 2.64
SNX11-207ENST00000580875 XRN1Q8IZH2 1706 aaKnown RBP31.52■■■□□ 2.64
SNX11-207ENST00000580875 CLTCL1P53675 1640 aa31.51■■■□□ 2.63
SNX11-207ENST00000580875 AHDC1Q5TGY3 1603 aaPredicted RBP31.51■■■□□ 2.63
SNX11-207ENST00000580875 DCCP43146 1447 aa31.5■■■□□ 2.63
SNX11-207ENST00000580875 METP08581 1390 aa31.49■■■□□ 2.63
SNX11-207ENST00000580875 SPATA31A6Q5VVP1 1343 aa31.49■■■□□ 2.63
SNX11-207ENST00000580875 NEXMIFQ5QGS0 1516 aa31.47■■■□□ 2.63
SNX11-207ENST00000580875 BRINP3Q76B58 766 aa31.46■■■□□ 2.63
SNX11-207ENST00000580875 HFM1A2PYH4 1435 aa31.42■■■□□ 2.62
SNX11-207ENST00000580875 LRP6O75581 1613 aa31.42■■■□□ 2.62
SNX11-207ENST00000580875 TRIM52Q96A61 297 aa31.41■■■□□ 2.62
SNX11-207ENST00000580875 KIF1BO60333 1816 aa31.4■■■□□ 2.62
SNX11-207ENST00000580875 MST1RQ04912 1400 aa31.4■■■□□ 2.62
SNX11-207ENST00000580875 SHPRHQ149N8 1683 aa31.39■■■□□ 2.62
SNX11-207ENST00000580875 MEX3CQ5U5Q3 659 aaKnown RBP31.39■■■□□ 2.62
SNX11-207ENST00000580875 ASXL1Q8IXJ9 1541 aa31.39■■■□□ 2.61
SNX11-207ENST00000580875 ADGRL3Q9HAR2 1447 aa31.37■■■□□ 2.61
SNX11-207ENST00000580875 VGFO15240 615 aaPredicted RBP31.36■■■□□ 2.61
SNX11-207ENST00000580875 SLC4A1APQ9BWU0 796 aaKnown RBP31.34■■■□□ 2.61
SNX11-207ENST00000580875 ZNF772Q68DY9 489 aaPredicted RBP31.33■■■□□ 2.61
SNX11-207ENST00000580875 RPGRIP1LQ68CZ1 1315 aa31.31■■■□□ 2.6
SNX11-207ENST00000580875 SETD5Q9C0A6 1442 aa31.31■■■□□ 2.6
SNX11-207ENST00000580875 NHSL1Q5SYE7 1610 aa31.29■■■□□ 2.6
SNX11-207ENST00000580875 NALCNQ8IZF0 1738 aa31.29■■■□□ 2.6
SNX11-207ENST00000580875 PTCH1Q13635 1447 aa31.28■■■□□ 2.6
SNX11-207ENST00000580875 NUTM2BA6NNL0 878 aaPredicted RBP31.26■■■□□ 2.59
SNX11-207ENST00000580875 NUTM2EB1AL46 878 aaPredicted RBP31.26■■■□□ 2.59
SNX11-207ENST00000580875 NUTM2AQ8IVF1 878 aaPredicted RBP31.26■■■□□ 2.59
SNX11-207ENST00000580875 LRRC59Q96AG4 307 aaKnown RBP31.26■■■□□ 2.59
SNX11-207ENST00000580875 SETD1AO15047 1707 aaKnown RBP31.25■■■□□ 2.59
SNX11-207ENST00000580875 ROBO2Q9HCK4 1378 aa31.23■■■□□ 2.59
SNX11-207ENST00000580875 PRAG1Q86YV5 1406 aa31.22■■■□□ 2.59
SNX11-207ENST00000580875 C1orf167Q5SNV9 1468 aa31.21■■■□□ 2.59
SNX11-207ENST00000580875 DDX17Q92841 729 aaKnown RBP31.2■■■□□ 2.59
SNX11-207ENST00000580875 PPLO60437 1756 aa31.19■■■□□ 2.58
SNX11-207ENST00000580875 FOXD1Q16676 465 aa31.17■■■□□ 2.58
SNX11-207ENST00000580875 PNPLA6Q8IY17 1366 aa31.16■■■□□ 2.58
SNX11-207ENST00000580875 RXRBP28702 533 aa31.15■■■□□ 2.58
SNX11-207ENST00000580875 AFF2P51816 1311 aa31.14■■■□□ 2.58
SNX11-207ENST00000580875 CCDC144AA2RUR9 1427 aa31.14■■■□□ 2.58
SNX11-207ENST00000580875 LAMC1P11047 1609 aa31.11■■■□□ 2.57
SNX11-207ENST00000580875 ORAI2Q96SN7 254 aa31.1■■■□□ 2.57
SNX11-207ENST00000580875 C8orf37Q96NL8 207 aa31.09■■■□□ 2.57
SNX11-207ENST00000580875 CDK12Q9NYV4 1490 aaPredicted RBP31.08■■■□□ 2.57
SNX11-207ENST00000580875 SOS2Q07890 1332 aaPredicted RBP31.08■■■□□ 2.57
SNX11-207ENST00000580875 ADGRF5Q8IZF2 1346 aa31.08■■■□□ 2.57
SNX11-207ENST00000580875 MPHOSPH9Q99550 1183 aa31.08■■■□□ 2.57
SNX11-207ENST00000580875 SPATA31E1Q6ZUB1 1445 aa31.07■■■□□ 2.57
SNX11-207ENST00000580875 RGL3Q3MIN7 710 aa31.07■■■□□ 2.56
SNX11-207ENST00000580875 ANKRD30BQ9BXX2 1392 aa31.05■■■□□ 2.56
SNX11-207ENST00000580875 UPF1Q92900 1129 aaKnown RBP eCLIP31.04■■■□□ 2.56
SNX11-207ENST00000580875 CDC42BPGQ6DT37 1551 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms